RNA–Protein interactions for RNA: ENST00000517957.1

PDGFRB-204, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 4

Gene PDGFRB, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-204ENST00000517957 AXIN2Q9Y2T1 843 aa17.54■□□□□ 0.4
PDGFRB-204ENST00000517957 COL5A2P05997 1499 aaPredicted RBP17.54■□□□□ 0.4
PDGFRB-204ENST00000517957 CSB-PGBD3P0DP91 1061 aa17.53■□□□□ 0.4
PDGFRB-204ENST00000517957 FAM182BQ5T319 152 aa17.53■□□□□ 0.4
PDGFRB-204ENST00000517957 FAM196AQ6ZSG2 479 aa17.52■□□□□ 0.4
PDGFRB-204ENST00000517957 CRB1P82279 1406 aa17.52■□□□□ 0.4
PDGFRB-204ENST00000517957 DEFB132Q7Z7B7 95 aa17.51■□□□□ 0.39
PDGFRB-204ENST00000517957 THSD7AQ9UPZ6 1657 aa17.51■□□□□ 0.39
PDGFRB-204ENST00000517957 WDR17Q8IZU2 1322 aa17.5■□□□□ 0.39
PDGFRB-204ENST00000517957 BAG6P46379 1132 aa17.5■□□□□ 0.39
PDGFRB-204ENST00000517957 COL18A1P39060 1754 aa17.49■□□□□ 0.39
PDGFRB-204ENST00000517957 COG3Q96JB2 828 aa17.49■□□□□ 0.39
PDGFRB-204ENST00000517957 ANKRD36BQ8N2N9 1353 aa17.49■□□□□ 0.39
PDGFRB-204ENST00000517957 NFAT5O94916 1531 aa17.47■□□□□ 0.39
PDGFRB-204ENST00000517957 CDCA7Q9BWT1 371 aaPredicted RBP17.47■□□□□ 0.39
PDGFRB-204ENST00000517957 CARD10Q9BWT7 1032 aa17.47■□□□□ 0.39
PDGFRB-204ENST00000517957 RGPD5Q99666 1765 aa17.46■□□□□ 0.39
PDGFRB-204ENST00000517957 C11orf95C9JLR9 678 aaPredicted RBP17.46■□□□□ 0.39
PDGFRB-204ENST00000517957 EIF4G2P78344 907 aaKnown RBP eCLIP17.46■□□□□ 0.39
PDGFRB-204ENST00000517957 DDB1Q16531 1140 aa17.46■□□□□ 0.39
PDGFRB-204ENST00000517957 TRIM37O94972 964 aa17.45■□□□□ 0.38
PDGFRB-204ENST00000517957 POLR3GLQ9BT43 218 aa17.44■□□□□ 0.38
PDGFRB-204ENST00000517957 USP54Q70EL1 1684 aa17.44■□□□□ 0.38
PDGFRB-204ENST00000517957 EN1Q05925 392 aaPredicted RBP17.43■□□□□ 0.38
PDGFRB-204ENST00000517957 NLRP2Q9NX02 1062 aa17.43■□□□□ 0.38
PDGFRB-204ENST00000517957 OVOS2A0A0J9YW53 1432 aa17.43■□□□□ 0.38
PDGFRB-204ENST00000517957 OVOS2Q6IE36 1432 aa17.43■□□□□ 0.38
PDGFRB-204ENST00000517957 ABCC6O95255 1503 aa17.42■□□□□ 0.38
PDGFRB-204ENST00000517957 CCDC7Q96M83 1385 aa17.42■□□□□ 0.38
PDGFRB-204ENST00000517957 EXOC5O00471 708 aa17.42■□□□□ 0.38
PDGFRB-204ENST00000517957 FYB1O15117 783 aa17.42■□□□□ 0.38
PDGFRB-204ENST00000517957 ANKRD24Q8TF21 1146 aa17.42■□□□□ 0.38
PDGFRB-204ENST00000517957 IP6K1Q92551 441 aa17.42■□□□□ 0.38
PDGFRB-204ENST00000517957 GGNBP2Q9H3C7 697 aa17.42■□□□□ 0.38
PDGFRB-204ENST00000517957 RGPD1P0DJD0 1748 aa17.41■□□□□ 0.38
PDGFRB-204ENST00000517957 LTN1O94822 1766 aa17.41■□□□□ 0.38
PDGFRB-204ENST00000517957 APBA3O96018 575 aa17.41■□□□□ 0.38
PDGFRB-204ENST00000517957 AMPHP49418 695 aa17.41■□□□□ 0.38
PDGFRB-204ENST00000517957 ERBB3P21860 1342 aa17.41■□□□□ 0.38
PDGFRB-204ENST00000517957 PARP4Q9UKK3 1724 aaKnown RBP17.41■□□□□ 0.38
PDGFRB-204ENST00000517957 HSPA5P11021 654 aaKnown RBP17.4■□□□□ 0.38
PDGFRB-204ENST00000517957 LTV1Q96GA3 475 aaPredicted RBP17.39■□□□□ 0.37
PDGFRB-204ENST00000517957 FBLN1P23142 703 aa17.38■□□□□ 0.37
PDGFRB-204ENST00000517957 CARD14Q9BXL6 1004 aa17.38■□□□□ 0.37
PDGFRB-204ENST00000517957 MAP3K19Q56UN5 1328 aa17.38■□□□□ 0.37
PDGFRB-204ENST00000517957 EZH2Q15910 746 aaKnown RBP17.37■□□□□ 0.37
PDGFRB-204ENST00000517957 OVOS2A0A0G2JMS6 1433 aa17.37■□□□□ 0.37
PDGFRB-204ENST00000517957 IL2RBP14784 551 aa17.36■□□□□ 0.37
PDGFRB-204ENST00000517957 HOXC9P31274 260 aa17.36■□□□□ 0.37
PDGFRB-204ENST00000517957 MARCH10Q8NA82 808 aaPredicted RBP17.36■□□□□ 0.37
PDGFRB-204ENST00000517957 RRS1Q15050 365 aaKnown RBP17.35■□□□□ 0.37
PDGFRB-204ENST00000517957 CAMKK2Q96RR4 588 aa17.35■□□□□ 0.37
PDGFRB-204ENST00000517957 DISP2A7MBM2 1401 aa17.35■□□□□ 0.37
PDGFRB-204ENST00000517957 NSD3Q9BZ95 1437 aa17.34■□□□□ 0.37
PDGFRB-204ENST00000517957 TNS1Q9HBL0 1735 aaKnown RBP17.33■□□□□ 0.37
PDGFRB-204ENST00000517957 LRRC37A3O60309 1634 aa17.33■□□□□ 0.37
PDGFRB-204ENST00000517957 CGNL1Q0VF96 1302 aa17.33■□□□□ 0.36
PDGFRB-204ENST00000517957 WNK3Q9BYP7 1800 aa17.33■□□□□ 0.36
PDGFRB-204ENST00000517957 PARD3Q8TEW0 1356 aa17.32■□□□□ 0.36
PDGFRB-204ENST00000517957 BCL11BQ9C0K0 894 aaPredicted RBP17.32■□□□□ 0.36
PDGFRB-204ENST00000517957 KIF20BQ96Q89 1820 aa17.31■□□□□ 0.36
PDGFRB-204ENST00000517957 MYOM1P52179 1685 aa17.31■□□□□ 0.36
PDGFRB-204ENST00000517957 RTL1A6NKG5 1358 aa17.3■□□□□ 0.36
PDGFRB-204ENST00000517957 PSDA5PKW4 1024 aaPredicted RBP17.3■□□□□ 0.36
PDGFRB-204ENST00000517957 NBPF14Q5TI25 921 aa17.3■□□□□ 0.36
PDGFRB-204ENST00000517957 KAT6BQ8WYB5 2073 aa17.29■□□□□ 0.36
PDGFRB-204ENST00000517957 PANK3Q9H999 370 aa17.29■□□□□ 0.36
PDGFRB-204ENST00000517957 PEAK1Q9H792 1746 aa17.29■□□□□ 0.36
PDGFRB-204ENST00000517957 BCL9O00512 1426 aa17.29■□□□□ 0.36
PDGFRB-204ENST00000517957 TNS2Q63HR2 1409 aa17.29■□□□□ 0.36
PDGFRB-204ENST00000517957 PLSCR1O15162 318 aa17.28■□□□□ 0.36
PDGFRB-204ENST00000517957 PPM1GO15355 546 aaPredicted RBP17.28■□□□□ 0.36
PDGFRB-204ENST00000517957 R3HDM1Q15032 1099 aaKnown RBP17.28■□□□□ 0.36
PDGFRB-204ENST00000517957 SMG6Q86US8 1419 aaKnown RBP17.28■□□□□ 0.36
PDGFRB-204ENST00000517957 SBF2Q86WG5 1849 aa17.28■□□□□ 0.36
PDGFRB-204ENST00000517957 FAM208AQ9UK61 1670 aaKnown RBP17.27■□□□□ 0.36
PDGFRB-204ENST00000517957 HSP90AB2PQ58FF8 381 aa17.27■□□□□ 0.36
PDGFRB-204ENST00000517957 DDX54Q8TDD1 881 aaKnown RBP17.27■□□□□ 0.36
PDGFRB-204ENST00000517957 KIF24Q5T7B8 1368 aa17.27■□□□□ 0.35
PDGFRB-204ENST00000517957 NBPF6Q5VWK0 638 aa17.26■□□□□ 0.35
PDGFRB-204ENST00000517957 NBPF4Q96M43 638 aa17.26■□□□□ 0.35
PDGFRB-204ENST00000517957 INSRP06213 1382 aa17.26■□□□□ 0.35
PDGFRB-204ENST00000517957 FLT4P35916 1363 aa17.26■□□□□ 0.35
PDGFRB-204ENST00000517957 SRCAPQ6ZRS2 3230 aa17.25■□□□□ 0.35
PDGFRB-204ENST00000517957 PTF1AQ7RTS3 328 aa17.25■□□□□ 0.35
PDGFRB-204ENST00000517957 ACSBG1Q96GR2 724 aa17.25■□□□□ 0.35
PDGFRB-204ENST00000517957 EMILIN1Q9Y6C2 1016 aa17.25■□□□□ 0.35
PDGFRB-204ENST00000517957 ZCRB1Q8TBF4 217 aaKnown RBP17.24■□□□□ 0.35
PDGFRB-204ENST00000517957 RAPGEF4Q8WZA2 1011 aa17.24■□□□□ 0.35
PDGFRB-204ENST00000517957 KCNQ2O43526 872 aa17.23■□□□□ 0.35
PDGFRB-204ENST00000517957 TNNT2P45379 298 aaPredicted RBP17.23■□□□□ 0.35
PDGFRB-204ENST00000517957 USHBP1Q8N6Y0 703 aa17.23■□□□□ 0.35
PDGFRB-204ENST00000517957 KNSTRNQ9Y448 316 aa17.22■□□□□ 0.35
PDGFRB-204ENST00000517957 RGPD2P0DJD1 1756 aa17.22■□□□□ 0.35
PDGFRB-204ENST00000517957 TATP17735 454 aaPredicted RBP17.21■□□□□ 0.35
PDGFRB-204ENST00000517957 POLKQ9UBT6 870 aa17.21■□□□□ 0.35
PDGFRB-204ENST00000517957 MAP2P11137 1827 aaKnown RBP17.21■□□□□ 0.35
PDGFRB-204ENST00000517957 WASHC2AQ641Q2 1341 aa17.21■□□□□ 0.34
PDGFRB-204ENST00000517957 TXNRD1Q16881 649 aa17.19■□□□□ 0.34
PDGFRB-204ENST00000517957 MORC1Q86VD1 984 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms