RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, human

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-208	ENST00000518877	ERFE	Q4G0M1	354 aa		7.48	□□□□□ -1.21
PCM1-208	ENST00000518877	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	7.48	□□□□□ -1.21
PCM1-208	ENST00000518877	GPR161	Q8N6U8	529 aa	Known RBP	7.48	□□□□□ -1.21
PCM1-208	ENST00000518877	KCTD17	Q8N5Z5	321 aa		7.47	□□□□□ -1.21
PCM1-208	ENST00000518877	SLC10A4	Q96EP9	437 aa		7.47	□□□□□ -1.21
PCM1-208	ENST00000518877	ARHGAP9	Q9BRR9	750 aa		7.47	□□□□□ -1.21
PCM1-208	ENST00000518877	POLR3E	Q9NVU0	708 aa		7.47	□□□□□ -1.21
PCM1-208	ENST00000518877	KRT76	Q01546	638 aa		7.46	□□□□□ -1.22
PCM1-208	ENST00000518877	ZBTB33	Q86T24	672 aa		7.46	□□□□□ -1.22
PCM1-208	ENST00000518877	CCDC155	Q8N6L0	562 aa		7.46	□□□□□ -1.22
PCM1-208	ENST00000518877	RSPH6A	Q9H0K4	717 aa		7.46	□□□□□ -1.22
PCM1-208	ENST00000518877	RNF225	M0QZC1	329 aa	Predicted RBP	7.45	□□□□□ -1.22
PCM1-208	ENST00000518877	CTDSPL2	Q05D32	466 aa		7.45	□□□□□ -1.22
PCM1-208	ENST00000518877	KCTD15	Q96SI1	283 aa	Predicted RBP	7.45	□□□□□ -1.22
PCM1-208	ENST00000518877	COL25A1	Q9BXS0	654 aa	Predicted RBP	7.45	□□□□□ -1.22
PCM1-208	ENST00000518877	ATP1B4	Q9UN42	357 aa	Predicted RBP	7.45	□□□□□ -1.22
PCM1-208	ENST00000518877	CDC14C	A4D256	554 aa		7.44	□□□□□ -1.22
PCM1-208	ENST00000518877	SPINT1	O43278	529 aa		7.44	□□□□□ -1.22
PCM1-208	ENST00000518877	DHX9	Q08211	1270 aa	Known RBP	7.44	□□□□□ -1.22
PCM1-208	ENST00000518877	PDXDC2P	Q6P474	469 aa		7.44	□□□□□ -1.22
PCM1-208	ENST00000518877		Q6ZVU0	165 aa		7.44	□□□□□ -1.22
PCM1-208	ENST00000518877	TMEM151A	Q8N4L1	468 aa		7.44	□□□□□ -1.22
PCM1-208	ENST00000518877	SVOP	Q8N4V2	548 aa		7.44	□□□□□ -1.22
PCM1-208	ENST00000518877	SLC24A3	Q9HC58	644 aa		7.44	□□□□□ -1.22
PCM1-208	ENST00000518877	CDV3	Q9UKY7	258 aa	Known RBP	7.44	□□□□□ -1.22
PCM1-208	ENST00000518877	GDF11	O95390	407 aa		7.43	□□□□□ -1.22
PCM1-208	ENST00000518877	RELB	Q01201	579 aa		7.43	□□□□□ -1.22
PCM1-208	ENST00000518877	SUZ12	Q15022	739 aa	Known RBP	7.43	□□□□□ -1.22
PCM1-208	ENST00000518877	POLM	Q9NP87	494 aa	Predicted RBP	7.43	□□□□□ -1.22
PCM1-208	ENST00000518877	FKBPL	Q9UIM3	349 aa		7.43	□□□□□ -1.22
PCM1-208	ENST00000518877	ADAMTS8	Q9UP79	889 aa		7.43	□□□□□ -1.22
PCM1-208	ENST00000518877	RASSF7	Q02833	373 aa		7.42	□□□□□ -1.22
PCM1-208	ENST00000518877	LRRN4	Q8WUT4	740 aa		7.42	□□□□□ -1.22
PCM1-208	ENST00000518877	NANOS1	Q8WY41	292 aa	Known RBP	7.42	□□□□□ -1.22
PCM1-208	ENST00000518877	AGBL1	Q96MI9	1066 aa		7.42	□□□□□ -1.22
PCM1-208	ENST00000518877	LOC100996750	A0A140TA64	210 aa		7.41	□□□□□ -1.22
PCM1-208	ENST00000518877	SLC35F4	A4IF30	521 aa		7.41	□□□□□ -1.22
PCM1-208	ENST00000518877	GSK3A	P49840	483 aa		7.41	□□□□□ -1.22
PCM1-208	ENST00000518877	VWA5B2	Q8N398	1253 aa		7.41	□□□□□ -1.22
PCM1-208	ENST00000518877	KRTAP4-6	Q9BYQ5	205 aa		7.41	□□□□□ -1.22
PCM1-208	ENST00000518877	ITGA6	P23229	1130 aa		7.4	□□□□□ -1.22
PCM1-208	ENST00000518877	CTSO	P43234	321 aa	Predicted RBP	7.4	□□□□□ -1.22
PCM1-208	ENST00000518877	NR6A1	Q15406	480 aa		7.4	□□□□□ -1.22
PCM1-208	ENST00000518877	INTS6L	Q5JSJ4	861 aa	Known RBP	7.4	□□□□□ -1.22
PCM1-208	ENST00000518877	RNFT1	Q5M7Z0	435 aa		7.4	□□□□□ -1.22
PCM1-208	ENST00000518877	ZNF385C	Q66K41	422 aa	Predicted RBP	7.4	□□□□□ -1.22
PCM1-208	ENST00000518877	SV2A	Q7L0J3	742 aa		7.4	□□□□□ -1.22
PCM1-208	ENST00000518877	INSM2	Q96T92	566 aa	Predicted RBP	7.4	□□□□□ -1.22
PCM1-208	ENST00000518877	ZC3H4	Q9UPT8	1303 aa	Known RBP	7.39	□□□□□ -1.23
PCM1-208	ENST00000518877	RAB15	P59190	212 aa		7.39	□□□□□ -1.23
PCM1-208	ENST00000518877	PTK2	Q05397	1052 aa		7.39	□□□□□ -1.23
PCM1-208	ENST00000518877	ZNF395	Q9H8N7	513 aa	Predicted RBP	7.39	□□□□□ -1.23
PCM1-208	ENST00000518877	MARS	P56192	900 aa	Known RBP	7.37	□□□□□ -1.23
PCM1-208	ENST00000518877	NBPF20	Q3BBV1	942 aa		7.37	□□□□□ -1.23
PCM1-208	ENST00000518877	WHAMM	Q8TF30	809 aa		7.37	□□□□□ -1.23
PCM1-208	ENST00000518877	ADAM32	Q8TC27	787 aa		7.36	□□□□□ -1.23
PCM1-208	ENST00000518877	RNF217	Q8TC41	542 aa		7.36	□□□□□ -1.23
PCM1-208	ENST00000518877	TMPRSS4	Q9NRS4	437 aa		7.36	□□□□□ -1.23
PCM1-208	ENST00000518877	SLURP2	P0DP57	97 aa		7.35	□□□□□ -1.23
PCM1-208	ENST00000518877	IRS1	P35568	1242 aa		7.35	□□□□□ -1.23
PCM1-208	ENST00000518877	ZNF784	Q8NCA9	323 aa	Predicted RBP	7.35	□□□□□ -1.23
PCM1-208	ENST00000518877	PNMA1	Q8ND90	353 aa		7.35	□□□□□ -1.23
PCM1-208	ENST00000518877	AP1G2	O75843	785 aa		7.34	□□□□□ -1.23
PCM1-208	ENST00000518877	ADH1A	P07327	375 aa		7.34	□□□□□ -1.23
PCM1-208	ENST00000518877	SKIV2L	Q15477	1246 aa	Known RBP	7.34	□□□□□ -1.23
PCM1-208	ENST00000518877	DZIP3	Q86Y13	1208 aa	Known RBP	7.34	□□□□□ -1.23
PCM1-208	ENST00000518877	OCSTAMP	Q9BR26	566 aa		7.34	□□□□□ -1.23
PCM1-208	ENST00000518877	GPSM3	Q9Y4H4	160 aa		7.34	□□□□□ -1.23
PCM1-208	ENST00000518877	MAP3K10	Q02779	954 aa		7.33	□□□□□ -1.24
PCM1-208	ENST00000518877	GPAT2	Q6NUI2	795 aa		7.33	□□□□□ -1.24
PCM1-208	ENST00000518877	SENP3-EIF4A1	A0A087X0R7	540 aa		7.32	□□□□□ -1.24
PCM1-208	ENST00000518877	ADAMTS2	O95450	1211 aa		7.32	□□□□□ -1.24
PCM1-208	ENST00000518877	LYSMD3	Q7Z3D4	306 aa		7.32	□□□□□ -1.24
PCM1-208	ENST00000518877	PROCA1	Q8NCQ7	364 aa	Predicted RBP	7.32	□□□□□ -1.24
PCM1-208	ENST00000518877	SCARF2	Q96GP6	870 aa	Predicted RBP	7.32	□□□□□ -1.24
PCM1-208	ENST00000518877	ERVH48-1	M5A8F1	160 aa		7.31	□□□□□ -1.24
PCM1-208	ENST00000518877	ARHGEF15	O94989	841 aa		7.31	□□□□□ -1.24
PCM1-208	ENST00000518877	PTGIR	P43119	386 aa		7.31	□□□□□ -1.24
PCM1-208	ENST00000518877	SH3D19	Q5HYK7	790 aa		7.31	□□□□□ -1.24
PCM1-208	ENST00000518877	FOXD4L5	Q5VV16	416 aa	Predicted RBP	7.31	□□□□□ -1.24
PCM1-208	ENST00000518877	FBXO31	Q5XUX0	539 aa	Predicted RBP	7.31	□□□□□ -1.24
PCM1-208	ENST00000518877	KANK3	Q6NY19	840 aa		7.31	□□□□□ -1.24
PCM1-208	ENST00000518877	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	7.31	□□□□□ -1.24
PCM1-208	ENST00000518877	ADD1	P35611	737 aa	Known RBP	7.3	□□□□□ -1.24
PCM1-208	ENST00000518877	PPP2R2D	Q66LE6	453 aa		7.3	□□□□□ -1.24
PCM1-208	ENST00000518877	LYPD4	Q6UWN0	246 aa		7.3	□□□□□ -1.24
PCM1-208	ENST00000518877	PRICKLE2	Q7Z3G6	844 aa		7.3	□□□□□ -1.24
PCM1-208	ENST00000518877	EPS8L1	Q8TE68	723 aa		7.3	□□□□□ -1.24
PCM1-208	ENST00000518877	LILRA1	O75019	489 aa		7.29	□□□□□ -1.24
PCM1-208	ENST00000518877	SRSF11	Q05519	484 aa	Known RBP	7.29	□□□□□ -1.24
PCM1-208	ENST00000518877	TRIM52	Q96A61	297 aa		7.29	□□□□□ -1.24
PCM1-208	ENST00000518877	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	7.29	□□□□□ -1.24
PCM1-208	ENST00000518877	IGHA1	P01876	353 aa		7.28	□□□□□ -1.24
PCM1-208	ENST00000518877	USP17L8	P0C7I0	530 aa		7.28	□□□□□ -1.24
PCM1-208	ENST00000518877	RHOQ	P17081	205 aa		7.28	□□□□□ -1.24
PCM1-208	ENST00000518877	DDRGK1	Q96HY6	314 aa		7.28	□□□□□ -1.24
PCM1-208	ENST00000518877	HMX1	Q9NP08	348 aa	Predicted RBP	7.28	□□□□□ -1.24
PCM1-208	ENST00000518877	CYLD	Q9NQC7	956 aa		7.28	□□□□□ -1.24
PCM1-208	ENST00000518877	ENAM	Q9NRM1	1142 aa		7.28	□□□□□ -1.24
PCM1-208	ENST00000518877	CELA2B	P08218	269 aa	Predicted RBP	7.27	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms