RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 TRIM52Q96A61 297 aa11.3□□□□□ -0.6
SHPRH-208ENST00000520752 PNNQ9H307 717 aaKnown RBP11.3□□□□□ -0.6
SHPRH-208ENST00000520752 RSF1Q96T23 1441 aaPredicted RBP11.29□□□□□ -0.6
SHPRH-208ENST00000520752 ZBTB24O43167 697 aaPredicted RBP11.29□□□□□ -0.6
SHPRH-208ENST00000520752 RPIAP49247 311 aa11.29□□□□□ -0.6
SHPRH-208ENST00000520752 PLA2G2CQ5R387 149 aa11.29□□□□□ -0.6
SHPRH-208ENST00000520752 ZBBXA8MT70 800 aa11.28□□□□□ -0.6
SHPRH-208ENST00000520752 FRAT1Q92837 279 aaPredicted RBP11.28□□□□□ -0.6
SHPRH-208ENST00000520752 PTK2Q05397 1052 aa11.27□□□□□ -0.61
SHPRH-208ENST00000520752 NR1H3Q13133 447 aa11.27□□□□□ -0.61
SHPRH-208ENST00000520752 IPO4Q8TEX9 1081 aaKnown RBP11.27□□□□□ -0.61
SHPRH-208ENST00000520752 BAP1Q92560 729 aa11.27□□□□□ -0.61
SHPRH-208ENST00000520752 ZNF777Q9ULD5 760 aaPredicted RBP11.27□□□□□ -0.61
SHPRH-208ENST00000520752 A0A0G2JS52 829 aa11.26□□□□□ -0.61
SHPRH-208ENST00000520752 NAP1L5Q96NT1 182 aaPredicted RBP11.26□□□□□ -0.61
SHPRH-208ENST00000520752 FBXO45P0C2W1 286 aa11.25□□□□□ -0.61
SHPRH-208ENST00000520752 VAC14Q08AM6 782 aa11.25□□□□□ -0.61
SHPRH-208ENST00000520752 TRIM32Q13049 653 aa11.25□□□□□ -0.61
SHPRH-208ENST00000520752 SH3BP5LQ7L8J4 393 aa11.25□□□□□ -0.61
SHPRH-208ENST00000520752 ZNF511Q8NB15 262 aa11.25□□□□□ -0.61
SHPRH-208ENST00000520752 SMARCA2P51531 1590 aa11.24□□□□□ -0.61
SHPRH-208ENST00000520752 SOX11P35716 441 aa11.24□□□□□ -0.61
SHPRH-208ENST00000520752 NFKBIBQ15653 356 aa11.24□□□□□ -0.61
SHPRH-208ENST00000520752 B4GALNT3Q6L9W6 998 aa11.24□□□□□ -0.61
SHPRH-208ENST00000520752 SH3RF1Q7Z6J0 888 aa11.24□□□□□ -0.61
SHPRH-208ENST00000520752 SMAP1Q8IYB5 467 aaPredicted RBP11.24□□□□□ -0.61
SHPRH-208ENST00000520752 OCSTAMPQ9BR26 566 aa11.24□□□□□ -0.61
SHPRH-208ENST00000520752 POM121CA8CG34 1229 aa11.23□□□□□ -0.61
SHPRH-208ENST00000520752 CD2BP2O95400 341 aaKnown RBP11.23□□□□□ -0.61
SHPRH-208ENST00000520752 DDX10Q13206 875 aaKnown RBP11.23□□□□□ -0.61
SHPRH-208ENST00000520752 EMID1Q96A84 441 aaPredicted RBP11.23□□□□□ -0.61
SHPRH-208ENST00000520752 CEP164Q9UPV0 1460 aa11.23□□□□□ -0.61
SHPRH-208ENST00000520752 WNT7BP56706 349 aa11.22□□□□□ -0.61
SHPRH-208ENST00000520752 SH3BP2P78314 561 aa11.22□□□□□ -0.61
SHPRH-208ENST00000520752 LINC01559Q495D7 138 aa11.22□□□□□ -0.61
SHPRH-208ENST00000520752 LIAT1Q6ZQX7 453 aa11.22□□□□□ -0.61
SHPRH-208ENST00000520752 BPHLQ86WA6 291 aaPredicted RBP11.22□□□□□ -0.61
SHPRH-208ENST00000520752 ARHGAP9Q9BRR9 750 aa11.22□□□□□ -0.61
SHPRH-208ENST00000520752 C1orf115Q9H7X2 142 aa11.22□□□□□ -0.61
SHPRH-208ENST00000520752 PLSCR2Q9NRY7 297 aa11.22□□□□□ -0.61
SHPRH-208ENST00000520752 NAP1L2Q9ULW6 460 aaPredicted RBP11.22□□□□□ -0.61
SHPRH-208ENST00000520752 RNF123Q5XPI4 1314 aa11.21□□□□□ -0.61
SHPRH-208ENST00000520752 ARID3CA6NKF2 412 aa11.21□□□□□ -0.61
SHPRH-208ENST00000520752 TERF1P54274 439 aa11.21□□□□□ -0.61
SHPRH-208ENST00000520752 EIF4G2P78344 907 aaKnown RBP eCLIP11.21□□□□□ -0.61
SHPRH-208ENST00000520752 HNRNPUQ00839 825 aaKnown RBP eCLIP11.21□□□□□ -0.61
SHPRH-208ENST00000520752 CNGB1Q14028 1251 aaPredicted RBP11.21□□□□□ -0.61
SHPRH-208ENST00000520752 MTERF4Q7Z6M4 381 aaKnown RBP11.21□□□□□ -0.61
SHPRH-208ENST00000520752 ALG2Q9H553 416 aa11.21□□□□□ -0.61
SHPRH-208ENST00000520752 RRAGDQ9NQL2 400 aaPredicted RBP11.21□□□□□ -0.61
SHPRH-208ENST00000520752 LAS1LQ9Y4W2 734 aaKnown RBP11.21□□□□□ -0.61
SHPRH-208ENST00000520752 CANXP27824 592 aaKnown RBP11.2□□□□□ -0.62
SHPRH-208ENST00000520752 UTP14CQ5TAP6 766 aaKnown RBP11.2□□□□□ -0.62
SHPRH-208ENST00000520752 FOXJ1Q92949 421 aa11.2□□□□□ -0.62
SHPRH-208ENST00000520752 PEG3Q9GZU2 1588 aa11.2□□□□□ -0.62
SHPRH-208ENST00000520752 GOLGA3Q08378 1498 aa11.19□□□□□ -0.62
SHPRH-208ENST00000520752 ZBED9Q6R2W3 1325 aa11.19□□□□□ -0.62
SHPRH-208ENST00000520752 BRD2P25440 801 aaKnown RBP11.19□□□□□ -0.62
SHPRH-208ENST00000520752 SLC19A1P41440 591 aa11.19□□□□□ -0.62
SHPRH-208ENST00000520752 MCCD1P59942 119 aaPredicted RBP11.19□□□□□ -0.62
SHPRH-208ENST00000520752 HDGFL1Q5TGJ6 251 aa11.19□□□□□ -0.62
SHPRH-208ENST00000520752 SKOR1P84550 965 aa11.18□□□□□ -0.62
SHPRH-208ENST00000520752 C4orf48Q5BLP8 95 aa11.18□□□□□ -0.62
SHPRH-208ENST00000520752 ZBTB33Q86T24 672 aa11.18□□□□□ -0.62
SHPRH-208ENST00000520752 ADAM32Q8TC27 787 aa11.18□□□□□ -0.62
SHPRH-208ENST00000520752 ZNF592Q92610 1267 aa11.18□□□□□ -0.62
SHPRH-208ENST00000520752 GLMNQ92990 594 aa11.18□□□□□ -0.62
SHPRH-208ENST00000520752 VPS8Q8N3P4 1428 aa11.18□□□□□ -0.62
SHPRH-208ENST00000520752 AGERQ15109 404 aa11.17□□□□□ -0.62
SHPRH-208ENST00000520752 ADAMTS19Q8TE59 1207 aa11.17□□□□□ -0.62
SHPRH-208ENST00000520752 CALR3Q96L12 384 aaKnown RBP11.17□□□□□ -0.62
SHPRH-208ENST00000520752 SMG6Q86US8 1419 aaKnown RBP11.17□□□□□ -0.62
SHPRH-208ENST00000520752 ARID4BQ4LE39 1312 aaPredicted RBP11.16□□□□□ -0.62
SHPRH-208ENST00000520752 IRX6P78412 446 aaPredicted RBP11.16□□□□□ -0.62
SHPRH-208ENST00000520752 SEMA3FQ13275 785 aa11.16□□□□□ -0.62
SHPRH-208ENST00000520752 C1QTNF2Q9BXJ5 285 aa11.16□□□□□ -0.62
SHPRH-208ENST00000520752 BACH2Q9BYV9 841 aa11.16□□□□□ -0.62
SHPRH-208ENST00000520752 MAGEB6P1A0A0J9YX57 407 aa11.15□□□□□ -0.62
SHPRH-208ENST00000520752 VARSP26640 1264 aaKnown RBP11.15□□□□□ -0.62
SHPRH-208ENST00000520752 ERFEQ4G0M1 354 aa11.15□□□□□ -0.62
SHPRH-208ENST00000520752 DCAF11Q8TEB1 546 aa11.15□□□□□ -0.62
SHPRH-208ENST00000520752 V9GY48 417 aaPredicted RBP11.15□□□□□ -0.62
SHPRH-208ENST00000520752 SPRYD7Q5W111 196 aa11.14□□□□□ -0.63
SHPRH-208ENST00000520752 TRMT44Q8IYL2 757 aaKnown RBP11.14□□□□□ -0.63
SHPRH-208ENST00000520752 CARD14Q9BXL6 1004 aa11.14□□□□□ -0.63
SHPRH-208ENST00000520752 GTF2E1P29083 439 aaPredicted RBP11.13□□□□□ -0.63
SHPRH-208ENST00000520752 RC3H1Q5TC82 1133 aaKnown RBP11.13□□□□□ -0.63
SHPRH-208ENST00000520752 TAF3Q5VWG9 929 aa11.13□□□□□ -0.63
SHPRH-208ENST00000520752 SERPINA10Q9UK55 444 aa11.13□□□□□ -0.63
SHPRH-208ENST00000520752 ISY1Q9ULR0 285 aaKnown RBP11.13□□□□□ -0.63
SHPRH-208ENST00000520752 EIF4G1Q04637 1599 aaKnown RBP11.12□□□□□ -0.63
SHPRH-208ENST00000520752 RRBP1Q9P2E9 1410 aaKnown RBP11.12□□□□□ -0.63
SHPRH-208ENST00000520752 PCDHB9Q9Y5E1 797 aa11.12□□□□□ -0.63
SHPRH-208ENST00000520752 TNNT2P45379 298 aaPredicted RBP11.11□□□□□ -0.63
SHPRH-208ENST00000520752 ZNF598Q86UK7 904 aaKnown RBP11.11□□□□□ -0.63
SHPRH-208ENST00000520752 DZIP3Q86Y13 1208 aaKnown RBP11.11□□□□□ -0.63
SHPRH-208ENST00000520752 FAM174AQ8TBP5 190 aa11.11□□□□□ -0.63
SHPRH-208ENST00000520752 PRKD2Q9BZL6 878 aa11.11□□□□□ -0.63
SHPRH-208ENST00000520752 WNT7AO00755 349 aa11.1□□□□□ -0.63
SHPRH-208ENST00000520752 RGS3P49796 1198 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms