RNA–Protein interactions for RNA: ENST00000520229.1

PDGFRB-206, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 738 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-206ENST00000520229 DISP2A7MBM2 1401 aa21.53■■□□□ 1.04
PDGFRB-206ENST00000520229 USP54Q70EL1 1684 aa21.53■■□□□ 1.04
PDGFRB-206ENST00000520229 COL5A2P05997 1499 aaPredicted RBP21.52■■□□□ 1.03
PDGFRB-206ENST00000520229 NFAT5O94916 1531 aa21.51■■□□□ 1.03
PDGFRB-206ENST00000520229 PARP4Q9UKK3 1724 aaKnown RBP21.5■■□□□ 1.03
PDGFRB-206ENST00000520229 ARHGEF25Q86VW2 580 aa21.5■■□□□ 1.03
PDGFRB-206ENST00000520229 WNK3Q9BYP7 1800 aa21.5■■□□□ 1.03
PDGFRB-206ENST00000520229 LARP1Q6PKG0 1096 aaKnown RBP21.49■■□□□ 1.03
PDGFRB-206ENST00000520229 OVOS2A0A0J9YW53 1432 aa21.48■■□□□ 1.03
PDGFRB-206ENST00000520229 OVOS2Q6IE36 1432 aa21.48■■□□□ 1.03
PDGFRB-206ENST00000520229 POLR3GLQ9BT43 218 aa21.48■■□□□ 1.03
PDGFRB-206ENST00000520229 USP35Q9P2H5 1018 aa21.48■■□□□ 1.03
PDGFRB-206ENST00000520229 PEAK1Q9H792 1746 aa21.48■■□□□ 1.03
PDGFRB-206ENST00000520229 MYOM1P52179 1685 aa21.47■■□□□ 1.03
PDGFRB-206ENST00000520229 COG3Q96JB2 828 aa21.46■■□□□ 1.03
PDGFRB-206ENST00000520229 LRP5O75197 1615 aa21.46■■□□□ 1.03
PDGFRB-206ENST00000520229 FAM182BQ5T319 152 aa21.45■■□□□ 1.02
PDGFRB-206ENST00000520229 CRB1P82279 1406 aa21.45■■□□□ 1.02
PDGFRB-206ENST00000520229 ABCC6O95255 1503 aa21.45■■□□□ 1.02
PDGFRB-206ENST00000520229 LRRC37A3O60309 1634 aa21.44■■□□□ 1.02
PDGFRB-206ENST00000520229 RREB1Q92766 1687 aa21.44■■□□□ 1.02
PDGFRB-206ENST00000520229 BARGINQ6ZT62 677 aa21.44■■□□□ 1.02
PDGFRB-206ENST00000520229 TCP11L2Q8N4U5 519 aa21.44■■□□□ 1.02
PDGFRB-206ENST00000520229 AXIN2Q9Y2T1 843 aa21.44■■□□□ 1.02
PDGFRB-206ENST00000520229 RGPD5Q99666 1765 aa21.43■■□□□ 1.02
PDGFRB-206ENST00000520229 TOM1L2Q6ZVM7 507 aa21.42■■□□□ 1.02
PDGFRB-206ENST00000520229 THRAP3Q9Y2W1 955 aaKnown RBP21.42■■□□□ 1.02
PDGFRB-206ENST00000520229 NSD3Q9BZ95 1437 aa21.41■■□□□ 1.02
PDGFRB-206ENST00000520229 WDR17Q8IZU2 1322 aa21.41■■□□□ 1.02
PDGFRB-206ENST00000520229 CSB-PGBD3P0DP91 1061 aa21.41■■□□□ 1.02
PDGFRB-206ENST00000520229 GGNBP2Q9H3C7 697 aa21.4■■□□□ 1.02
PDGFRB-206ENST00000520229 LTN1O94822 1766 aa21.39■■□□□ 1.01
PDGFRB-206ENST00000520229 FYB1O15117 783 aa21.39■■□□□ 1.01
PDGFRB-206ENST00000520229 SBF2Q86WG5 1849 aa21.39■■□□□ 1.01
PDGFRB-206ENST00000520229 NUP188Q5SRE5 1749 aa21.38■■□□□ 1.01
PDGFRB-206ENST00000520229 CARD14Q9BXL6 1004 aa21.38■■□□□ 1.01
PDGFRB-206ENST00000520229 KIF20BQ96Q89 1820 aa21.38■■□□□ 1.01
PDGFRB-206ENST00000520229 EN1Q05925 392 aaPredicted RBP21.35■■□□□ 1.01
PDGFRB-206ENST00000520229 ERBB3P21860 1342 aa21.34■■□□□ 1.01
PDGFRB-206ENST00000520229 MAP3K19Q56UN5 1328 aa21.34■■□□□ 1.01
PDGFRB-206ENST00000520229 BAG6P46379 1132 aa21.34■■□□□ 1.01
PDGFRB-206ENST00000520229 PDE3BQ13370 1112 aa21.34■■□□□ 1.01
PDGFRB-206ENST00000520229 SF3B2Q13435 895 aaKnown RBP21.34■■□□□ 1.01
PDGFRB-206ENST00000520229 CARD10Q9BWT7 1032 aa21.34■■□□□ 1.01
PDGFRB-206ENST00000520229 RGPD3A6NKT7 1758 aaPredicted RBP21.33■■□□□ 1.01
PDGFRB-206ENST00000520229 RGPD4Q7Z3J3 1758 aa21.33■■□□□ 1.01
PDGFRB-206ENST00000520229 C11orf95C9JLR9 678 aaPredicted RBP21.33■■□□□ 1.01
PDGFRB-206ENST00000520229 AMPHP49418 695 aa21.33■■□□□ 1.01
PDGFRB-206ENST00000520229 ANKRD24Q8TF21 1146 aa21.33■■□□□ 1.01
PDGFRB-206ENST00000520229 IP6K1Q92551 441 aa21.33■■□□□ 1.01
PDGFRB-206ENST00000520229 CAMKK2Q96RR4 588 aa21.33■■□□□ 1.01
PDGFRB-206ENST00000520229 CGNL1Q0VF96 1302 aa21.32■■□□□ 1
PDGFRB-206ENST00000520229 FBLN1P23142 703 aa21.32■■□□□ 1
PDGFRB-206ENST00000520229 CCDC7Q96M83 1385 aa21.32■■□□□ 1
PDGFRB-206ENST00000520229 FAM196AQ6ZSG2 479 aa21.31■■□□□ 1
PDGFRB-206ENST00000520229 NLRP2Q9NX02 1062 aa21.31■■□□□ 1
PDGFRB-206ENST00000520229 CDCA7Q9BWT1 371 aaPredicted RBP21.3■■□□□ 1
PDGFRB-206ENST00000520229 RTL1A6NKG5 1358 aa21.3■■□□□ 1
PDGFRB-206ENST00000520229 TRIM37O94972 964 aa21.29■■□□□ 1
PDGFRB-206ENST00000520229 HOXC9P31274 260 aa21.29■■□□□ 1
PDGFRB-206ENST00000520229 RRS1Q15050 365 aaKnown RBP21.29■■□□□ 1
PDGFRB-206ENST00000520229 EZH2Q15910 746 aaKnown RBP21.29■■□□□ 1
PDGFRB-206ENST00000520229 PANK3Q9H999 370 aa21.29■■□□□ 1
PDGFRB-206ENST00000520229 KIF7Q2M1P5 1343 aa21.29■■□□□ 1
PDGFRB-206ENST00000520229 PARD3Q8TEW0 1356 aa21.28■■□□□ 1
PDGFRB-206ENST00000520229 LTV1Q96GA3 475 aaPredicted RBP21.28■■□□□ 1
PDGFRB-206ENST00000520229 BCL9O00512 1426 aa21.28■■□□□ 1
PDGFRB-206ENST00000520229 DDB1Q16531 1140 aa21.27■■□□□ 1
PDGFRB-206ENST00000520229 PSDA5PKW4 1024 aaPredicted RBP21.26■□□□□ 0.99
PDGFRB-206ENST00000520229 OVOS2A0A0G2JMS6 1433 aa21.26■□□□□ 0.99
PDGFRB-206ENST00000520229 FAM208AQ9UK61 1670 aaKnown RBP21.24■□□□□ 0.99
PDGFRB-206ENST00000520229 FLT4P35916 1363 aa21.23■□□□□ 0.99
PDGFRB-206ENST00000520229 KIF24Q5T7B8 1368 aa21.23■□□□□ 0.99
PDGFRB-206ENST00000520229 SMG6Q86US8 1419 aaKnown RBP21.22■□□□□ 0.99
PDGFRB-206ENST00000520229 ANKRD26Q9UPS8 1709 aa21.21■□□□□ 0.99
PDGFRB-206ENST00000520229 EXOC5O00471 708 aa21.21■□□□□ 0.99
PDGFRB-206ENST00000520229 IL2RBP14784 551 aa21.21■□□□□ 0.99
PDGFRB-206ENST00000520229 PTF1AQ7RTS3 328 aa21.21■□□□□ 0.99
PDGFRB-206ENST00000520229 NSD2O96028 1365 aa21.21■□□□□ 0.99
PDGFRB-206ENST00000520229 TNS2Q63HR2 1409 aa21.21■□□□□ 0.99
PDGFRB-206ENST00000520229 MARCH10Q8NA82 808 aaPredicted RBP21.2■□□□□ 0.98
PDGFRB-206ENST00000520229 KNSTRNQ9Y448 316 aa21.2■□□□□ 0.98
PDGFRB-206ENST00000520229 EMILIN1Q9Y6C2 1016 aa21.2■□□□□ 0.98
PDGFRB-206ENST00000520229 INSRP06213 1382 aa21.2■□□□□ 0.98
PDGFRB-206ENST00000520229 PPM1GO15355 546 aaPredicted RBP21.19■□□□□ 0.98
PDGFRB-206ENST00000520229 APBA3O96018 575 aa21.19■□□□□ 0.98
PDGFRB-206ENST00000520229 R3HDM1Q15032 1099 aaKnown RBP21.19■□□□□ 0.98
PDGFRB-206ENST00000520229 TNNT2P45379 298 aaPredicted RBP21.18■□□□□ 0.98
PDGFRB-206ENST00000520229 HSP90AB2PQ58FF8 381 aa21.18■□□□□ 0.98
PDGFRB-206ENST00000520229 NHSQ6T4R5 1651 aa21.18■□□□□ 0.98
PDGFRB-206ENST00000520229 CASZ1Q86V15 1759 aa21.18■□□□□ 0.98
PDGFRB-206ENST00000520229 WASHC2AQ641Q2 1341 aa21.15■□□□□ 0.98
PDGFRB-206ENST00000520229 MORC1Q86VD1 984 aa21.15■□□□□ 0.98
PDGFRB-206ENST00000520229 NBPF6Q5VWK0 638 aa21.14■□□□□ 0.97
PDGFRB-206ENST00000520229 NBPF4Q96M43 638 aa21.14■□□□□ 0.97
PDGFRB-206ENST00000520229 POLKQ9UBT6 870 aa21.14■□□□□ 0.97
PDGFRB-206ENST00000520229 SHANK3Q9BYB0 1731 aa21.14■□□□□ 0.97
PDGFRB-206ENST00000520229 RGPD2P0DJD1 1756 aa21.13■□□□□ 0.97
PDGFRB-206ENST00000520229 USHBP1Q8N6Y0 703 aa21.13■□□□□ 0.97
PDGFRB-206ENST00000520229 PAPPAQ13219 1627 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms