RNA–Protein interactions for RNA: ENST00000519946.1

NIPAL4-204, Transcript of NIPA like domain containing 4, humanhuman

TSL 5

Gene NIPAL4, Length 567 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL4-204ENST00000519946 GJD4Q96KN9 370 aaPredicted RBP24.59■■□□□ 1.53
NIPAL4-204ENST00000519946 CCDC9Q9Y3X0 531 aaKnown RBP24.59■■□□□ 1.53
NIPAL4-204ENST00000519946 RGPD5Q99666 1765 aa24.59■■□□□ 1.53
NIPAL4-204ENST00000519946 CDK12Q9NYV4 1490 aaPredicted RBP24.58■■□□□ 1.53
NIPAL4-204ENST00000519946 FBLN1P23142 703 aa24.58■■□□□ 1.53
NIPAL4-204ENST00000519946 AXIN2Q9Y2T1 843 aa24.57■■□□□ 1.52
NIPAL4-204ENST00000519946 KNSTRNQ9Y448 316 aa24.55■■□□□ 1.52
NIPAL4-204ENST00000519946 MAP3K19Q56UN5 1328 aa24.55■■□□□ 1.52
NIPAL4-204ENST00000519946 NSD2O96028 1365 aa24.54■■□□□ 1.52
NIPAL4-204ENST00000519946 EVA1CP58658 441 aa24.54■■□□□ 1.52
NIPAL4-204ENST00000519946 RRS1Q15050 365 aaKnown RBP24.54■■□□□ 1.52
NIPAL4-204ENST00000519946 LARP1Q6PKG0 1096 aaKnown RBP24.53■■□□□ 1.52
NIPAL4-204ENST00000519946 SPATA31A5Q5VU36 1347 aa24.53■■□□□ 1.52
NIPAL4-204ENST00000519946 SPATA31A7Q8IWB4 1347 aa24.53■■□□□ 1.52
NIPAL4-204ENST00000519946 PEAK1Q9H792 1746 aa24.51■■□□□ 1.51
NIPAL4-204ENST00000519946 AMER1Q5JTC6 1135 aaPredicted RBP24.5■■□□□ 1.51
NIPAL4-204ENST00000519946 SPATA31A1Q5TZJ5 1347 aa24.5■■□□□ 1.51
NIPAL4-204ENST00000519946 PER1O15534 1290 aaPredicted RBP24.49■■□□□ 1.51
NIPAL4-204ENST00000519946 USP35Q9P2H5 1018 aa24.49■■□□□ 1.51
NIPAL4-204ENST00000519946 RTL1A6NKG5 1358 aa24.49■■□□□ 1.51
NIPAL4-204ENST00000519946 BLMP54132 1417 aaPredicted RBP24.49■■□□□ 1.51
NIPAL4-204ENST00000519946 CRB1P82279 1406 aa24.49■■□□□ 1.51
NIPAL4-204ENST00000519946 AMPHP49418 695 aa24.48■■□□□ 1.51
NIPAL4-204ENST00000519946 WDR17Q8IZU2 1322 aa24.48■■□□□ 1.51
NIPAL4-204ENST00000519946 ERBB3P21860 1342 aa24.47■■□□□ 1.51
NIPAL4-204ENST00000519946 CSB-PGBD3P0DP91 1061 aa24.47■■□□□ 1.51
NIPAL4-204ENST00000519946 HOXC9P31274 260 aa24.47■■□□□ 1.51
NIPAL4-204ENST00000519946 TNNT2P45379 298 aaPredicted RBP24.47■■□□□ 1.51
NIPAL4-204ENST00000519946 FAM98CQ17RN3 349 aaKnown RBP24.47■■□□□ 1.51
NIPAL4-204ENST00000519946 IP6K1Q92551 441 aa24.47■■□□□ 1.51
NIPAL4-204ENST00000519946 THSD7AQ9UPZ6 1657 aa24.46■■□□□ 1.51
NIPAL4-204ENST00000519946 EMILIN1Q9Y6C2 1016 aa24.46■■□□□ 1.51
NIPAL4-204ENST00000519946 TOM1L2Q6ZVM7 507 aa24.45■■□□□ 1.5
NIPAL4-204ENST00000519946 ANKRD24Q8TF21 1146 aa24.45■■□□□ 1.5
NIPAL4-204ENST00000519946 A0A0G2JS52 829 aa24.44■■□□□ 1.5
NIPAL4-204ENST00000519946 MYT1Q01538 1121 aa24.44■■□□□ 1.5
NIPAL4-204ENST00000519946 CC2D1BQ5T0F9 858 aaKnown RBP24.44■■□□□ 1.5
NIPAL4-204ENST00000519946 MORC1Q86VD1 984 aa24.44■■□□□ 1.5
NIPAL4-204ENST00000519946 WNK3Q9BYP7 1800 aa24.44■■□□□ 1.5
NIPAL4-204ENST00000519946 FLT4P35916 1363 aa24.43■■□□□ 1.5
NIPAL4-204ENST00000519946 MAP2P11137 1827 aaKnown RBP24.43■■□□□ 1.5
NIPAL4-204ENST00000519946 SEPT12Q8IYM1 358 aa24.43■■□□□ 1.5
NIPAL4-204ENST00000519946 BRWD3Q6RI45 1802 aa24.42■■□□□ 1.5
NIPAL4-204ENST00000519946 TCP11L2Q8N4U5 519 aa24.42■■□□□ 1.5
NIPAL4-204ENST00000519946 LTV1Q96GA3 475 aaPredicted RBP24.42■■□□□ 1.5
NIPAL4-204ENST00000519946 FAM208AQ9UK61 1670 aaKnown RBP24.42■■□□□ 1.5
NIPAL4-204ENST00000519946 CNGB1Q14028 1251 aaPredicted RBP24.41■■□□□ 1.5
NIPAL4-204ENST00000519946 KIF24Q5T7B8 1368 aa24.41■■□□□ 1.5
NIPAL4-204ENST00000519946 NPC1L1Q9UHC9 1359 aa24.41■■□□□ 1.5
NIPAL4-204ENST00000519946 ONECUT3O60422 494 aaPredicted RBP24.4■■□□□ 1.5
NIPAL4-204ENST00000519946 POLKQ9UBT6 870 aa24.4■■□□□ 1.5
NIPAL4-204ENST00000519946 SMG6Q86US8 1419 aaKnown RBP24.39■■□□□ 1.5
NIPAL4-204ENST00000519946 PPM1GO15355 546 aaPredicted RBP24.39■■□□□ 1.49
NIPAL4-204ENST00000519946 BARGINQ6ZT62 677 aa24.39■■□□□ 1.49
NIPAL4-204ENST00000519946 INSRP06213 1382 aa24.39■■□□□ 1.49
NIPAL4-204ENST00000519946 HSP90AB2PQ58FF8 381 aa24.38■■□□□ 1.49
NIPAL4-204ENST00000519946 CARD10Q9BWT7 1032 aa24.38■■□□□ 1.49
NIPAL4-204ENST00000519946 NLRP2Q9NX02 1062 aa24.38■■□□□ 1.49
NIPAL4-204ENST00000519946 THRAP3Q9Y2W1 955 aaKnown RBP24.38■■□□□ 1.49
NIPAL4-204ENST00000519946 RGPD2P0DJD1 1756 aa24.38■■□□□ 1.49
NIPAL4-204ENST00000519946 LRRC37A3O60309 1634 aa24.36■■□□□ 1.49
NIPAL4-204ENST00000519946 PARP4Q9UKK3 1724 aaKnown RBP24.36■■□□□ 1.49
NIPAL4-204ENST00000519946 SOCS7O14512 581 aa24.35■■□□□ 1.49
NIPAL4-204ENST00000519946 DISP2A7MBM2 1401 aa24.35■■□□□ 1.49
NIPAL4-204ENST00000519946 DDX10Q13206 875 aaKnown RBP24.33■■□□□ 1.49
NIPAL4-204ENST00000519946 KRT27Q7Z3Y8 459 aa24.31■■□□□ 1.48
NIPAL4-204ENST00000519946 NBPF6Q5VWK0 638 aa24.28■■□□□ 1.48
NIPAL4-204ENST00000519946 USHBP1Q8N6Y0 703 aa24.28■■□□□ 1.48
NIPAL4-204ENST00000519946 NBPF4Q96M43 638 aa24.28■■□□□ 1.48
NIPAL4-204ENST00000519946 ZNF316A6NFI3 1004 aaPredicted RBP24.26■■□□□ 1.47
NIPAL4-204ENST00000519946 EIF4A2Q14240 407 aaKnown RBP24.26■■□□□ 1.47
NIPAL4-204ENST00000519946 CDCA7Q9BWT1 371 aaPredicted RBP24.26■■□□□ 1.47
NIPAL4-204ENST00000519946 TNS2Q63HR2 1409 aa24.26■■□□□ 1.47
NIPAL4-204ENST00000519946 MEGF6O75095 1541 aa24.25■■□□□ 1.47
NIPAL4-204ENST00000519946 IL2RBP14784 551 aa24.25■■□□□ 1.47
NIPAL4-204ENST00000519946 FAM182BQ5T319 152 aa24.25■■□□□ 1.47
NIPAL4-204ENST00000519946 MTHFSP49914 203 aa24.24■■□□□ 1.47
NIPAL4-204ENST00000519946 DDB1Q16531 1140 aa24.24■■□□□ 1.47
NIPAL4-204ENST00000519946 PDE3BQ13370 1112 aa24.23■■□□□ 1.47
NIPAL4-204ENST00000519946 NCAPD2Q15021 1401 aa24.23■■□□□ 1.47
NIPAL4-204ENST00000519946 PARD3Q8TEW0 1356 aa24.21■■□□□ 1.47
NIPAL4-204ENST00000519946 UPF1Q92900 1129 aaKnown RBP eCLIP24.21■■□□□ 1.47
NIPAL4-204ENST00000519946 EYA1Q99502 592 aa24.21■■□□□ 1.47
NIPAL4-204ENST00000519946 COL3A1P02461 1466 aaPredicted RBP24.19■■□□□ 1.46
NIPAL4-204ENST00000519946 OVOS2A0A0G2JMS6 1433 aa24.18■■□□□ 1.46
NIPAL4-204ENST00000519946 RGPD1P0DJD0 1748 aa24.18■■□□□ 1.46
NIPAL4-204ENST00000519946 PPP2R1AP30153 589 aa24.18■■□□□ 1.46
NIPAL4-204ENST00000519946 SHANK3Q9BYB0 1731 aa24.18■■□□□ 1.46
NIPAL4-204ENST00000519946 IGSF1Q8N6C5 1336 aa24.17■■□□□ 1.46
NIPAL4-204ENST00000519946 EXOC5O00471 708 aa24.17■■□□□ 1.46
NIPAL4-204ENST00000519946 EP400Q96L91 3159 aa24.17■■□□□ 1.46
NIPAL4-204ENST00000519946 MARCH10Q8NA82 808 aaPredicted RBP24.16■■□□□ 1.46
NIPAL4-204ENST00000519946 RAPGEF4Q8WZA2 1011 aa24.16■■□□□ 1.46
NIPAL4-204ENST00000519946 IL13P35225 146 aa24.15■■□□□ 1.46
NIPAL4-204ENST00000519946 TATP17735 454 aaPredicted RBP24.13■■□□□ 1.45
NIPAL4-204ENST00000519946 FAM196AQ6ZSG2 479 aa24.13■■□□□ 1.45
NIPAL4-204ENST00000519946 PKD1L3Q7Z443 1732 aa24.13■■□□□ 1.45
NIPAL4-204ENST00000519946 TNS1Q9HBL0 1735 aaKnown RBP24.12■■□□□ 1.45
NIPAL4-204ENST00000519946 DIAPH1O60610 1272 aaKnown RBP24.11■■□□□ 1.45
NIPAL4-204ENST00000519946 AEBP1Q8IUX7 1158 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms