RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 AXIN1O15169 862 aa7.34□□□□□ -1.23
VPS13B-207ENST00000518569 HDGFL1Q5TGJ6 251 aa7.34□□□□□ -1.23
VPS13B-207ENST00000518569 DZIP3Q86Y13 1208 aaKnown RBP7.34□□□□□ -1.23
VPS13B-207ENST00000518569 EHBP1Q8NDI1 1231 aa7.34□□□□□ -1.23
VPS13B-207ENST00000518569 GLMNQ92990 594 aa7.34□□□□□ -1.23
VPS13B-207ENST00000518569 CALR3Q96L12 384 aaKnown RBP7.34□□□□□ -1.23
VPS13B-207ENST00000518569 CARD14Q9BXL6 1004 aa7.34□□□□□ -1.23
VPS13B-207ENST00000518569 TOR4AQ9NXH8 423 aa7.34□□□□□ -1.23
VPS13B-207ENST00000518569 MAP4K5Q9Y4K4 846 aa7.34□□□□□ -1.23
VPS13B-207ENST00000518569 SIAH2O43255 324 aa7.33□□□□□ -1.24
VPS13B-207ENST00000518569 ADAMTS19Q8TE59 1207 aa7.33□□□□□ -1.24
VPS13B-207ENST00000518569 SLC10A4Q96EP9 437 aa7.33□□□□□ -1.24
VPS13B-207ENST00000518569 PCDHB9Q9Y5E1 797 aa7.33□□□□□ -1.24
VPS13B-207ENST00000518569 ARID3CA6NKF2 412 aa7.32□□□□□ -1.24
VPS13B-207ENST00000518569 CCDC125Q86Z20 511 aa7.32□□□□□ -1.24
VPS13B-207ENST00000518569 CDK15Q96Q40 435 aa7.32□□□□□ -1.24
VPS13B-207ENST00000518569 C1orf115Q9H7X2 142 aa7.32□□□□□ -1.24
VPS13B-207ENST00000518569 CEP126Q9P2H0 1117 aa7.32□□□□□ -1.24
VPS13B-207ENST00000518569 SERPINA10Q9UK55 444 aa7.32□□□□□ -1.24
VPS13B-207ENST00000518569 NBPF20Q3BBV1 942 aa7.31□□□□□ -1.24
VPS13B-207ENST00000518569 MRGPRX2Q96LB1 330 aa7.31□□□□□ -1.24
VPS13B-207ENST00000518569 CTC1Q2NKJ3 1217 aa7.3□□□□□ -1.24
VPS13B-207ENST00000518569 SEPT12Q8IYM1 358 aa7.3□□□□□ -1.24
VPS13B-207ENST00000518569 NFATC2IPQ8NCF5 419 aa7.3□□□□□ -1.24
VPS13B-207ENST00000518569 SNIP1Q8TAD8 396 aaKnown RBP7.3□□□□□ -1.24
VPS13B-207ENST00000518569 DACH1Q9UI36 760 aa7.3□□□□□ -1.24
VPS13B-207ENST00000518569 ESPNB1AK53 854 aa7.29□□□□□ -1.24
VPS13B-207ENST00000518569 RNF20Q5VTR2 975 aa7.29□□□□□ -1.24
VPS13B-207ENST00000518569 CRIPAKQ8N1N5 446 aa7.29□□□□□ -1.24
VPS13B-207ENST00000518569 PHTF2Q8N3S3 785 aa7.29□□□□□ -1.24
VPS13B-207ENST00000518569 CCDC97Q96F63 343 aaPredicted RBP7.29□□□□□ -1.24
VPS13B-207ENST00000518569 GMPR2Q9P2T1 348 aaKnown RBP7.29□□□□□ -1.24
VPS13B-207ENST00000518569 C11orf95C9JLR9 678 aaPredicted RBP7.28□□□□□ -1.24
VPS13B-207ENST00000518569 AVPP01185 164 aa7.28□□□□□ -1.24
VPS13B-207ENST00000518569 SLFNL1Q499Z3 407 aa7.28□□□□□ -1.24
VPS13B-207ENST00000518569 VASH1Q7L8A9 365 aaPredicted RBP7.28□□□□□ -1.24
VPS13B-207ENST00000518569 KCTD15Q96SI1 283 aaPredicted RBP7.28□□□□□ -1.24
VPS13B-207ENST00000518569 GIGYF1O75420 1035 aaPredicted RBP7.27□□□□□ -1.25
VPS13B-207ENST00000518569 NR5A1Q13285 461 aa7.27□□□□□ -1.25
VPS13B-207ENST00000518569 CCDC82Q8N4S0 544 aa7.27□□□□□ -1.25
VPS13B-207ENST00000518569 UCN2Q96RP3 112 aa7.27□□□□□ -1.25
VPS13B-207ENST00000518569 CHIC2Q9UKJ5 165 aa7.27□□□□□ -1.25
VPS13B-207ENST00000518569 J3QL48 77 aa7.26□□□□□ -1.25
VPS13B-207ENST00000518569 LZTS3O60299 673 aaPredicted RBP7.26□□□□□ -1.25
VPS13B-207ENST00000518569 ADH1CP00326 375 aa7.26□□□□□ -1.25
VPS13B-207ENST00000518569 SMPD1P17405 629 aa7.26□□□□□ -1.25
VPS13B-207ENST00000518569 GRM5P41594 1212 aa7.26□□□□□ -1.25
VPS13B-207ENST00000518569 MAP7D1Q3KQU3 841 aa7.26□□□□□ -1.25
VPS13B-207ENST00000518569 RNF135Q8IUD6 432 aa7.26□□□□□ -1.25
VPS13B-207ENST00000518569 TRIM52Q96A61 297 aa7.26□□□□□ -1.25
VPS13B-207ENST00000518569 PPP1R12CQ9BZL4 782 aa7.26□□□□□ -1.25
VPS13B-207ENST00000518569 TLL2Q9Y6L7 1015 aa7.26□□□□□ -1.25
VPS13B-207ENST00000518569 DHX9Q08211 1270 aaKnown RBP7.25□□□□□ -1.25
VPS13B-207ENST00000518569 ARID5BQ14865 1188 aa7.25□□□□□ -1.25
VPS13B-207ENST00000518569 ATP9BO43861 1147 aa7.24□□□□□ -1.25
VPS13B-207ENST00000518569 SMCPP49901 116 aaPredicted RBP7.24□□□□□ -1.25
VPS13B-207ENST00000518569 INTS6LQ5JSJ4 861 aaKnown RBP7.24□□□□□ -1.25
VPS13B-207ENST00000518569 PALM3A6NDB9 673 aaPredicted RBP7.23□□□□□ -1.25
VPS13B-207ENST00000518569 PIK3CDO00329 1044 aa7.23□□□□□ -1.25
VPS13B-207ENST00000518569 ALDH1A1P00352 501 aa7.23□□□□□ -1.25
VPS13B-207ENST00000518569 SKIP12755 728 aa7.23□□□□□ -1.25
VPS13B-207ENST00000518569 TBC1D9Q6ZT07 1266 aa7.23□□□□□ -1.25
VPS13B-207ENST00000518569 PLEKHM2Q8IWE5 1019 aa7.23□□□□□ -1.25
VPS13B-207ENST00000518569 ATP13A2Q9NQ11 1180 aa7.23□□□□□ -1.25
VPS13B-207ENST00000518569 TFIP11Q9UBB9 837 aaKnown RBP7.23□□□□□ -1.25
VPS13B-207ENST00000518569 FSHRP23945 695 aa7.22□□□□□ -1.25
VPS13B-207ENST00000518569 CFAP70Q5T0N1 1121 aa7.22□□□□□ -1.25
VPS13B-207ENST00000518569 TREML4Q6UXN2 200 aa7.22□□□□□ -1.25
VPS13B-207ENST00000518569 PLPP7Q8NBV4 271 aa7.22□□□□□ -1.25
VPS13B-207ENST00000518569 HPS1Q92902 700 aa7.22□□□□□ -1.25
VPS13B-207ENST00000518569 MAFBQ9Y5Q3 323 aaPredicted RBP7.22□□□□□ -1.25
VPS13B-207ENST00000518569 WASF2Q9Y6W5 498 aa7.22□□□□□ -1.25
VPS13B-207ENST00000518569 CCDC116Q8IYX3 515 aa7.21□□□□□ -1.26
VPS13B-207ENST00000518569 CCDC85AQ96PX6 553 aaPredicted RBP7.21□□□□□ -1.26
VPS13B-207ENST00000518569 DOLKQ9UPQ8 538 aa7.21□□□□□ -1.26
VPS13B-207ENST00000518569 USP17L5A8MUK1 530 aa7.2□□□□□ -1.26
VPS13B-207ENST00000518569 ERVH48-1M5A8F1 160 aa7.2□□□□□ -1.26
VPS13B-207ENST00000518569 WFS1O76024 890 aa7.2□□□□□ -1.26
VPS13B-207ENST00000518569 SIRT1Q96EB6 747 aa7.2□□□□□ -1.26
VPS13B-207ENST00000518569 SENP2Q9HC62 589 aa7.2□□□□□ -1.26
VPS13B-207ENST00000518569 EMILIN1Q9Y6C2 1016 aa7.2□□□□□ -1.26
VPS13B-207ENST00000518569 USP17L3A6NCW0 530 aa7.19□□□□□ -1.26
VPS13B-207ENST00000518569 USP17L4A6NCW7 530 aa7.19□□□□□ -1.26
VPS13B-207ENST00000518569 LMOD1P29536 600 aaPredicted RBP7.19□□□□□ -1.26
VPS13B-207ENST00000518569 NNTQ13423 1086 aa7.19□□□□□ -1.26
VPS13B-207ENST00000518569 EML3Q32P44 896 aa7.19□□□□□ -1.26
VPS13B-207ENST00000518569 TSGA10IPQ3SY00 556 aa7.19□□□□□ -1.26
VPS13B-207ENST00000518569 PPP1R26Q5T8A7 1209 aaPredicted RBP7.19□□□□□ -1.26
VPS13B-207ENST00000518569 USP17L2Q6R6M4 530 aa7.19□□□□□ -1.26
VPS13B-207ENST00000518569 USP17L1Q7RTZ2 530 aa7.19□□□□□ -1.26
VPS13B-207ENST00000518569 PGPEP1Q9NXJ5 209 aa7.19□□□□□ -1.26
VPS13B-207ENST00000518569 PCDHB11Q9Y5F2 797 aa7.19□□□□□ -1.26
VPS13B-207ENST00000518569 PPP1R15AO75807 674 aaPredicted RBP7.18□□□□□ -1.26
VPS13B-207ENST00000518569 NR3C2P08235 984 aa7.18□□□□□ -1.26
VPS13B-207ENST00000518569 SNRPBP14678 240 aaKnown RBP7.18□□□□□ -1.26
VPS13B-207ENST00000518569 USP4Q13107 963 aa7.18□□□□□ -1.26
VPS13B-207ENST00000518569 ARID3AQ99856 593 aa7.18□□□□□ -1.26
VPS13B-207ENST00000518569 RAB15P59190 212 aa7.17□□□□□ -1.26
VPS13B-207ENST00000518569 ERVK-9P63128 1117 aa7.17□□□□□ -1.26
VPS13B-207ENST00000518569 SRPK2P78362 688 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms