RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 C11orf95C9JLR9 678 aaPredicted RBP18.59■□□□□ 0.57
VEGFA-219ENST00000518824 CARD14Q9BXL6 1004 aa18.59■□□□□ 0.57
VEGFA-219ENST00000518824 A0A0G2JS52 829 aa18.58■□□□□ 0.56
VEGFA-219ENST00000518824 MYT1Q01538 1121 aa18.58■□□□□ 0.56
VEGFA-219ENST00000518824 KCNH5Q8NCM2 988 aa18.58■□□□□ 0.56
VEGFA-219ENST00000518824 POLR3GLQ9BT43 218 aa18.58■□□□□ 0.56
VEGFA-219ENST00000518824 LTN1O94822 1766 aa18.58■□□□□ 0.56
VEGFA-219ENST00000518824 FAM182BQ5T319 152 aa18.57■□□□□ 0.56
VEGFA-219ENST00000518824 CDCA8Q53HL2 280 aa18.56■□□□□ 0.56
VEGFA-219ENST00000518824 FYB1O15117 783 aa18.54■□□□□ 0.56
VEGFA-219ENST00000518824 KRT27Q7Z3Y8 459 aa18.54■□□□□ 0.56
VEGFA-219ENST00000518824 GGNBP2Q9H3C7 697 aa18.54■□□□□ 0.56
VEGFA-219ENST00000518824 CRB1P82279 1406 aa18.53■□□□□ 0.56
VEGFA-219ENST00000518824 KIF20BQ96Q89 1820 aa18.53■□□□□ 0.56
VEGFA-219ENST00000518824 EP400Q96L91 3159 aa18.52■□□□□ 0.56
VEGFA-219ENST00000518824 NSD3Q9BZ95 1437 aa18.52■□□□□ 0.56
VEGFA-219ENST00000518824 TCP11L2Q8N4U5 519 aa18.52■□□□□ 0.56
VEGFA-219ENST00000518824 BARGINQ6ZT62 677 aa18.51■□□□□ 0.55
VEGFA-219ENST00000518824 COG3Q96JB2 828 aa18.51■□□□□ 0.55
VEGFA-219ENST00000518824 WDR17Q8IZU2 1322 aa18.5■□□□□ 0.55
VEGFA-219ENST00000518824 TOM1L2Q6ZVM7 507 aa18.5■□□□□ 0.55
VEGFA-219ENST00000518824 WNK3Q9BYP7 1800 aa18.49■□□□□ 0.55
VEGFA-219ENST00000518824 MAP3K19Q56UN5 1328 aa18.49■□□□□ 0.55
VEGFA-219ENST00000518824 ABCC6O95255 1503 aa18.48■□□□□ 0.55
VEGFA-219ENST00000518824 CSB-PGBD3P0DP91 1061 aa18.47■□□□□ 0.55
VEGFA-219ENST00000518824 RRS1Q15050 365 aaKnown RBP18.47■□□□□ 0.55
VEGFA-219ENST00000518824 PARP4Q9UKK3 1724 aaKnown RBP18.46■□□□□ 0.55
VEGFA-219ENST00000518824 THRAP3Q9Y2W1 955 aaKnown RBP18.46■□□□□ 0.55
VEGFA-219ENST00000518824 ERBB3P21860 1342 aa18.46■□□□□ 0.55
VEGFA-219ENST00000518824 LRRC37A3O60309 1634 aa18.45■□□□□ 0.54
VEGFA-219ENST00000518824 DEFB132Q7Z7B7 95 aa18.45■□□□□ 0.54
VEGFA-219ENST00000518824 ANKRD24Q8TF21 1146 aa18.45■□□□□ 0.54
VEGFA-219ENST00000518824 PANK3Q9H999 370 aa18.45■□□□□ 0.54
VEGFA-219ENST00000518824 PEAK1Q9H792 1746 aa18.44■□□□□ 0.54
VEGFA-219ENST00000518824 BLMP54132 1417 aaPredicted RBP18.44■□□□□ 0.54
VEGFA-219ENST00000518824 IP6K1Q92551 441 aa18.44■□□□□ 0.54
VEGFA-219ENST00000518824 LTV1Q96GA3 475 aaPredicted RBP18.44■□□□□ 0.54
VEGFA-219ENST00000518824 CARD10Q9BWT7 1032 aa18.44■□□□□ 0.54
VEGFA-219ENST00000518824 RGPD2P0DJD1 1756 aa18.44■□□□□ 0.54
VEGFA-219ENST00000518824 KIF7Q2M1P5 1343 aa18.44■□□□□ 0.54
VEGFA-219ENST00000518824 DISP2A7MBM2 1401 aa18.43■□□□□ 0.54
VEGFA-219ENST00000518824 HOXC9P31274 260 aa18.43■□□□□ 0.54
VEGFA-219ENST00000518824 PDE3BQ13370 1112 aa18.41■□□□□ 0.54
VEGFA-219ENST00000518824 NLRP2Q9NX02 1062 aa18.41■□□□□ 0.54
VEGFA-219ENST00000518824 TNS1Q9HBL0 1735 aaKnown RBP18.4■□□□□ 0.54
VEGFA-219ENST00000518824 AMPHP49418 695 aa18.4■□□□□ 0.54
VEGFA-219ENST00000518824 CCDC125Q86Z20 511 aa18.39■□□□□ 0.53
VEGFA-219ENST00000518824 EMILIN1Q9Y6C2 1016 aa18.39■□□□□ 0.53
VEGFA-219ENST00000518824 ANKRD26Q9UPS8 1709 aa18.38■□□□□ 0.53
VEGFA-219ENST00000518824 TRIM37O94972 964 aa18.38■□□□□ 0.53
VEGFA-219ENST00000518824 CGNL1Q0VF96 1302 aa18.38■□□□□ 0.53
VEGFA-219ENST00000518824 CCDC7Q96M83 1385 aa18.38■□□□□ 0.53
VEGFA-219ENST00000518824 RGPD1P0DJD0 1748 aa18.37■□□□□ 0.53
VEGFA-219ENST00000518824 DDB1Q16531 1140 aa18.37■□□□□ 0.53
VEGFA-219ENST00000518824 HSP90AB2PQ58FF8 381 aa18.37■□□□□ 0.53
VEGFA-219ENST00000518824 MARCH10Q8NA82 808 aaPredicted RBP18.37■□□□□ 0.53
VEGFA-219ENST00000518824 FAM208AQ9UK61 1670 aaKnown RBP18.37■□□□□ 0.53
VEGFA-219ENST00000518824 MAP2P11137 1827 aaKnown RBP18.37■□□□□ 0.53
VEGFA-219ENST00000518824 FAM196AQ6ZSG2 479 aa18.36■□□□□ 0.53
VEGFA-219ENST00000518824 PTF1AQ7RTS3 328 aa18.36■□□□□ 0.53
VEGFA-219ENST00000518824 RTL1A6NKG5 1358 aa18.35■□□□□ 0.53
VEGFA-219ENST00000518824 WASHC2AQ641Q2 1341 aa18.35■□□□□ 0.53
VEGFA-219ENST00000518824 TNNT2P45379 298 aaPredicted RBP18.35■□□□□ 0.53
VEGFA-219ENST00000518824 SBF2Q86WG5 1849 aa18.35■□□□□ 0.53
VEGFA-219ENST00000518824 EN1Q05925 392 aaPredicted RBP18.34■□□□□ 0.53
VEGFA-219ENST00000518824 USHBP1Q8N6Y0 703 aa18.34■□□□□ 0.53
VEGFA-219ENST00000518824 SF3B2Q13435 895 aaKnown RBP18.33■□□□□ 0.52
VEGFA-219ENST00000518824 NBPF6Q5VWK0 638 aa18.33■□□□□ 0.52
VEGFA-219ENST00000518824 NBPF4Q96M43 638 aa18.33■□□□□ 0.52
VEGFA-219ENST00000518824 PPM1GO15355 546 aaPredicted RBP18.32■□□□□ 0.52
VEGFA-219ENST00000518824 IL2RBP14784 551 aa18.32■□□□□ 0.52
VEGFA-219ENST00000518824 CDCA7Q9BWT1 371 aaPredicted RBP18.32■□□□□ 0.52
VEGFA-219ENST00000518824 POLKQ9UBT6 870 aa18.32■□□□□ 0.52
VEGFA-219ENST00000518824 OVOS2A0A0G2JMS6 1433 aa18.32■□□□□ 0.52
VEGFA-219ENST00000518824 TNS2Q63HR2 1409 aa18.32■□□□□ 0.52
VEGFA-219ENST00000518824 INSRP06213 1382 aa18.31■□□□□ 0.52
VEGFA-219ENST00000518824 FLT4P35916 1363 aa18.31■□□□□ 0.52
VEGFA-219ENST00000518824 EXOC5O00471 708 aa18.31■□□□□ 0.52
VEGFA-219ENST00000518824 MEGF6O75095 1541 aa18.3■□□□□ 0.52
VEGFA-219ENST00000518824 EZH2Q15910 746 aaKnown RBP18.3■□□□□ 0.52
VEGFA-219ENST00000518824 AMER1Q5JTC6 1135 aaPredicted RBP18.3■□□□□ 0.52
VEGFA-219ENST00000518824 PER1O15534 1290 aaPredicted RBP18.29■□□□□ 0.52
VEGFA-219ENST00000518824 APBA3O96018 575 aa18.29■□□□□ 0.52
VEGFA-219ENST00000518824 BAG6P46379 1132 aa18.29■□□□□ 0.52
VEGFA-219ENST00000518824 SHANK3Q9BYB0 1731 aa18.29■□□□□ 0.52
VEGFA-219ENST00000518824 KNSTRNQ9Y448 316 aa18.28■□□□□ 0.52
VEGFA-219ENST00000518824 KIF24Q5T7B8 1368 aa18.28■□□□□ 0.52
VEGFA-219ENST00000518824 CAMKK2Q96RR4 588 aa18.27■□□□□ 0.52
VEGFA-219ENST00000518824 KCNQ2O43526 872 aa18.26■□□□□ 0.51
VEGFA-219ENST00000518824 MORC1Q86VD1 984 aa18.26■□□□□ 0.51
VEGFA-219ENST00000518824 ACSBG1Q96GR2 724 aa18.25■□□□□ 0.51
VEGFA-219ENST00000518824 NSD2O96028 1365 aa18.25■□□□□ 0.51
VEGFA-219ENST00000518824 BCL9O00512 1426 aa18.24■□□□□ 0.51
VEGFA-219ENST00000518824 SMG6Q86US8 1419 aaKnown RBP18.24■□□□□ 0.51
VEGFA-219ENST00000518824 CNGB1Q14028 1251 aaPredicted RBP18.24■□□□□ 0.51
VEGFA-219ENST00000518824 DDX54Q8TDD1 881 aaKnown RBP18.24■□□□□ 0.51
VEGFA-219ENST00000518824 EIF4A2Q14240 407 aaKnown RBP18.23■□□□□ 0.51
VEGFA-219ENST00000518824 CC2D1BQ5T0F9 858 aaKnown RBP18.23■□□□□ 0.51
VEGFA-219ENST00000518824 RREB1Q92766 1687 aa18.22■□□□□ 0.51
VEGFA-219ENST00000518824 EYA1Q99502 592 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms