RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 WDR17Q8IZU2 1322 aa22.68■■□□□ 1.22
IGHV3-42-201ENST00000520410 EZH2Q15910 746 aaKnown RBP22.68■■□□□ 1.22
IGHV3-42-201ENST00000520410 AXIN2Q9Y2T1 843 aa22.68■■□□□ 1.22
IGHV3-42-201ENST00000520410 DDB1Q16531 1140 aa22.67■■□□□ 1.22
IGHV3-42-201ENST00000520410 A0A1W2PP64 1363 aa22.66■■□□□ 1.22
IGHV3-42-201ENST00000520410 CD163L1Q9NR16 1453 aa22.66■■□□□ 1.22
IGHV3-42-201ENST00000520410 EDC4Q6P2E9 1401 aaKnown RBP22.65■■□□□ 1.22
IGHV3-42-201ENST00000520410 PARP4Q9UKK3 1724 aaKnown RBP22.65■■□□□ 1.22
IGHV3-42-201ENST00000520410 NFAT5O94916 1531 aa22.65■■□□□ 1.22
IGHV3-42-201ENST00000520410 COL18A1P39060 1754 aa22.64■■□□□ 1.22
IGHV3-42-201ENST00000520410 USP47Q96K76 1375 aa22.63■■□□□ 1.21
IGHV3-42-201ENST00000520410 RGPD5Q99666 1765 aa22.63■■□□□ 1.21
IGHV3-42-201ENST00000520410 LRRC37A3O60309 1634 aa22.63■■□□□ 1.21
IGHV3-42-201ENST00000520410 OVOS2A0A0G2JMS6 1433 aa22.63■■□□□ 1.21
IGHV3-42-201ENST00000520410 OVOS2A0A0J9YW53 1432 aa22.63■■□□□ 1.21
IGHV3-42-201ENST00000520410 OVOS2Q6IE36 1432 aa22.63■■□□□ 1.21
IGHV3-42-201ENST00000520410 SLC24A1O60721 1099 aa22.62■■□□□ 1.21
IGHV3-42-201ENST00000520410 TMF1P82094 1093 aa22.62■■□□□ 1.21
IGHV3-42-201ENST00000520410 R3HDM1Q15032 1099 aaKnown RBP22.62■■□□□ 1.21
IGHV3-42-201ENST00000520410 USP31Q70CQ4 1352 aa22.62■■□□□ 1.21
IGHV3-42-201ENST00000520410 TESK2Q96S53 571 aa22.61■■□□□ 1.21
IGHV3-42-201ENST00000520410 NLRP2Q9NX02 1062 aa22.61■■□□□ 1.21
IGHV3-42-201ENST00000520410 DISP2A7MBM2 1401 aa22.6■■□□□ 1.21
IGHV3-42-201ENST00000520410 NINLQ9Y2I6 1382 aa22.6■■□□□ 1.21
IGHV3-42-201ENST00000520410 PUS7Q96PZ0 661 aaKnown RBP22.59■■□□□ 1.21
IGHV3-42-201ENST00000520410 CDCA7Q9BWT1 371 aaPredicted RBP22.59■■□□□ 1.21
IGHV3-42-201ENST00000520410 CARD10Q9BWT7 1032 aa22.59■■□□□ 1.21
IGHV3-42-201ENST00000520410 WNK3Q9BYP7 1800 aa22.59■■□□□ 1.21
IGHV3-42-201ENST00000520410 C11orf95C9JLR9 678 aaPredicted RBP22.58■■□□□ 1.21
IGHV3-42-201ENST00000520410 COG3Q96JB2 828 aa22.58■■□□□ 1.21
IGHV3-42-201ENST00000520410 LTN1O94822 1766 aa22.58■■□□□ 1.2
IGHV3-42-201ENST00000520410 CAMKK2Q96RR4 588 aa22.57■■□□□ 1.2
IGHV3-42-201ENST00000520410 CCDC7Q96M83 1385 aa22.57■■□□□ 1.2
IGHV3-42-201ENST00000520410 ANKRD24Q8TF21 1146 aa22.56■■□□□ 1.2
IGHV3-42-201ENST00000520410 LTV1Q96GA3 475 aaPredicted RBP22.56■■□□□ 1.2
IGHV3-42-201ENST00000520410 ABCC6O95255 1503 aa22.56■■□□□ 1.2
IGHV3-42-201ENST00000520410 USP54Q70EL1 1684 aa22.55■■□□□ 1.2
IGHV3-42-201ENST00000520410 PARD3Q8TEW0 1356 aa22.55■■□□□ 1.2
IGHV3-42-201ENST00000520410 EXOC5O00471 708 aa22.55■■□□□ 1.2
IGHV3-42-201ENST00000520410 NBPF14Q5TI25 921 aa22.54■■□□□ 1.2
IGHV3-42-201ENST00000520410 ERBB3P21860 1342 aa22.54■■□□□ 1.2
IGHV3-42-201ENST00000520410 POLR3GLQ9BT43 218 aa22.53■■□□□ 1.2
IGHV3-42-201ENST00000520410 ANKRD36BQ8N2N9 1353 aa22.52■■□□□ 1.2
IGHV3-42-201ENST00000520410 CDCA8Q53HL2 280 aa22.52■■□□□ 1.2
IGHV3-42-201ENST00000520410 MARCH10Q8NA82 808 aaPredicted RBP22.52■■□□□ 1.2
IGHV3-42-201ENST00000520410 AMPHP49418 695 aa22.51■■□□□ 1.19
IGHV3-42-201ENST00000520410 CCER1Q8TC90 406 aaPredicted RBP22.51■■□□□ 1.19
IGHV3-42-201ENST00000520410 RREB1Q92766 1687 aa22.49■■□□□ 1.19
IGHV3-42-201ENST00000520410 PEAK1Q9H792 1746 aa22.49■■□□□ 1.19
IGHV3-42-201ENST00000520410 IL2RBP14784 551 aa22.49■■□□□ 1.19
IGHV3-42-201ENST00000520410 LRP5O75197 1615 aa22.49■■□□□ 1.19
IGHV3-42-201ENST00000520410 TNS2Q63HR2 1409 aa22.48■■□□□ 1.19
IGHV3-42-201ENST00000520410 NUP188Q5SRE5 1749 aa22.48■■□□□ 1.19
IGHV3-42-201ENST00000520410 GGNBP2Q9H3C7 697 aa22.48■■□□□ 1.19
IGHV3-42-201ENST00000520410 BCL11BQ9C0K0 894 aaPredicted RBP22.47■■□□□ 1.19
IGHV3-42-201ENST00000520410 TIMELESSQ9UNS1 1208 aa22.47■■□□□ 1.19
IGHV3-42-201ENST00000520410 CLSPNQ9HAW4 1339 aa22.47■■□□□ 1.19
IGHV3-42-201ENST00000520410 FBLN1P23142 703 aa22.46■■□□□ 1.19
IGHV3-42-201ENST00000520410 IP6K1Q92551 441 aa22.46■■□□□ 1.19
IGHV3-42-201ENST00000520410 ACSBG1Q96GR2 724 aa22.46■■□□□ 1.19
IGHV3-42-201ENST00000520410 PTF1AQ7RTS3 328 aa22.45■■□□□ 1.18
IGHV3-42-201ENST00000520410 MAP3K19Q56UN5 1328 aa22.45■■□□□ 1.18
IGHV3-42-201ENST00000520410 SBF2Q86WG5 1849 aa22.43■■□□□ 1.18
IGHV3-42-201ENST00000520410 RRS1Q15050 365 aaKnown RBP22.43■■□□□ 1.18
IGHV3-42-201ENST00000520410 HOXC9P31274 260 aa22.42■■□□□ 1.18
IGHV3-42-201ENST00000520410 DDX54Q8TDD1 881 aaKnown RBP22.41■■□□□ 1.18
IGHV3-42-201ENST00000520410 FAM208AQ9UK61 1670 aaKnown RBP22.4■■□□□ 1.18
IGHV3-42-201ENST00000520410 PLSCR1O15162 318 aa22.4■■□□□ 1.18
IGHV3-42-201ENST00000520410 KIF20BQ96Q89 1820 aa22.4■■□□□ 1.18
IGHV3-42-201ENST00000520410 SMG6Q86US8 1419 aaKnown RBP22.4■■□□□ 1.18
IGHV3-42-201ENST00000520410 NSD3Q9BZ95 1437 aa22.4■■□□□ 1.18
IGHV3-42-201ENST00000520410 FYB1O15117 783 aa22.39■■□□□ 1.17
IGHV3-42-201ENST00000520410 KCNQ2O43526 872 aa22.39■■□□□ 1.17
IGHV3-42-201ENST00000520410 PPP1R1BQ9UD71 204 aaPredicted RBP22.38■■□□□ 1.17
IGHV3-42-201ENST00000520410 RGPD3A6NKT7 1758 aaPredicted RBP22.38■■□□□ 1.17
IGHV3-42-201ENST00000520410 RGPD4Q7Z3J3 1758 aa22.38■■□□□ 1.17
IGHV3-42-201ENST00000520410 BCL9O00512 1426 aa22.37■■□□□ 1.17
IGHV3-42-201ENST00000520410 RTL1A6NKG5 1358 aa22.37■■□□□ 1.17
IGHV3-42-201ENST00000520410 MYOM1P52179 1685 aa22.36■■□□□ 1.17
IGHV3-42-201ENST00000520410 TXNRD1Q16881 649 aa22.35■■□□□ 1.17
IGHV3-42-201ENST00000520410 USHBP1Q8N6Y0 703 aa22.35■■□□□ 1.17
IGHV3-42-201ENST00000520410 SYTL4Q96C24 671 aaPredicted RBP22.35■■□□□ 1.17
IGHV3-42-201ENST00000520410 STK32BQ9NY57 414 aa22.35■■□□□ 1.17
IGHV3-42-201ENST00000520410 NHSQ6T4R5 1651 aa22.35■■□□□ 1.17
IGHV3-42-201ENST00000520410 PPM1GO15355 546 aaPredicted RBP22.34■■□□□ 1.17
IGHV3-42-201ENST00000520410 ANO8Q9HCE9 1232 aaPredicted RBP22.34■■□□□ 1.17
IGHV3-42-201ENST00000520410 EIF4G2P78344 907 aaKnown RBP eCLIP22.33■■□□□ 1.17
IGHV3-42-201ENST00000520410 SPON1Q9HCB6 807 aa22.32■■□□□ 1.16
IGHV3-42-201ENST00000520410 RAPGEF4Q8WZA2 1011 aa22.31■■□□□ 1.16
IGHV3-42-201ENST00000520410 RGPD2P0DJD1 1756 aa22.3■■□□□ 1.16
IGHV3-42-201ENST00000520410 FLT4P35916 1363 aa22.3■■□□□ 1.16
IGHV3-42-201ENST00000520410 HSPA5P11021 654 aaKnown RBP22.3■■□□□ 1.16
IGHV3-42-201ENST00000520410 CARD14Q9BXL6 1004 aa22.3■■□□□ 1.16
IGHV3-42-201ENST00000520410 HSP90AB2PQ58FF8 381 aa22.29■■□□□ 1.16
IGHV3-42-201ENST00000520410 PROM2Q8N271 834 aa22.29■■□□□ 1.16
IGHV3-42-201ENST00000520410 ZCRB1Q8TBF4 217 aaKnown RBP22.29■■□□□ 1.16
IGHV3-42-201ENST00000520410 CGNL1Q0VF96 1302 aa22.29■■□□□ 1.16
IGHV3-42-201ENST00000520410 MEGF6O75095 1541 aa22.28■■□□□ 1.16
IGHV3-42-201ENST00000520410 TATP17735 454 aaPredicted RBP22.28■■□□□ 1.16
IGHV3-42-201ENST00000520410 NBPF6Q5VWK0 638 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms