RNA–Protein interactions for RNA: ENST00000520264.1

TRIM17-208, Transcript of tripartite motif containing 17, humanhuman

TSL 4

Gene TRIM17, Length 551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17-208ENST00000520264 CARD11Q9BXL7 1154 aa17.26■□□□□ 0.35
TRIM17-208ENST00000520264 EIF3AQ14152 1382 aaKnown RBP17.26■□□□□ 0.35
TRIM17-208ENST00000520264 ATP10DQ9P241 1426 aa17.25■□□□□ 0.35
TRIM17-208ENST00000520264 HIRIP3Q9BW71 556 aaPredicted RBP17.25■□□□□ 0.35
TRIM17-208ENST00000520264 NHSQ6T4R5 1651 aa17.25■□□□□ 0.35
TRIM17-208ENST00000520264 PTF1AQ7RTS3 328 aa17.24■□□□□ 0.35
TRIM17-208ENST00000520264 GPRASP1Q5JY77 1395 aa17.24■□□□□ 0.35
TRIM17-208ENST00000520264 CENPJQ9HC77 1338 aaPredicted RBP17.23■□□□□ 0.35
TRIM17-208ENST00000520264 ARXQ96QS3 562 aa17.23■□□□□ 0.35
TRIM17-208ENST00000520264 BCL11BQ9C0K0 894 aaPredicted RBP17.23■□□□□ 0.35
TRIM17-208ENST00000520264 AATKQ6ZMQ8 1374 aa17.23■□□□□ 0.35
TRIM17-208ENST00000520264 C11orf95C9JLR9 678 aaPredicted RBP17.22■□□□□ 0.35
TRIM17-208ENST00000520264 GPR162Q16538 588 aa17.22■□□□□ 0.35
TRIM17-208ENST00000520264 TCP11L2Q8N4U5 519 aa17.22■□□□□ 0.35
TRIM17-208ENST00000520264 COL5A2P05997 1499 aaPredicted RBP17.22■□□□□ 0.35
TRIM17-208ENST00000520264 WDR90Q96KV7 1748 aa17.21■□□□□ 0.35
TRIM17-208ENST00000520264 LARP1Q6PKG0 1096 aaKnown RBP17.21■□□□□ 0.35
TRIM17-208ENST00000520264 BCL9O00512 1426 aa17.21■□□□□ 0.34
TRIM17-208ENST00000520264 SLC15A2Q16348 729 aa17.2■□□□□ 0.34
TRIM17-208ENST00000520264 PRR36Q9H6K5 1346 aa17.2■□□□□ 0.34
TRIM17-208ENST00000520264 ADCY9O60503 1353 aa17.19■□□□□ 0.34
TRIM17-208ENST00000520264 BTAF1O14981 1849 aa17.19■□□□□ 0.34
TRIM17-208ENST00000520264 WASLO00401 505 aaPredicted RBP17.18■□□□□ 0.34
TRIM17-208ENST00000520264 STK32BQ9NY57 414 aa17.18■□□□□ 0.34
TRIM17-208ENST00000520264 THRAP3Q9Y2W1 955 aaKnown RBP17.17■□□□□ 0.34
TRIM17-208ENST00000520264 CPDO75976 1380 aa17.16■□□□□ 0.34
TRIM17-208ENST00000520264 SLC34A2O95436 690 aa17.16■□□□□ 0.34
TRIM17-208ENST00000520264 COL18A1P39060 1754 aa17.15■□□□□ 0.34
TRIM17-208ENST00000520264 CRB1P82279 1406 aa17.15■□□□□ 0.34
TRIM17-208ENST00000520264 TXNRD1Q16881 649 aa17.15■□□□□ 0.34
TRIM17-208ENST00000520264 CDK19Q9BWU1 502 aa17.15■□□□□ 0.34
TRIM17-208ENST00000520264 ZC3H6P61129 1189 aaKnown RBP17.14■□□□□ 0.33
TRIM17-208ENST00000520264 SRPK2P78362 688 aaKnown RBP17.14■□□□□ 0.33
TRIM17-208ENST00000520264 RGPD5Q99666 1765 aa17.14■□□□□ 0.33
TRIM17-208ENST00000520264 EVC2Q86UK5 1308 aa17.13■□□□□ 0.33
TRIM17-208ENST00000520264 USP47Q96K76 1375 aa17.12■□□□□ 0.33
TRIM17-208ENST00000520264 CAPN15O75808 1086 aa17.11■□□□□ 0.33
TRIM17-208ENST00000520264 YBX3P16989 372 aaKnown RBP eCLIP17.11■□□□□ 0.33
TRIM17-208ENST00000520264 EVA1CP58658 441 aa17.11■□□□□ 0.33
TRIM17-208ENST00000520264 NUDT16Q96DE0 195 aaKnown RBP17.11■□□□□ 0.33
TRIM17-208ENST00000520264 PAK3O75914 559 aaPredicted RBP17.1■□□□□ 0.33
TRIM17-208ENST00000520264 COL13A1Q5TAT6 717 aaPredicted RBP17.1■□□□□ 0.33
TRIM17-208ENST00000520264 PELP1Q8IZL8 1130 aaKnown RBP17.1■□□□□ 0.33
TRIM17-208ENST00000520264 NLGN2Q8NFZ4 835 aa17.1■□□□□ 0.33
TRIM17-208ENST00000520264 GPBP1L1Q9HC44 474 aaPredicted RBP17.1■□□□□ 0.33
TRIM17-208ENST00000520264 CABP2Q9NPB3 220 aa17.1■□□□□ 0.33
TRIM17-208ENST00000520264 ST20-MTHFSA0A0A6YYL1 179 aa17.09■□□□□ 0.33
TRIM17-208ENST00000520264 SBNO2Q9Y2G9 1366 aa17.08■□□□□ 0.32
TRIM17-208ENST00000520264 USP19O94966 1318 aa17.08■□□□□ 0.32
TRIM17-208ENST00000520264 PRELPP51888 382 aa17.08■□□□□ 0.32
TRIM17-208ENST00000520264 DNAJC5GQ8N7S2 189 aa17.08■□□□□ 0.32
TRIM17-208ENST00000520264 NGDNQ8NEJ9 315 aaKnown RBP17.08■□□□□ 0.32
TRIM17-208ENST00000520264 PIK3C2AO00443 1686 aa17.07■□□□□ 0.32
TRIM17-208ENST00000520264 DDB1Q16531 1140 aa17.06■□□□□ 0.32
TRIM17-208ENST00000520264 MARCH10Q8NA82 808 aaPredicted RBP17.06■□□□□ 0.32
TRIM17-208ENST00000520264 CCDC61Q9Y6R9 512 aa17.06■□□□□ 0.32
TRIM17-208ENST00000520264 KAT6BQ8WYB5 2073 aa17.05■□□□□ 0.32
TRIM17-208ENST00000520264 SLC24A1O60721 1099 aa17.05■□□□□ 0.32
TRIM17-208ENST00000520264 ZNF827Q17R98 1081 aa17.05■□□□□ 0.32
TRIM17-208ENST00000520264 KLHL34Q8N239 644 aa17.05■□□□□ 0.32
TRIM17-208ENST00000520264 PPIP5K1Q6PFW1 1433 aa17.04■□□□□ 0.32
TRIM17-208ENST00000520264 NUTM2GQ5VZR2 741 aa17.04■□□□□ 0.32
TRIM17-208ENST00000520264 ABCC6O95255 1503 aa17.04■□□□□ 0.32
TRIM17-208ENST00000520264 GRIN3BO60391 1043 aa17.03■□□□□ 0.32
TRIM17-208ENST00000520264 APLP1P51693 650 aa17.03■□□□□ 0.32
TRIM17-208ENST00000520264 EIF4G2P78344 907 aaKnown RBP eCLIP17.03■□□□□ 0.32
TRIM17-208ENST00000520264 SLIT3O75094 1523 aa17.02■□□□□ 0.32
TRIM17-208ENST00000520264 LY75O60449 1722 aa17.02■□□□□ 0.32
TRIM17-208ENST00000520264 POLR3AO14802 1390 aaPredicted RBP17.02■□□□□ 0.31
TRIM17-208ENST00000520264 CICQ96RK0 1608 aaPredicted RBP17.01■□□□□ 0.31
TRIM17-208ENST00000520264 TMF1P82094 1093 aa17.01■□□□□ 0.31
TRIM17-208ENST00000520264 ZNF526Q8TF50 670 aaPredicted RBP17.01■□□□□ 0.31
TRIM17-208ENST00000520264 TESK2Q96S53 571 aa17.01■□□□□ 0.31
TRIM17-208ENST00000520264 TNS2Q63HR2 1409 aa17.01■□□□□ 0.31
TRIM17-208ENST00000520264 ACEP12821 1306 aa17■□□□□ 0.31
TRIM17-208ENST00000520264 KIF3CO14782 793 aa17■□□□□ 0.31
TRIM17-208ENST00000520264 CABP1Q9NZU7 370 aa17■□□□□ 0.31
TRIM17-208ENST00000520264 PLEKHG3A1L390 1219 aa16.99■□□□□ 0.31
TRIM17-208ENST00000520264 TNS4Q8IZW8 715 aa16.99■□□□□ 0.31
TRIM17-208ENST00000520264 TMC1Q8TDI8 760 aa16.99■□□□□ 0.31
TRIM17-208ENST00000520264 HSPA5P11021 654 aaKnown RBP16.98■□□□□ 0.31
TRIM17-208ENST00000520264 POLD1P28340 1107 aa16.97■□□□□ 0.31
TRIM17-208ENST00000520264 SLC16A10Q8TF71 515 aa16.97■□□□□ 0.31
TRIM17-208ENST00000520264 CDCA8Q53HL2 280 aa16.96■□□□□ 0.31
TRIM17-208ENST00000520264 PNPLA7Q6ZV29 1317 aa16.96■□□□□ 0.3
TRIM17-208ENST00000520264 BRD4O60885 1362 aaPredicted RBP16.95■□□□□ 0.3
TRIM17-208ENST00000520264 JMYQ8N9B5 988 aa16.95■□□□□ 0.3
TRIM17-208ENST00000520264 PUS7Q96PZ0 661 aaKnown RBP16.95■□□□□ 0.3
TRIM17-208ENST00000520264 POLR3GLQ9BT43 218 aa16.95■□□□□ 0.3
TRIM17-208ENST00000520264 AKT1S1Q96B36 256 aa16.94■□□□□ 0.3
TRIM17-208ENST00000520264 LRRC4BQ9NT99 713 aa16.94■□□□□ 0.3
TRIM17-208ENST00000520264 MON2Q7Z3U7 1717 aa16.93■□□□□ 0.3
TRIM17-208ENST00000520264 HDGFL2Q7Z4V5 671 aaPredicted RBP16.93■□□□□ 0.3
TRIM17-208ENST00000520264 WDR17Q8IZU2 1322 aa16.93■□□□□ 0.3
TRIM17-208ENST00000520264 ZNF692Q9BU19 519 aaPredicted RBP16.92■□□□□ 0.3
TRIM17-208ENST00000520264 CDCA7Q9BWT1 371 aaPredicted RBP16.92■□□□□ 0.3
TRIM17-208ENST00000520264 USP6P35125 1406 aa16.92■□□□□ 0.3
TRIM17-208ENST00000520264 USP54Q70EL1 1684 aa16.91■□□□□ 0.3
TRIM17-208ENST00000520264 KTN1Q86UP2 1357 aaKnown RBP16.91■□□□□ 0.3
TRIM17-208ENST00000520264 DOT1LQ8TEK3 1739 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms