RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 NBPF14Q5TI25 921 aa7.45□□□□□ -1.22
CTNNA1-212ENST00000518919 RNF135Q8IUD6 432 aa7.45□□□□□ -1.22
CTNNA1-212ENST00000518919 GPKOWQ92917 476 aaPredicted RBP eCLIP7.45□□□□□ -1.22
CTNNA1-212ENST00000518919 NUDT12Q9BQG2 462 aa7.45□□□□□ -1.22
CTNNA1-212ENST00000518919 GPSM3Q9Y4H4 160 aa7.45□□□□□ -1.22
CTNNA1-212ENST00000518919 FAM196BA6NMK8 535 aa7.44□□□□□ -1.22
CTNNA1-212ENST00000518919 HRO43593 1189 aa7.44□□□□□ -1.22
CTNNA1-212ENST00000518919 DXOO77932 396 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-212ENST00000518919 GNEQ9Y223 722 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-212ENST00000518919 KIF21BO75037 1637 aa7.44□□□□□ -1.22
CTNNA1-212ENST00000518919 PRDM2Q13029 1718 aa7.44□□□□□ -1.22
CTNNA1-212ENST00000518919 GOLGA3Q08378 1498 aa7.43□□□□□ -1.22
CTNNA1-212ENST00000518919 KCNH2Q12809 1159 aa7.43□□□□□ -1.22
CTNNA1-212ENST00000518919 NCOA4Q13772 614 aa7.43□□□□□ -1.22
CTNNA1-212ENST00000518919 CRTC2Q53ET0 693 aaPredicted RBP7.43□□□□□ -1.22
CTNNA1-212ENST00000518919 PDXDC2PQ6P474 469 aa7.43□□□□□ -1.22
CTNNA1-212ENST00000518919 LARP1Q6PKG0 1096 aaKnown RBP7.43□□□□□ -1.22
CTNNA1-212ENST00000518919 WNT2BQ93097 391 aa7.43□□□□□ -1.22
CTNNA1-212ENST00000518919 CEP126Q9P2H0 1117 aa7.43□□□□□ -1.22
CTNNA1-212ENST00000518919 MKRN1Q9UHC7 482 aaKnown RBP7.43□□□□□ -1.22
CTNNA1-212ENST00000518919 TNIKQ9UKE5 1360 aa7.43□□□□□ -1.22
CTNNA1-212ENST00000518919 CADPSQ9ULU8 1353 aa7.43□□□□□ -1.22
CTNNA1-212ENST00000518919 CEP162Q5TB80 1403 aa7.43□□□□□ -1.22
CTNNA1-212ENST00000518919 ATP5J2-PTCD1G3V325 749 aa7.42□□□□□ -1.22
CTNNA1-212ENST00000518919 RASA1P20936 1047 aa7.42□□□□□ -1.22
CTNNA1-212ENST00000518919 MCCD1P59942 119 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-212ENST00000518919 PLPP7Q8NBV4 271 aa7.42□□□□□ -1.22
CTNNA1-212ENST00000518919 CCER1Q8TC90 406 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-212ENST00000518919 ZNF428Q96B54 188 aa7.42□□□□□ -1.22
CTNNA1-212ENST00000518919 SPSB2Q99619 263 aa7.42□□□□□ -1.22
CTNNA1-212ENST00000518919 PRDM9Q9NQV7 894 aa7.42□□□□□ -1.22
CTNNA1-212ENST00000518919 EVA1BQ9NVM1 165 aa7.42□□□□□ -1.22
CTNNA1-212ENST00000518919 CEP164Q9UPV0 1460 aa7.42□□□□□ -1.22
CTNNA1-212ENST00000518919 ARHGAP9Q9BRR9 750 aa7.41□□□□□ -1.22
CTNNA1-212ENST00000518919 PCGF6Q9BYE7 350 aa7.41□□□□□ -1.22
CTNNA1-212ENST00000518919 POTEB3A0JP26 581 aa7.4□□□□□ -1.22
CTNNA1-212ENST00000518919 MMP16P51512 607 aa7.4□□□□□ -1.22
CTNNA1-212ENST00000518919 COPS2P61201 443 aa7.4□□□□□ -1.22
CTNNA1-212ENST00000518919 PTK7Q13308 1070 aa7.4□□□□□ -1.22
CTNNA1-212ENST00000518919 EML3Q32P44 896 aa7.4□□□□□ -1.22
CTNNA1-212ENST00000518919 POTEBQ6S5H4 581 aa7.4□□□□□ -1.22
CTNNA1-212ENST00000518919 FAM160A2Q8N612 972 aaPredicted RBP7.4□□□□□ -1.22
CTNNA1-212ENST00000518919 ADAM32Q8TC27 787 aa7.4□□□□□ -1.22
CTNNA1-212ENST00000518919 OCSTAMPQ9BR26 566 aa7.4□□□□□ -1.22
CTNNA1-212ENST00000518919 LZTS3O60299 673 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-212ENST00000518919 ANKRD13DQ6ZTN6 518 aa7.39□□□□□ -1.23
CTNNA1-212ENST00000518919 FAM200AQ8TCP9 573 aa7.39□□□□□ -1.23
CTNNA1-212ENST00000518919 WBP1LQ9NX94 342 aa7.39□□□□□ -1.23
CTNNA1-212ENST00000518919 MYT1LQ9UL68 1186 aa7.39□□□□□ -1.23
CTNNA1-212ENST00000518919 RAPGEF2Q9Y4G8 1499 aa7.38□□□□□ -1.23
CTNNA1-212ENST00000518919 MAP7D1Q3KQU3 841 aa7.38□□□□□ -1.23
CTNNA1-212ENST00000518919 ZBTB33Q86T24 672 aa7.38□□□□□ -1.23
CTNNA1-212ENST00000518919 TXNDC2Q86VQ3 553 aa7.38□□□□□ -1.23
CTNNA1-212ENST00000518919 TRIM50Q86XT4 487 aa7.38□□□□□ -1.23
CTNNA1-212ENST00000518919 ANKMY2Q8IV38 441 aa7.38□□□□□ -1.23
CTNNA1-212ENST00000518919 CLP1Q92989 425 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-212ENST00000518919 TLL1O43897 1013 aa7.37□□□□□ -1.23
CTNNA1-212ENST00000518919 ADH1BP00325 375 aa7.37□□□□□ -1.23
CTNNA1-212ENST00000518919 LHX8Q68G74 356 aa7.37□□□□□ -1.23
CTNNA1-212ENST00000518919 PHLDB3Q6NSJ2 640 aa7.37□□□□□ -1.23
CTNNA1-212ENST00000518919 PHTF2Q8N3S3 785 aa7.37□□□□□ -1.23
CTNNA1-212ENST00000518919 OGFOD1Q8N543 542 aa7.37□□□□□ -1.23
CTNNA1-212ENST00000518919 ZNF594Q96JF6 807 aaPredicted RBP7.37□□□□□ -1.23
CTNNA1-212ENST00000518919 CDCA7Q9BWT1 371 aaPredicted RBP7.37□□□□□ -1.23
CTNNA1-212ENST00000518919 CARD14Q9BXL6 1004 aa7.37□□□□□ -1.23
CTNNA1-212ENST00000518919 UNC93B1Q9H1C4 597 aa7.37□□□□□ -1.23
CTNNA1-212ENST00000518919 AMOTL2Q9Y2J4 779 aa7.37□□□□□ -1.23
CTNNA1-212ENST00000518919 PRXQ9BXM0 1461 aa7.36□□□□□ -1.23
CTNNA1-212ENST00000518919 FANCD2Q9BXW9 1451 aa7.36□□□□□ -1.23
CTNNA1-212ENST00000518919 E9PSI1 815 aa7.36□□□□□ -1.23
CTNNA1-212ENST00000518919 ATP2B4P23634 1241 aa7.36□□□□□ -1.23
CTNNA1-212ENST00000518919 SSFA2P28290 1259 aa7.36□□□□□ -1.23
CTNNA1-212ENST00000518919 ARID4AP29374 1257 aaPredicted RBP7.36□□□□□ -1.23
CTNNA1-212ENST00000518919 ATP1A2P50993 1020 aa7.36□□□□□ -1.23
CTNNA1-212ENST00000518919 DPYDQ12882 1025 aa7.36□□□□□ -1.23
CTNNA1-212ENST00000518919 SH3BP5LQ7L8J4 393 aa7.36□□□□□ -1.23
CTNNA1-212ENST00000518919 DZIP3Q86Y13 1208 aaKnown RBP7.36□□□□□ -1.23
CTNNA1-212ENST00000518919 CCDC24Q8N4L8 307 aa7.36□□□□□ -1.23
CTNNA1-212ENST00000518919 DOLKQ9UPQ8 538 aa7.36□□□□□ -1.23
CTNNA1-212ENST00000518919 NOD1Q9Y239 953 aa7.36□□□□□ -1.23
CTNNA1-212ENST00000518919 NESP48681 1621 aa7.35□□□□□ -1.23
CTNNA1-212ENST00000518919 MAGEB6P1A0A0J9YX57 407 aa7.35□□□□□ -1.23
CTNNA1-212ENST00000518919 FAM69CQ0P6D2 419 aa7.35□□□□□ -1.23
CTNNA1-212ENST00000518919 SWI5Q1ZZU3 235 aa7.35□□□□□ -1.23
CTNNA1-212ENST00000518919 TRAF7Q6Q0C0 670 aa7.35□□□□□ -1.23
CTNNA1-212ENST00000518919 FAM163AQ96GL9 167 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-212ENST00000518919 DNAAF2Q9NVR5 837 aaKnown RBP7.35□□□□□ -1.23
CTNNA1-212ENST00000518919 SLAIN2Q9P270 581 aa7.35□□□□□ -1.23
CTNNA1-212ENST00000518919 CHIC2Q9UKJ5 165 aa7.35□□□□□ -1.23
CTNNA1-212ENST00000518919 ERICH3Q5RHP9 1530 aa7.35□□□□□ -1.23
CTNNA1-212ENST00000518919 CLDN10P78369 228 aa7.34□□□□□ -1.23
CTNNA1-212ENST00000518919 OXLD1Q5BKU9 147 aa7.34□□□□□ -1.23
CTNNA1-212ENST00000518919 FGD5Q6ZNL6 1462 aa7.34□□□□□ -1.23
CTNNA1-212ENST00000518919 KIF27Q86VH2 1401 aa7.34□□□□□ -1.23
CTNNA1-212ENST00000518919 ZPR1O75312 459 aa7.33□□□□□ -1.24
CTNNA1-212ENST00000518919 AGERQ15109 404 aa7.33□□□□□ -1.24
CTNNA1-212ENST00000518919 THSD4Q6ZMP0 1018 aa7.33□□□□□ -1.24
CTNNA1-212ENST00000518919 RBM19Q9Y4C8 960 aaKnown RBP7.33□□□□□ -1.24
CTNNA1-212ENST00000518919 DNMBPQ6XZF7 1577 aa7.33□□□□□ -1.24
CTNNA1-212ENST00000518919 SERPINB4P48594 390 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms