RNA–Protein interactions for RNA: ENST00000518407.1

IGHV3-6-201, Transcript of immunoglobulin heavy variable 3-6 (pseudogene), humanhuman

BASIC

Gene IGHV3-6, Length 347 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-6-201ENST00000518407 ATRNO75882 1429 aa17.17■□□□□ 0.34
IGHV3-6-201ENST00000518407 NGLY1Q96IV0 654 aa17.17■□□□□ 0.34
IGHV3-6-201ENST00000518407 BLMP54132 1417 aaPredicted RBP17.16■□□□□ 0.34
IGHV3-6-201ENST00000518407 CC2D1BQ5T0F9 858 aaKnown RBP17.16■□□□□ 0.34
IGHV3-6-201ENST00000518407 KIF24Q5T7B8 1368 aa17.15■□□□□ 0.34
IGHV3-6-201ENST00000518407 RRS1Q15050 365 aaKnown RBP17.15■□□□□ 0.34
IGHV3-6-201ENST00000518407 CDK12Q9NYV4 1490 aaPredicted RBP17.15■□□□□ 0.34
IGHV3-6-201ENST00000518407 PARD3Q8TEW0 1356 aa17.15■□□□□ 0.34
IGHV3-6-201ENST00000518407 MORC1Q86VD1 984 aa17.14■□□□□ 0.33
IGHV3-6-201ENST00000518407 BTG4Q9NY30 223 aa17.14■□□□□ 0.33
IGHV3-6-201ENST00000518407 AXIN2Q9Y2T1 843 aa17.14■□□□□ 0.33
IGHV3-6-201ENST00000518407 RGPD1P0DJD0 1748 aa17.13■□□□□ 0.33
IGHV3-6-201ENST00000518407 UNC5CLQ8IV45 518 aa17.13■□□□□ 0.33
IGHV3-6-201ENST00000518407 USP21Q9UK80 565 aa17.13■□□□□ 0.33
IGHV3-6-201ENST00000518407 EMILIN1Q9Y6C2 1016 aa17.13■□□□□ 0.33
IGHV3-6-201ENST00000518407 FLT4P35916 1363 aa17.13■□□□□ 0.33
IGHV3-6-201ENST00000518407 ZBTB7CA1YPR0 619 aa17.12■□□□□ 0.33
IGHV3-6-201ENST00000518407 HOXC9P31274 260 aa17.12■□□□□ 0.33
IGHV3-6-201ENST00000518407 IP6K1Q92551 441 aa17.12■□□□□ 0.33
IGHV3-6-201ENST00000518407 POLKQ9UBT6 870 aa17.12■□□□□ 0.33
IGHV3-6-201ENST00000518407 THSD7AQ9UPZ6 1657 aa17.12■□□□□ 0.33
IGHV3-6-201ENST00000518407 TNNT2P45379 298 aaPredicted RBP17.11■□□□□ 0.33
IGHV3-6-201ENST00000518407 ZNF772Q68DY9 489 aaPredicted RBP17.11■□□□□ 0.33
IGHV3-6-201ENST00000518407 PHF23Q9BUL5 403 aaPredicted RBP17.11■□□□□ 0.33
IGHV3-6-201ENST00000518407 BRWD3Q6RI45 1802 aa17.11■□□□□ 0.33
IGHV3-6-201ENST00000518407 COL3A1P02461 1466 aaPredicted RBP17.11■□□□□ 0.33
IGHV3-6-201ENST00000518407 INSRP06213 1382 aa17.1■□□□□ 0.33
IGHV3-6-201ENST00000518407 PARP4Q9UKK3 1724 aaKnown RBP17.1■□□□□ 0.33
IGHV3-6-201ENST00000518407 POTEAQ6S8J7 498 aa17.09■□□□□ 0.33
IGHV3-6-201ENST00000518407 ERBB3P21860 1342 aa17.09■□□□□ 0.33
IGHV3-6-201ENST00000518407 CRB1P82279 1406 aa17.08■□□□□ 0.32
IGHV3-6-201ENST00000518407 WDR17Q8IZU2 1322 aa17.08■□□□□ 0.32
IGHV3-6-201ENST00000518407 AMPHP49418 695 aa17.08■□□□□ 0.32
IGHV3-6-201ENST00000518407 VPS72Q15906 364 aa17.08■□□□□ 0.32
IGHV3-6-201ENST00000518407 CNGB1Q14028 1251 aaPredicted RBP17.07■□□□□ 0.32
IGHV3-6-201ENST00000518407 TRPC5Q9UL62 973 aaPredicted RBP17.07■□□□□ 0.32
IGHV3-6-201ENST00000518407 SHANK3Q9BYB0 1731 aa17.07■□□□□ 0.32
IGHV3-6-201ENST00000518407 LRRC37A3O60309 1634 aa17.07■□□□□ 0.32
IGHV3-6-201ENST00000518407 NCAPD2Q15021 1401 aa17.06■□□□□ 0.32
IGHV3-6-201ENST00000518407 SPATA31A5Q5VU36 1347 aa17.06■□□□□ 0.32
IGHV3-6-201ENST00000518407 SPATA31A7Q8IWB4 1347 aa17.06■□□□□ 0.32
IGHV3-6-201ENST00000518407 HSP90AB2PQ58FF8 381 aa17.06■□□□□ 0.32
IGHV3-6-201ENST00000518407 LARP1Q6PKG0 1096 aaKnown RBP17.06■□□□□ 0.32
IGHV3-6-201ENST00000518407 STRN4Q9NRL3 753 aa17.06■□□□□ 0.32
IGHV3-6-201ENST00000518407 ANKRD24Q8TF21 1146 aa17.05■□□□□ 0.32
IGHV3-6-201ENST00000518407 QTRT2Q9H974 415 aaKnown RBP17.05■□□□□ 0.32
IGHV3-6-201ENST00000518407 SPATA31A1Q5TZJ5 1347 aa17.04■□□□□ 0.32
IGHV3-6-201ENST00000518407 PPP2R1AP30153 589 aa17.04■□□□□ 0.32
IGHV3-6-201ENST00000518407 MTHFSP49914 203 aa17.03■□□□□ 0.32
IGHV3-6-201ENST00000518407 RALBP1Q15311 655 aa17.03■□□□□ 0.32
IGHV3-6-201ENST00000518407 GJD4Q96KN9 370 aaPredicted RBP17.03■□□□□ 0.32
IGHV3-6-201ENST00000518407 PKD1L3Q7Z443 1732 aa17.03■□□□□ 0.32
IGHV3-6-201ENST00000518407 DISP2A7MBM2 1401 aa17.03■□□□□ 0.32
IGHV3-6-201ENST00000518407 PPM1GO15355 546 aaPredicted RBP17.02■□□□□ 0.32
IGHV3-6-201ENST00000518407 EVA1CP58658 441 aa17.02■□□□□ 0.32
IGHV3-6-201ENST00000518407 PRKRIP1Q9H875 184 aaPredicted RBP17.02■□□□□ 0.32
IGHV3-6-201ENST00000518407 RGS12O14924 1447 aa17.02■□□□□ 0.31
IGHV3-6-201ENST00000518407 RBM6P78332 1123 aaKnown RBP17.01■□□□□ 0.31
IGHV3-6-201ENST00000518407 EIF4A2Q14240 407 aaKnown RBP17■□□□□ 0.31
IGHV3-6-201ENST00000518407 LTV1Q96GA3 475 aaPredicted RBP17■□□□□ 0.31
IGHV3-6-201ENST00000518407 CARD10Q9BWT7 1032 aa17■□□□□ 0.31
IGHV3-6-201ENST00000518407 VIRMAQ69YN4 1812 aaKnown RBP16.99■□□□□ 0.31
IGHV3-6-201ENST00000518407 TOM1L2Q6ZVM7 507 aa16.99■□□□□ 0.31
IGHV3-6-201ENST00000518407 MYBBP1AQ9BQG0 1328 aaKnown RBP16.98■□□□□ 0.31
IGHV3-6-201ENST00000518407 CSB-PGBD3P0DP91 1061 aa16.98■□□□□ 0.31
IGHV3-6-201ENST00000518407 RXRBP28702 533 aa16.98■□□□□ 0.31
IGHV3-6-201ENST00000518407 BARGINQ6ZT62 677 aa16.98■□□□□ 0.31
IGHV3-6-201ENST00000518407 THRAP3Q9Y2W1 955 aaKnown RBP16.98■□□□□ 0.31
IGHV3-6-201ENST00000518407 CCDC9Q9Y3X0 531 aaKnown RBP16.98■□□□□ 0.31
IGHV3-6-201ENST00000518407 MEGF6O75095 1541 aa16.97■□□□□ 0.31
IGHV3-6-201ENST00000518407 ONECUT3O60422 494 aaPredicted RBP16.97■□□□□ 0.31
IGHV3-6-201ENST00000518407 NBPF6Q5VWK0 638 aa16.97■□□□□ 0.31
IGHV3-6-201ENST00000518407 TCP11L2Q8N4U5 519 aa16.97■□□□□ 0.31
IGHV3-6-201ENST00000518407 NBPF4Q96M43 638 aa16.97■□□□□ 0.31
IGHV3-6-201ENST00000518407 IGSF1Q8N6C5 1336 aa16.96■□□□□ 0.31
IGHV3-6-201ENST00000518407 SBF2Q86WG5 1849 aa16.96■□□□□ 0.31
IGHV3-6-201ENST00000518407 IL13P35225 146 aa16.96■□□□□ 0.31
IGHV3-6-201ENST00000518407 NLRP2Q9NX02 1062 aa16.96■□□□□ 0.31
IGHV3-6-201ENST00000518407 USP35Q9P2H5 1018 aa16.96■□□□□ 0.31
IGHV3-6-201ENST00000518407 FAM98CQ17RN3 349 aaKnown RBP16.95■□□□□ 0.3
IGHV3-6-201ENST00000518407 EYA1Q99502 592 aa16.95■□□□□ 0.3
IGHV3-6-201ENST00000518407 KDRP35968 1356 aa16.94■□□□□ 0.3
IGHV3-6-201ENST00000518407 TNS2Q63HR2 1409 aa16.94■□□□□ 0.3
IGHV3-6-201ENST00000518407 EP400Q96L91 3159 aa16.93■□□□□ 0.3
IGHV3-6-201ENST00000518407 USHBP1Q8N6Y0 703 aa16.93■□□□□ 0.3
IGHV3-6-201ENST00000518407 OVOS2A0A0G2JMS6 1433 aa16.93■□□□□ 0.3
IGHV3-6-201ENST00000518407 DIAPH1O60610 1272 aaKnown RBP16.92■□□□□ 0.3
IGHV3-6-201ENST00000518407 ANP32CO43423 234 aa16.91■□□□□ 0.3
IGHV3-6-201ENST00000518407 CFAP53Q96M91 514 aa16.91■□□□□ 0.3
IGHV3-6-201ENST00000518407 PLEKHG2Q9H7P9 1386 aa16.9■□□□□ 0.3
IGHV3-6-201ENST00000518407 DLG5Q8TDM6 1919 aa16.9■□□□□ 0.3
IGHV3-6-201ENST00000518407 SEPT12Q8IYM1 358 aa16.9■□□□□ 0.3
IGHV3-6-201ENST00000518407 CDCA7Q9BWT1 371 aaPredicted RBP16.9■□□□□ 0.3
IGHV3-6-201ENST00000518407 IL2RBP14784 551 aa16.89■□□□□ 0.29
IGHV3-6-201ENST00000518407 ILDR2Q71H61 639 aa16.89■□□□□ 0.29
IGHV3-6-201ENST00000518407 DOT1LQ8TEK3 1739 aa16.89■□□□□ 0.29
IGHV3-6-201ENST00000518407 TOGARAM1Q9Y4F4 1720 aa16.89■□□□□ 0.29
IGHV3-6-201ENST00000518407 AEBP1Q8IUX7 1158 aa16.88■□□□□ 0.29
IGHV3-6-201ENST00000518407 TNS1Q9HBL0 1735 aaKnown RBP16.87■□□□□ 0.29
IGHV3-6-201ENST00000518407 SCN11AQ9UI33 1791 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms