RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 EVA1CP58658 441 aa11.96□□□□□ -0.49
CSMD1-209ENST00000520630 BCL9O00512 1426 aa11.95□□□□□ -0.5
CSMD1-209ENST00000520630 CRB1P82279 1406 aa11.95□□□□□ -0.5
CSMD1-209ENST00000520630 EIF3AQ14152 1382 aaKnown RBP11.95□□□□□ -0.5
CSMD1-209ENST00000520630 MARCH10Q8NA82 808 aaPredicted RBP11.95□□□□□ -0.5
CSMD1-209ENST00000520630 NUDT16Q96DE0 195 aaKnown RBP11.95□□□□□ -0.5
CSMD1-209ENST00000520630 BCL11BQ9C0K0 894 aaPredicted RBP11.95□□□□□ -0.5
CSMD1-209ENST00000520630 SLIT3O75094 1523 aa11.95□□□□□ -0.5
CSMD1-209ENST00000520630 ACEP12821 1306 aa11.94□□□□□ -0.5
CSMD1-209ENST00000520630 MAP3K5Q99683 1374 aa11.93□□□□□ -0.5
CSMD1-209ENST00000520630 SLC15A2Q16348 729 aa11.93□□□□□ -0.5
CSMD1-209ENST00000520630 LY75O60449 1722 aa11.92□□□□□ -0.5
CSMD1-209ENST00000520630 TXNRD1Q16881 649 aa11.92□□□□□ -0.5
CSMD1-209ENST00000520630 LTN1O94822 1766 aa11.92□□□□□ -0.5
CSMD1-209ENST00000520630 AATKQ6ZMQ8 1374 aa11.92□□□□□ -0.5
CSMD1-209ENST00000520630 KIAA1210Q9ULL0 1709 aa11.91□□□□□ -0.5
CSMD1-209ENST00000520630 TRPM1Q7Z4N2 1603 aa11.91□□□□□ -0.5
CSMD1-209ENST00000520630 GCP02774 474 aa11.91□□□□□ -0.5
CSMD1-209ENST00000520630 MTFR1LQ9H019 292 aa11.91□□□□□ -0.5
CSMD1-209ENST00000520630 PLEKHG3A1L390 1219 aa11.9□□□□□ -0.5
CSMD1-209ENST00000520630 AXIN2Q9Y2T1 843 aa11.9□□□□□ -0.5
CSMD1-209ENST00000520630 QRICH2Q9H0J4 1663 aa11.9□□□□□ -0.5
CSMD1-209ENST00000520630 C11orf95C9JLR9 678 aaPredicted RBP11.89□□□□□ -0.51
CSMD1-209ENST00000520630 DDB1Q16531 1140 aa11.89□□□□□ -0.51
CSMD1-209ENST00000520630 ABTB2Q8N961 1025 aa11.89□□□□□ -0.51
CSMD1-209ENST00000520630 ARXQ96QS3 562 aa11.89□□□□□ -0.51
CSMD1-209ENST00000520630 CDK19Q9BWU1 502 aa11.89□□□□□ -0.51
CSMD1-209ENST00000520630 RGPD2P0DJD1 1756 aa11.88□□□□□ -0.51
CSMD1-209ENST00000520630 GIGYF1O75420 1035 aaPredicted RBP11.88□□□□□ -0.51
CSMD1-209ENST00000520630 TAF1LQ8IZX4 1826 aa11.88□□□□□ -0.51
CSMD1-209ENST00000520630 STK32BQ9NY57 414 aa11.87□□□□□ -0.51
CSMD1-209ENST00000520630 ZNF827Q17R98 1081 aa11.86□□□□□ -0.51
CSMD1-209ENST00000520630 CCDC61Q9Y6R9 512 aa11.85□□□□□ -0.51
CSMD1-209ENST00000520630 ABCC6O95255 1503 aa11.85□□□□□ -0.51
CSMD1-209ENST00000520630 WDR17Q8IZU2 1322 aa11.85□□□□□ -0.51
CSMD1-209ENST00000520630 USP54Q70EL1 1684 aa11.84□□□□□ -0.51
CSMD1-209ENST00000520630 DOT1LQ8TEK3 1739 aa11.84□□□□□ -0.51
CSMD1-209ENST00000520630 NLRP13Q86W25 1043 aa11.84□□□□□ -0.51
CSMD1-209ENST00000520630 NLGN2Q8NFZ4 835 aa11.84□□□□□ -0.51
CSMD1-209ENST00000520630 LRRC4BQ9NT99 713 aa11.84□□□□□ -0.51
CSMD1-209ENST00000520630 KDM2AQ9Y2K7 1162 aa11.84□□□□□ -0.51
CSMD1-209ENST00000520630 NFAT5O94916 1531 aa11.84□□□□□ -0.51
CSMD1-209ENST00000520630 PCNTO95613 3336 aa11.84□□□□□ -0.51
CSMD1-209ENST00000520630 PPIP5K1Q6PFW1 1433 aa11.84□□□□□ -0.51
CSMD1-209ENST00000520630 YBX3P16989 372 aaKnown RBP eCLIP11.83□□□□□ -0.52
CSMD1-209ENST00000520630 GPR162Q16538 588 aa11.83□□□□□ -0.52
CSMD1-209ENST00000520630 TOM1L2Q6ZVM7 507 aa11.83□□□□□ -0.52
CSMD1-209ENST00000520630 MON2Q7Z3U7 1717 aa11.83□□□□□ -0.52
CSMD1-209ENST00000520630 USP6P35125 1406 aa11.82□□□□□ -0.52
CSMD1-209ENST00000520630 CPSF1Q10570 1443 aaKnown RBP11.82□□□□□ -0.52
CSMD1-209ENST00000520630 TNS2Q63HR2 1409 aa11.82□□□□□ -0.52
CSMD1-209ENST00000520630 ZBTB7CA1YPR0 619 aa11.81□□□□□ -0.52
CSMD1-209ENST00000520630 DCAF11Q8TEB1 546 aa11.81□□□□□ -0.52
CSMD1-209ENST00000520630 AKT1S1Q96B36 256 aa11.81□□□□□ -0.52
CSMD1-209ENST00000520630 ARHGEF25Q86VW2 580 aa11.8□□□□□ -0.52
CSMD1-209ENST00000520630 ACSBG1Q96GR2 724 aa11.8□□□□□ -0.52
CSMD1-209ENST00000520630 CARD10Q9BWT7 1032 aa11.8□□□□□ -0.52
CSMD1-209ENST00000520630 ATP10DQ9P241 1426 aa11.79□□□□□ -0.52
CSMD1-209ENST00000520630 C5P01031 1676 aa11.79□□□□□ -0.52
CSMD1-209ENST00000520630 NLRP6P59044 892 aa11.79□□□□□ -0.52
CSMD1-209ENST00000520630 PNPLA7Q6ZV29 1317 aa11.79□□□□□ -0.52
CSMD1-209ENST00000520630 ADCY9O60503 1353 aa11.79□□□□□ -0.52
CSMD1-209ENST00000520630 TOGARAM1Q9Y4F4 1720 aa11.78□□□□□ -0.52
CSMD1-209ENST00000520630 CDCA7Q9BWT1 371 aaPredicted RBP11.78□□□□□ -0.52
CSMD1-209ENST00000520630 ITGB4P16144 1822 aa11.78□□□□□ -0.52
CSMD1-209ENST00000520630 UBR3Q6ZT12 1888 aa11.78□□□□□ -0.52
CSMD1-209ENST00000520630 BRD4O60885 1362 aaPredicted RBP11.78□□□□□ -0.52
CSMD1-209ENST00000520630 WDR90Q96KV7 1748 aa11.77□□□□□ -0.52
CSMD1-209ENST00000520630 KIAA1551Q9HCM1 1747 aa11.77□□□□□ -0.52
CSMD1-209ENST00000520630 EXOC5O00471 708 aa11.77□□□□□ -0.53
CSMD1-209ENST00000520630 HSPA6P17066 643 aa11.77□□□□□ -0.53
CSMD1-209ENST00000520630 CABP2Q9NPB3 220 aa11.77□□□□□ -0.53
CSMD1-209ENST00000520630 PELP1Q8IZL8 1130 aaKnown RBP11.76□□□□□ -0.53
CSMD1-209ENST00000520630 BRCA1P38398 1863 aaKnown RBP11.76□□□□□ -0.53
CSMD1-209ENST00000520630 FAM208AQ9UK61 1670 aaKnown RBP11.75□□□□□ -0.53
CSMD1-209ENST00000520630 KIF13BQ9NQT8 1826 aa11.75□□□□□ -0.53
CSMD1-209ENST00000520630 KCNQ4P56696 695 aa11.75□□□□□ -0.53
CSMD1-209ENST00000520630 NBPF1Q3BBV0 1214 aa11.75□□□□□ -0.53
CSMD1-209ENST00000520630 KLHL34Q8N239 644 aa11.75□□□□□ -0.53
CSMD1-209ENST00000520630 SLC16A10Q8TF71 515 aa11.75□□□□□ -0.53
CSMD1-209ENST00000520630 N4BP2Q86UW6 1770 aaPredicted RBP11.74□□□□□ -0.53
CSMD1-209ENST00000520630 CABP1Q9NZU7 370 aa11.74□□□□□ -0.53
CSMD1-209ENST00000520630 CCDC7Q96M83 1385 aa11.74□□□□□ -0.53
CSMD1-209ENST00000520630 SBF1O95248 1867 aa11.72□□□□□ -0.53
CSMD1-209ENST00000520630 NSD2O96028 1365 aa11.72□□□□□ -0.53
CSMD1-209ENST00000520630 DNAJC5GQ8N7S2 189 aa11.72□□□□□ -0.53
CSMD1-209ENST00000520630 RAB3GAP2Q9H2M9 1393 aa11.71□□□□□ -0.53
CSMD1-209ENST00000520630 TTC21BQ7Z4L5 1316 aa11.71□□□□□ -0.53
CSMD1-209ENST00000520630 SRPK2P78362 688 aaKnown RBP11.71□□□□□ -0.53
CSMD1-209ENST00000520630 STAC3Q96MF2 364 aa11.71□□□□□ -0.53
CSMD1-209ENST00000520630 MAP2P11137 1827 aaKnown RBP11.71□□□□□ -0.54
CSMD1-209ENST00000520630 KIF3CO14782 793 aa11.7□□□□□ -0.54
CSMD1-209ENST00000520630 SOX12O15370 315 aa11.7□□□□□ -0.54
CSMD1-209ENST00000520630 GRIN3BO60391 1043 aa11.7□□□□□ -0.54
CSMD1-209ENST00000520630 CICQ96RK0 1608 aaPredicted RBP11.7□□□□□ -0.54
CSMD1-209ENST00000520630 ERBB3P21860 1342 aa11.69□□□□□ -0.54
CSMD1-209ENST00000520630 CSB-PGBD3P0DP91 1061 aa11.69□□□□□ -0.54
CSMD1-209ENST00000520630 POLD1P28340 1107 aa11.69□□□□□ -0.54
CSMD1-209ENST00000520630 TRIM26Q12899 539 aaPredicted RBP11.69□□□□□ -0.54
CSMD1-209ENST00000520630 GPBP1L1Q9HC44 474 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms