RNA–Protein interactions for RNA: ENST00000519470.1

MCM4-208, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-208ENST00000519470 SBF2Q86WG5 1849 aa16.86■□□□□ 0.29
MCM4-208ENST00000519470 ARHGEF25Q86VW2 580 aa16.85■□□□□ 0.29
MCM4-208ENST00000519470 WDR17Q8IZU2 1322 aa16.85■□□□□ 0.29
MCM4-208ENST00000519470 ABCC6O95255 1503 aa16.85■□□□□ 0.29
MCM4-208ENST00000519470 MON2Q7Z3U7 1717 aa16.84■□□□□ 0.29
MCM4-208ENST00000519470 KCNH5Q8NCM2 988 aa16.84■□□□□ 0.29
MCM4-208ENST00000519470 AXIN2Q9Y2T1 843 aa16.84■□□□□ 0.29
MCM4-208ENST00000519470 NFAT5O94916 1531 aa16.84■□□□□ 0.29
MCM4-208ENST00000519470 USP54Q70EL1 1684 aa16.84■□□□□ 0.29
MCM4-208ENST00000519470 BCL9O00512 1426 aa16.83■□□□□ 0.28
MCM4-208ENST00000519470 RGPD5Q99666 1765 aa16.83■□□□□ 0.28
MCM4-208ENST00000519470 NEUROD1Q13562 356 aa16.82■□□□□ 0.28
MCM4-208ENST00000519470 TOM1L2Q6ZVM7 507 aa16.82■□□□□ 0.28
MCM4-208ENST00000519470 CDCA7Q9BWT1 371 aaPredicted RBP16.82■□□□□ 0.28
MCM4-208ENST00000519470 ZBTB7CA1YPR0 619 aa16.81■□□□□ 0.28
MCM4-208ENST00000519470 DDB1Q16531 1140 aa16.81■□□□□ 0.28
MCM4-208ENST00000519470 KTN1Q86UP2 1357 aaKnown RBP16.8■□□□□ 0.28
MCM4-208ENST00000519470 PLSCR1O15162 318 aa16.8■□□□□ 0.28
MCM4-208ENST00000519470 NBPF14Q5TI25 921 aa16.8■□□□□ 0.28
MCM4-208ENST00000519470 CD163L1Q9NR16 1453 aa16.8■□□□□ 0.28
MCM4-208ENST00000519470 USP31Q70CQ4 1352 aa16.79■□□□□ 0.28
MCM4-208ENST00000519470 CARD10Q9BWT7 1032 aa16.79■□□□□ 0.28
MCM4-208ENST00000519470 BCL11BQ9C0K0 894 aaPredicted RBP16.77■□□□□ 0.28
MCM4-208ENST00000519470 CCDC7Q96M83 1385 aa16.77■□□□□ 0.27
MCM4-208ENST00000519470 MARCH10Q8NA82 808 aaPredicted RBP16.76■□□□□ 0.27
MCM4-208ENST00000519470 CARD11Q9BXL7 1154 aa16.75■□□□□ 0.27
MCM4-208ENST00000519470 TNS2Q63HR2 1409 aa16.74■□□□□ 0.27
MCM4-208ENST00000519470 SOX12O15370 315 aa16.73■□□□□ 0.27
MCM4-208ENST00000519470 CSB-PGBD3P0DP91 1061 aa16.73■□□□□ 0.27
MCM4-208ENST00000519470 PUS7Q96PZ0 661 aaKnown RBP16.73■□□□□ 0.27
MCM4-208ENST00000519470 LTN1O94822 1766 aa16.73■□□□□ 0.27
MCM4-208ENST00000519470 EDC4Q6P2E9 1401 aaKnown RBP16.72■□□□□ 0.27
MCM4-208ENST00000519470 CASZ1Q86V15 1759 aa16.72■□□□□ 0.27
MCM4-208ENST00000519470 ERBB3P21860 1342 aa16.71■□□□□ 0.27
MCM4-208ENST00000519470 PTF1AQ7RTS3 328 aa16.71■□□□□ 0.27
MCM4-208ENST00000519470 SPON1Q9HCB6 807 aa16.71■□□□□ 0.27
MCM4-208ENST00000519470 NHSQ6T4R5 1651 aa16.7■□□□□ 0.26
MCM4-208ENST00000519470 TONSLQ96HA7 1378 aa16.7■□□□□ 0.26
MCM4-208ENST00000519470 EXOC5O00471 708 aa16.7■□□□□ 0.26
MCM4-208ENST00000519470 KCNQ2O43526 872 aa16.7■□□□□ 0.26
MCM4-208ENST00000519470 HDGFL2Q7Z4V5 671 aaPredicted RBP16.7■□□□□ 0.26
MCM4-208ENST00000519470 NME9Q86XW9 330 aa16.7■□□□□ 0.26
MCM4-208ENST00000519470 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.7■□□□□ 0.26
MCM4-208ENST00000519470 PROM2Q8N271 834 aa16.7■□□□□ 0.26
MCM4-208ENST00000519470 ANO8Q9HCE9 1232 aaPredicted RBP16.7■□□□□ 0.26
MCM4-208ENST00000519470 A0A1W2PP64 1363 aa16.69■□□□□ 0.26
MCM4-208ENST00000519470 SLC12A5Q9H2X9 1139 aa16.68■□□□□ 0.26
MCM4-208ENST00000519470 NINLQ9Y2I6 1382 aa16.67■□□□□ 0.26
MCM4-208ENST00000519470 TMC1Q8TDI8 760 aa16.67■□□□□ 0.26
MCM4-208ENST00000519470 TERF2IPQ9NYB0 399 aa16.67■□□□□ 0.26
MCM4-208ENST00000519470 FAM208AQ9UK61 1670 aaKnown RBP16.65■□□□□ 0.26
MCM4-208ENST00000519470 IL2RBP14784 551 aa16.65■□□□□ 0.26
MCM4-208ENST00000519470 TXNRD1Q16881 649 aa16.65■□□□□ 0.26
MCM4-208ENST00000519470 TESK2Q96S53 571 aa16.65■□□□□ 0.26
MCM4-208ENST00000519470 ANKRD24Q8TF21 1146 aa16.64■□□□□ 0.25
MCM4-208ENST00000519470 NLRP2Q9NX02 1062 aa16.64■□□□□ 0.25
MCM4-208ENST00000519470 PAPPAQ13219 1627 aa16.63■□□□□ 0.25
MCM4-208ENST00000519470 SLC24A1O60721 1099 aa16.63■□□□□ 0.25
MCM4-208ENST00000519470 PPP1R1BQ9UD71 204 aaPredicted RBP16.63■□□□□ 0.25
MCM4-208ENST00000519470 IP6K1Q92551 441 aa16.62■□□□□ 0.25
MCM4-208ENST00000519470 BTAF1O14981 1849 aa16.61■□□□□ 0.25
MCM4-208ENST00000519470 SLC15A2Q16348 729 aa16.61■□□□□ 0.25
MCM4-208ENST00000519470 PDGFDQ9GZP0 370 aaPredicted RBP16.61■□□□□ 0.25
MCM4-208ENST00000519470 STK32BQ9NY57 414 aa16.61■□□□□ 0.25
MCM4-208ENST00000519470 ST20-MTHFSA0A0A6YYL1 179 aa16.6■□□□□ 0.25
MCM4-208ENST00000519470 PTGER2P43116 358 aa16.6■□□□□ 0.25
MCM4-208ENST00000519470 MYOM1P52179 1685 aa16.59■□□□□ 0.25
MCM4-208ENST00000519470 ACSBG1Q96GR2 724 aa16.59■□□□□ 0.25
MCM4-208ENST00000519470 ANKRD36BQ8N2N9 1353 aa16.58■□□□□ 0.24
MCM4-208ENST00000519470 ZBTB7AO95365 584 aa16.57■□□□□ 0.24
MCM4-208ENST00000519470 COG3Q96JB2 828 aa16.57■□□□□ 0.24
MCM4-208ENST00000519470 MAP3K19Q56UN5 1328 aa16.56■□□□□ 0.24
MCM4-208ENST00000519470 SGIP1Q9BQI5 828 aa16.56■□□□□ 0.24
MCM4-208ENST00000519470 MTFR1LQ9H019 292 aa16.56■□□□□ 0.24
MCM4-208ENST00000519470 KAT6BQ8WYB5 2073 aa16.56■□□□□ 0.24
MCM4-208ENST00000519470 RTL1A6NKG5 1358 aa16.55■□□□□ 0.24
MCM4-208ENST00000519470 YY1P25490 414 aa16.55■□□□□ 0.24
MCM4-208ENST00000519470 HOXC9P31274 260 aa16.55■□□□□ 0.24
MCM4-208ENST00000519470 SHANK3Q9BYB0 1731 aa16.55■□□□□ 0.24
MCM4-208ENST00000519470 QSER1Q2KHR3 1735 aa16.54■□□□□ 0.24
MCM4-208ENST00000519470 DCAF8L1A6NGE4 600 aa16.54■□□□□ 0.24
MCM4-208ENST00000519470 RGPD2P0DJD1 1756 aa16.54■□□□□ 0.24
MCM4-208ENST00000519470 LRRC4BQ9NT99 713 aa16.53■□□□□ 0.24
MCM4-208ENST00000519470 ATF5Q9Y2D1 282 aaPredicted RBP16.53■□□□□ 0.24
MCM4-208ENST00000519470 USP47Q96K76 1375 aa16.51■□□□□ 0.23
MCM4-208ENST00000519470 MEGF6O75095 1541 aa16.51■□□□□ 0.23
MCM4-208ENST00000519470 LY75O60449 1722 aa16.51■□□□□ 0.23
MCM4-208ENST00000519470 DOT1LQ8TEK3 1739 aa16.51■□□□□ 0.23
MCM4-208ENST00000519470 AMPHP49418 695 aa16.51■□□□□ 0.23
MCM4-208ENST00000519470 TMF1P82094 1093 aa16.51■□□□□ 0.23
MCM4-208ENST00000519470 ZNF827Q17R98 1081 aa16.51■□□□□ 0.23
MCM4-208ENST00000519470 SLC27A3Q5K4L6 730 aa16.51■□□□□ 0.23
MCM4-208ENST00000519470 LTV1Q96GA3 475 aaPredicted RBP16.51■□□□□ 0.23
MCM4-208ENST00000519470 MAP3K5Q99683 1374 aa16.51■□□□□ 0.23
MCM4-208ENST00000519470 COL24A1Q17RW2 1714 aa16.5■□□□□ 0.23
MCM4-208ENST00000519470 FYB1O15117 783 aa16.5■□□□□ 0.23
MCM4-208ENST00000519470 FBLN1P23142 703 aa16.5■□□□□ 0.23
MCM4-208ENST00000519470 DDX54Q8TDD1 881 aaKnown RBP16.5■□□□□ 0.23
MCM4-208ENST00000519470 AKT1S1Q96B36 256 aa16.5■□□□□ 0.23
MCM4-208ENST00000519470 NSD2O96028 1365 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms