RNA–Protein interactions for RNA: ENST00000518910.5

CTNNA1-211, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-211ENST00000518910 FNBP4Q8N3X1 1017 aaPredicted RBP16.83■□□□□ 0.28
CTNNA1-211ENST00000518910 GLI3P10071 1580 aa16.82■□□□□ 0.28
CTNNA1-211ENST00000518910 ATRNO75882 1429 aa16.82■□□□□ 0.28
CTNNA1-211ENST00000518910 PPM1GO15355 546 aaPredicted RBP16.82■□□□□ 0.28
CTNNA1-211ENST00000518910 RXRBP28702 533 aa16.82■□□□□ 0.28
CTNNA1-211ENST00000518910 CC2D1BQ5T0F9 858 aaKnown RBP16.82■□□□□ 0.28
CTNNA1-211ENST00000518910 KCNH5Q8NCM2 988 aa16.82■□□□□ 0.28
CTNNA1-211ENST00000518910 TRPC5Q9UL62 973 aaPredicted RBP16.82■□□□□ 0.28
CTNNA1-211ENST00000518910 KNSTRNQ9Y448 316 aa16.82■□□□□ 0.28
CTNNA1-211ENST00000518910 CSB-PGBD3P0DP91 1061 aa16.81■□□□□ 0.28
CTNNA1-211ENST00000518910 PEAK1Q9H792 1746 aa16.81■□□□□ 0.28
CTNNA1-211ENST00000518910 LARP1Q6PKG0 1096 aaKnown RBP16.8■□□□□ 0.28
CTNNA1-211ENST00000518910 AXIN2Q9Y2T1 843 aa16.8■□□□□ 0.28
CTNNA1-211ENST00000518910 CPDO75976 1380 aa16.79■□□□□ 0.28
CTNNA1-211ENST00000518910 AMPHP49418 695 aa16.79■□□□□ 0.28
CTNNA1-211ENST00000518910 ARHGEF25Q86VW2 580 aa16.79■□□□□ 0.28
CTNNA1-211ENST00000518910 MAP3K19Q56UN5 1328 aa16.78■□□□□ 0.28
CTNNA1-211ENST00000518910 COL5A2P05997 1499 aaPredicted RBP16.78■□□□□ 0.28
CTNNA1-211ENST00000518910 RGS12O14924 1447 aa16.78■□□□□ 0.28
CTNNA1-211ENST00000518910 KAT6BQ8WYB5 2073 aa16.77■□□□□ 0.28
CTNNA1-211ENST00000518910 WNK3Q9BYP7 1800 aa16.77■□□□□ 0.28
CTNNA1-211ENST00000518910 RBM6P78332 1123 aaKnown RBP16.77■□□□□ 0.28
CTNNA1-211ENST00000518910 DDX10Q13206 875 aaKnown RBP16.77■□□□□ 0.28
CTNNA1-211ENST00000518910 FAM98CQ17RN3 349 aaKnown RBP16.77■□□□□ 0.28
CTNNA1-211ENST00000518910 GJD4Q96KN9 370 aaPredicted RBP16.77■□□□□ 0.28
CTNNA1-211ENST00000518910 EMILIN1Q9Y6C2 1016 aa16.77■□□□□ 0.28
CTNNA1-211ENST00000518910 TOM1L2Q6ZVM7 507 aa16.76■□□□□ 0.27
CTNNA1-211ENST00000518910 MORC1Q86VD1 984 aa16.76■□□□□ 0.27
CTNNA1-211ENST00000518910 AATKQ6ZMQ8 1374 aa16.76■□□□□ 0.27
CTNNA1-211ENST00000518910 VPS72Q15906 364 aa16.75■□□□□ 0.27
CTNNA1-211ENST00000518910 ANKRD24Q8TF21 1146 aa16.73■□□□□ 0.27
CTNNA1-211ENST00000518910 NLRP2Q9NX02 1062 aa16.73■□□□□ 0.27
CTNNA1-211ENST00000518910 SPATA31A5Q5VU36 1347 aa16.72■□□□□ 0.27
CTNNA1-211ENST00000518910 SPATA31A7Q8IWB4 1347 aa16.72■□□□□ 0.27
CTNNA1-211ENST00000518910 HOXC9P31274 260 aa16.72■□□□□ 0.27
CTNNA1-211ENST00000518910 AMER1Q5JTC6 1135 aaPredicted RBP16.72■□□□□ 0.27
CTNNA1-211ENST00000518910 USHBP1Q8N6Y0 703 aa16.71■□□□□ 0.27
CTNNA1-211ENST00000518910 SPATA31A1Q5TZJ5 1347 aa16.7■□□□□ 0.26
CTNNA1-211ENST00000518910 FAM208AQ9UK61 1670 aaKnown RBP16.7■□□□□ 0.26
CTNNA1-211ENST00000518910 HSP90AB2PQ58FF8 381 aa16.7■□□□□ 0.26
CTNNA1-211ENST00000518910 FAM182BQ5T319 152 aa16.7■□□□□ 0.26
CTNNA1-211ENST00000518910 SEPT12Q8IYM1 358 aa16.7■□□□□ 0.26
CTNNA1-211ENST00000518910 IP6K1Q92551 441 aa16.7■□□□□ 0.26
CTNNA1-211ENST00000518910 CRB1P82279 1406 aa16.7■□□□□ 0.26
CTNNA1-211ENST00000518910 WDR17Q8IZU2 1322 aa16.7■□□□□ 0.26
CTNNA1-211ENST00000518910 PER1O15534 1290 aaPredicted RBP16.69■□□□□ 0.26
CTNNA1-211ENST00000518910 NSD2O96028 1365 aa16.68■□□□□ 0.26
CTNNA1-211ENST00000518910 THSD7AQ9UPZ6 1657 aa16.68■□□□□ 0.26
CTNNA1-211ENST00000518910 ERBB3P21860 1342 aa16.68■□□□□ 0.26
CTNNA1-211ENST00000518910 ABCC6O95255 1503 aa16.67■□□□□ 0.26
CTNNA1-211ENST00000518910 TCP11L2Q8N4U5 519 aa16.67■□□□□ 0.26
CTNNA1-211ENST00000518910 POLKQ9UBT6 870 aa16.67■□□□□ 0.26
CTNNA1-211ENST00000518910 LRRC37A3O60309 1634 aa16.67■□□□□ 0.26
CTNNA1-211ENST00000518910 FLT4P35916 1363 aa16.66■□□□□ 0.26
CTNNA1-211ENST00000518910 ZNF316A6NFI3 1004 aaPredicted RBP16.66■□□□□ 0.26
CTNNA1-211ENST00000518910 BLMP54132 1417 aaPredicted RBP16.66■□□□□ 0.26
CTNNA1-211ENST00000518910 SMG6Q86US8 1419 aaKnown RBP16.65■□□□□ 0.26
CTNNA1-211ENST00000518910 PARP4Q9UKK3 1724 aaKnown RBP16.65■□□□□ 0.26
CTNNA1-211ENST00000518910 RTL1A6NKG5 1358 aa16.64■□□□□ 0.26
CTNNA1-211ENST00000518910 CDK12Q9NYV4 1490 aaPredicted RBP16.64■□□□□ 0.25
CTNNA1-211ENST00000518910 CARD10Q9BWT7 1032 aa16.62■□□□□ 0.25
CTNNA1-211ENST00000518910 MTHFSP49914 203 aa16.61■□□□□ 0.25
CTNNA1-211ENST00000518910 NBPF6Q5VWK0 638 aa16.61■□□□□ 0.25
CTNNA1-211ENST00000518910 KRT27Q7Z3Y8 459 aa16.61■□□□□ 0.25
CTNNA1-211ENST00000518910 NBPF4Q96M43 638 aa16.61■□□□□ 0.25
CTNNA1-211ENST00000518910 INSRP06213 1382 aa16.61■□□□□ 0.25
CTNNA1-211ENST00000518910 EIF4A2Q14240 407 aaKnown RBP16.6■□□□□ 0.25
CTNNA1-211ENST00000518910 PDE3BQ13370 1112 aa16.59■□□□□ 0.25
CTNNA1-211ENST00000518910 SHANK3Q9BYB0 1731 aa16.59■□□□□ 0.25
CTNNA1-211ENST00000518910 EP400Q96L91 3159 aa16.58■□□□□ 0.24
CTNNA1-211ENST00000518910 MEGF6O75095 1541 aa16.58■□□□□ 0.24
CTNNA1-211ENST00000518910 SBF2Q86WG5 1849 aa16.58■□□□□ 0.24
CTNNA1-211ENST00000518910 DDB1Q16531 1140 aa16.57■□□□□ 0.24
CTNNA1-211ENST00000518910 BARGINQ6ZT62 677 aa16.57■□□□□ 0.24
CTNNA1-211ENST00000518910 SOCS7O14512 581 aa16.56■□□□□ 0.24
CTNNA1-211ENST00000518910 IL2RBP14784 551 aa16.56■□□□□ 0.24
CTNNA1-211ENST00000518910 EYA1Q99502 592 aa16.56■□□□□ 0.24
CTNNA1-211ENST00000518910 THRAP3Q9Y2W1 955 aaKnown RBP16.56■□□□□ 0.24
CTNNA1-211ENST00000518910 DISP2A7MBM2 1401 aa16.55■□□□□ 0.24
CTNNA1-211ENST00000518910 NPC1L1Q9UHC9 1359 aa16.55■□□□□ 0.24
CTNNA1-211ENST00000518910 PPP2R1AP30153 589 aa16.55■□□□□ 0.24
CTNNA1-211ENST00000518910 DDX54Q8TDD1 881 aaKnown RBP16.55■□□□□ 0.24
CTNNA1-211ENST00000518910 KIF24Q5T7B8 1368 aa16.54■□□□□ 0.24
CTNNA1-211ENST00000518910 U2SURPO15042 1029 aaKnown RBP16.54■□□□□ 0.24
CTNNA1-211ENST00000518910 ONECUT3O60422 494 aaPredicted RBP16.54■□□□□ 0.24
CTNNA1-211ENST00000518910 AEBP1Q8IUX7 1158 aa16.54■□□□□ 0.24
CTNNA1-211ENST00000518910 RAPGEF4Q8WZA2 1011 aa16.54■□□□□ 0.24
CTNNA1-211ENST00000518910 VIRMAQ69YN4 1812 aaKnown RBP16.54■□□□□ 0.24
CTNNA1-211ENST00000518910 HMOX1P09601 288 aa16.53■□□□□ 0.24
CTNNA1-211ENST00000518910 RGPD1P0DJD0 1748 aa16.53■□□□□ 0.24
CTNNA1-211ENST00000518910 DOT1LQ8TEK3 1739 aa16.53■□□□□ 0.24
CTNNA1-211ENST00000518910 TNS2Q63HR2 1409 aa16.53■□□□□ 0.24
CTNNA1-211ENST00000518910 EXOC5O00471 708 aa16.52■□□□□ 0.24
CTNNA1-211ENST00000518910 TNS1Q9HBL0 1735 aaKnown RBP16.51■□□□□ 0.23
CTNNA1-211ENST00000518910 TRIM37O94972 964 aa16.51■□□□□ 0.23
CTNNA1-211ENST00000518910 TATP17735 454 aaPredicted RBP16.51■□□□□ 0.23
CTNNA1-211ENST00000518910 UPF1Q92900 1129 aaKnown RBP eCLIP16.51■□□□□ 0.23
CTNNA1-211ENST00000518910 ACSBG1Q96GR2 724 aa16.51■□□□□ 0.23
CTNNA1-211ENST00000518910 PARD3Q8TEW0 1356 aa16.51■□□□□ 0.23
CTNNA1-211ENST00000518910 COL3A1P02461 1466 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 207 ms