RNA–Protein interactions for RNA: ENST00000519589.1

KCNQ3-203, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 2

Gene KCNQ3, Length 3,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-203ENST00000519589 IRX5P78411 483 aaPredicted RBP10.57□□□□□ -0.72
KCNQ3-203ENST00000519589 SCAF11Q99590 1463 aaKnown RBP10.57□□□□□ -0.72
KCNQ3-203ENST00000519589 AK9Q5TCS8 1911 aa10.57□□□□□ -0.72
KCNQ3-203ENST00000519589 ZFP91Q96JP5 570 aaPredicted RBP10.57□□□□□ -0.72
KCNQ3-203ENST00000519589 C19orf44Q9H6X5 657 aa10.57□□□□□ -0.72
KCNQ3-203ENST00000519589 TBX22Q9Y458 520 aa10.57□□□□□ -0.72
KCNQ3-203ENST00000519589 ADAMTSL3P82987 1691 aa10.57□□□□□ -0.72
KCNQ3-203ENST00000519589 CBX1P83916 185 aa10.57□□□□□ -0.72
KCNQ3-203ENST00000519589 CSPP1Q1MSJ5 1256 aa10.57□□□□□ -0.72
KCNQ3-203ENST00000519589 CABP2Q9NPB3 220 aa10.57□□□□□ -0.72
KCNQ3-203ENST00000519589 CEP152O94986 1710 aa10.57□□□□□ -0.72
KCNQ3-203ENST00000519589 NKTRP30414 1462 aaKnown RBP10.56□□□□□ -0.72
KCNQ3-203ENST00000519589 SLFN5Q08AF3 891 aa10.56□□□□□ -0.72
KCNQ3-203ENST00000519589 C8orf37Q96NL8 207 aa10.56□□□□□ -0.72
KCNQ3-203ENST00000519589 LAMC1P11047 1609 aa10.55□□□□□ -0.72
KCNQ3-203ENST00000519589 CIZ1Q9ULV3 898 aaPredicted RBP10.55□□□□□ -0.72
KCNQ3-203ENST00000519589 CABLES1Q8TDN4 633 aa10.55□□□□□ -0.72
KCNQ3-203ENST00000519589 SNX21Q969T3 373 aa10.55□□□□□ -0.72
KCNQ3-203ENST00000519589 NGLY1Q96IV0 654 aa10.55□□□□□ -0.72
KCNQ3-203ENST00000519589 SPINK5Q9NQ38 1064 aaPredicted RBP10.54□□□□□ -0.72
KCNQ3-203ENST00000519589 PRAG1Q86YV5 1406 aa10.54□□□□□ -0.72
KCNQ3-203ENST00000519589 CEP170BQ9Y4F5 1589 aaPredicted RBP10.54□□□□□ -0.72
KCNQ3-203ENST00000519589 RBM25P49756 843 aaKnown RBP10.54□□□□□ -0.72
KCNQ3-203ENST00000519589 KLHL40Q2TBA0 621 aa10.54□□□□□ -0.72
KCNQ3-203ENST00000519589 TSC1Q92574 1164 aa10.54□□□□□ -0.72
KCNQ3-203ENST00000519589 RBSNQ9H1K0 784 aa10.54□□□□□ -0.72
KCNQ3-203ENST00000519589 UPF2Q9HAU5 1272 aaKnown RBP10.54□□□□□ -0.72
KCNQ3-203ENST00000519589 APAF1O14727 1248 aa10.54□□□□□ -0.72
KCNQ3-203ENST00000519589 RGS22Q8NE09 1264 aa10.54□□□□□ -0.72
KCNQ3-203ENST00000519589 METP08581 1390 aa10.54□□□□□ -0.72
KCNQ3-203ENST00000519589 EFCAB6Q5THR3 1501 aa10.53□□□□□ -0.72
KCNQ3-203ENST00000519589 UNC13BO14795 1591 aa10.53□□□□□ -0.72
KCNQ3-203ENST00000519589 IQGAP3Q86VI3 1631 aa10.53□□□□□ -0.72
KCNQ3-203ENST00000519589 BCAR3O75815 825 aa10.53□□□□□ -0.72
KCNQ3-203ENST00000519589 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.53□□□□□ -0.72
KCNQ3-203ENST00000519589 CLUAP1Q96AJ1 413 aa10.53□□□□□ -0.72
KCNQ3-203ENST00000519589 C3P01024 1663 aa10.53□□□□□ -0.72
KCNQ3-203ENST00000519589 C22orf23Q9BZE7 217 aa10.53□□□□□ -0.72
KCNQ3-203ENST00000519589 SLC12A5Q9H2X9 1139 aa10.53□□□□□ -0.72
KCNQ3-203ENST00000519589 NINLQ9Y2I6 1382 aa10.52□□□□□ -0.72
KCNQ3-203ENST00000519589 TULP2O00295 520 aa10.52□□□□□ -0.72
KCNQ3-203ENST00000519589 HMGN5P82970 282 aaKnown RBP10.52□□□□□ -0.73
KCNQ3-203ENST00000519589 ANKRD7Q92527 254 aa10.52□□□□□ -0.73
KCNQ3-203ENST00000519589 SECISBP2LQ93073 1101 aaKnown RBP10.52□□□□□ -0.73
KCNQ3-203ENST00000519589 KIF2CQ99661 725 aa10.52□□□□□ -0.73
KCNQ3-203ENST00000519589 PTMSP20962 102 aa10.51□□□□□ -0.73
KCNQ3-203ENST00000519589 PPP2R1AP30153 589 aa10.51□□□□□ -0.73
KCNQ3-203ENST00000519589 PDE3AQ14432 1141 aa10.51□□□□□ -0.73
KCNQ3-203ENST00000519589 CGNL1Q0VF96 1302 aa10.51□□□□□ -0.73
KCNQ3-203ENST00000519589 CLTCL1P53675 1640 aa10.51□□□□□ -0.73
KCNQ3-203ENST00000519589 MORC1Q86VD1 984 aa10.5□□□□□ -0.73
KCNQ3-203ENST00000519589 CGNQ9P2M7 1197 aaKnown RBP10.5□□□□□ -0.73
KCNQ3-203ENST00000519589 C14orf93Q9H972 538 aaKnown RBP10.5□□□□□ -0.73
KCNQ3-203ENST00000519589 RRP7AQ9Y3A4 280 aaKnown RBP10.5□□□□□ -0.73
KCNQ3-203ENST00000519589 PCDHB15Q9Y5E8 787 aa10.5□□□□□ -0.73
KCNQ3-203ENST00000519589 CAPN2P17655 700 aa10.5□□□□□ -0.73
KCNQ3-203ENST00000519589 ZC3H6P61129 1189 aaKnown RBP10.5□□□□□ -0.73
KCNQ3-203ENST00000519589 PRIMPOLQ96LW4 560 aa10.5□□□□□ -0.73
KCNQ3-203ENST00000519589 RNF216Q9NWF9 866 aaPredicted RBP10.5□□□□□ -0.73
KCNQ3-203ENST00000519589 PTPRTO14522 1441 aa10.5□□□□□ -0.73
KCNQ3-203ENST00000519589 GBP4Q96PP9 640 aa10.49□□□□□ -0.73
KCNQ3-203ENST00000519589 STRN4Q9NRL3 753 aa10.49□□□□□ -0.73
KCNQ3-203ENST00000519589 PDZRN3Q9UPQ7 1066 aa10.49□□□□□ -0.73
KCNQ3-203ENST00000519589 MROH1Q8NDA8 1641 aa10.49□□□□□ -0.73
KCNQ3-203ENST00000519589 ZSCAN23Q3MJ62 389 aa10.49□□□□□ -0.73
KCNQ3-203ENST00000519589 SLFN14P0C7P3 912 aa10.49□□□□□ -0.73
KCNQ3-203ENST00000519589 TESK2Q96S53 571 aa10.49□□□□□ -0.73
KCNQ3-203ENST00000519589 CD2BP2O95400 341 aaKnown RBP10.48□□□□□ -0.73
KCNQ3-203ENST00000519589 RPGRIP1LQ68CZ1 1315 aa10.48□□□□□ -0.73
KCNQ3-203ENST00000519589 NPC1L1Q9UHC9 1359 aa10.48□□□□□ -0.73
KCNQ3-203ENST00000519589 TET3O43151 1660 aa10.48□□□□□ -0.73
KCNQ3-203ENST00000519589 MMP14P50281 582 aa10.48□□□□□ -0.73
KCNQ3-203ENST00000519589 CFAP53Q96M91 514 aa10.48□□□□□ -0.73
KCNQ3-203ENST00000519589 BCL2L13Q9BXK5 485 aa10.48□□□□□ -0.73
KCNQ3-203ENST00000519589 LTV1Q96GA3 475 aaPredicted RBP10.48□□□□□ -0.73
KCNQ3-203ENST00000519589 BCL2L12Q9HB09 334 aa10.48□□□□□ -0.73
KCNQ3-203ENST00000519589 CSB-PGBD3P0DP91 1061 aa10.47□□□□□ -0.73
KCNQ3-203ENST00000519589 PRIM1P49642 420 aaKnown RBP10.47□□□□□ -0.73
KCNQ3-203ENST00000519589 COG6Q9Y2V7 657 aa10.47□□□□□ -0.73
KCNQ3-203ENST00000519589 TRPM2O94759 1503 aa10.47□□□□□ -0.73
KCNQ3-203ENST00000519589 SPDYE4A6NLX3 237 aa10.46□□□□□ -0.73
KCNQ3-203ENST00000519589 IGSF3O75054 1194 aa10.46□□□□□ -0.73
KCNQ3-203ENST00000519589 CYP2E1P05181 493 aaPredicted RBP10.46□□□□□ -0.73
KCNQ3-203ENST00000519589 CDK19Q9BWU1 502 aa10.46□□□□□ -0.73
KCNQ3-203ENST00000519589 PHF8Q9UPP1 1060 aa10.46□□□□□ -0.73
KCNQ3-203ENST00000519589 RNF17Q9BXT8 1623 aaKnown RBP10.46□□□□□ -0.73
KCNQ3-203ENST00000519589 SPTLC3Q9NUV7 552 aa10.46□□□□□ -0.73
KCNQ3-203ENST00000519589 U2SURPO15042 1029 aaKnown RBP10.46□□□□□ -0.74
KCNQ3-203ENST00000519589 CTIFO43310 598 aaKnown RBP10.46□□□□□ -0.74
KCNQ3-203ENST00000519589 BAG4O95429 457 aaKnown RBP10.46□□□□□ -0.74
KCNQ3-203ENST00000519589 SSFA2P28290 1259 aa10.46□□□□□ -0.74
KCNQ3-203ENST00000519589 KRT28Q7Z3Y7 464 aa10.46□□□□□ -0.74
KCNQ3-203ENST00000519589 HSCBQ8IWL3 235 aa10.46□□□□□ -0.74
KCNQ3-203ENST00000519589 LMBRD1Q9NUN5 540 aa10.46□□□□□ -0.74
KCNQ3-203ENST00000519589 CCDC39Q9UFE4 941 aa10.46□□□□□ -0.74
KCNQ3-203ENST00000519589 PLEKHG1Q9ULL1 1385 aa10.46□□□□□ -0.74
KCNQ3-203ENST00000519589 CHRNA2Q15822 529 aa10.45□□□□□ -0.74
KCNQ3-203ENST00000519589 BRINP3Q76B58 766 aa10.45□□□□□ -0.74
KCNQ3-203ENST00000519589 ABTB2Q8N961 1025 aa10.45□□□□□ -0.74
KCNQ3-203ENST00000519589 MYOM1P52179 1685 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms