RNA–Protein interactions for RNA: ENST00000517801.5

FAM49B-204, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-204ENST00000517801 KCTD15Q96SI1 283 aaPredicted RBP10.04□□□□□ -0.8
FAM49B-204ENST00000517801 TNFRSF10AO00220 468 aa10.03□□□□□ -0.8
FAM49B-204ENST00000517801 SLFNL1Q499Z3 407 aa10.03□□□□□ -0.8
FAM49B-204ENST00000517801 ESPNB1AK53 854 aa10.02□□□□□ -0.81
FAM49B-204ENST00000517801 GIGYF1O75420 1035 aaPredicted RBP10.02□□□□□ -0.81
FAM49B-204ENST00000517801 PRR20EP86478 221 aa10.02□□□□□ -0.81
FAM49B-204ENST00000517801 PRR20CP86479 221 aa10.02□□□□□ -0.81
FAM49B-204ENST00000517801 PRR20DP86480 221 aa10.02□□□□□ -0.81
FAM49B-204ENST00000517801 PRR20BP86481 221 aa10.02□□□□□ -0.81
FAM49B-204ENST00000517801 PRR20AP86496 221 aa10.02□□□□□ -0.81
FAM49B-204ENST00000517801 SNIP1Q8TAD8 396 aaKnown RBP10.02□□□□□ -0.81
FAM49B-204ENST00000517801 UCN2Q96RP3 112 aa10.02□□□□□ -0.81
FAM49B-204ENST00000517801 ADH1CP00326 375 aa10.01□□□□□ -0.81
FAM49B-204ENST00000517801 ALDH1A1P00352 501 aa10.01□□□□□ -0.81
FAM49B-204ENST00000517801 RNF20Q5VTR2 975 aa10.01□□□□□ -0.81
FAM49B-204ENST00000517801 TRIM67Q6ZTA4 783 aa10.01□□□□□ -0.81
FAM49B-204ENST00000517801 RNF135Q8IUD6 432 aa10.01□□□□□ -0.81
FAM49B-204ENST00000517801 SEPT12Q8IYM1 358 aa10.01□□□□□ -0.81
FAM49B-204ENST00000517801 CYP4X1Q8N118 509 aa10.01□□□□□ -0.81
FAM49B-204ENST00000517801 TTC24A2A3L6 582 aaPredicted RBP10□□□□□ -0.81
FAM49B-204ENST00000517801 PIK3CDO00329 1044 aa10□□□□□ -0.81
FAM49B-204ENST00000517801 FSHRP23945 695 aa10□□□□□ -0.81
FAM49B-204ENST00000517801 GRM5P41594 1212 aa10□□□□□ -0.81
FAM49B-204ENST00000517801 PHTF2Q8N3S3 785 aa10□□□□□ -0.81
FAM49B-204ENST00000517801 INTS6LQ5JSJ4 861 aaKnown RBP9.99□□□□□ -0.81
FAM49B-204ENST00000517801 CCDC125Q86Z20 511 aa9.99□□□□□ -0.81
FAM49B-204ENST00000517801 NFATC2IPQ8NCF5 419 aa9.99□□□□□ -0.81
FAM49B-204ENST00000517801 PPP1R12CQ9BZL4 782 aa9.99□□□□□ -0.81
FAM49B-204ENST00000517801 TOR4AQ9NXH8 423 aa9.99□□□□□ -0.81
FAM49B-204ENST00000517801 SKIP12755 728 aa9.98□□□□□ -0.81
FAM49B-204ENST00000517801 RAB15P59190 212 aa9.98□□□□□ -0.81
FAM49B-204ENST00000517801 NR5A1Q13285 461 aa9.98□□□□□ -0.81
FAM49B-204ENST00000517801 TBC1D9Q6ZT07 1266 aa9.98□□□□□ -0.81
FAM49B-204ENST00000517801 WASF2Q9Y6W5 498 aa9.98□□□□□ -0.81
FAM49B-204ENST00000517801 PALM3A6NDB9 673 aaPredicted RBP9.97□□□□□ -0.81
FAM49B-204ENST00000517801 ATP9BO43861 1147 aa9.97□□□□□ -0.81
FAM49B-204ENST00000517801 TFIP11Q9UBB9 837 aaKnown RBP9.97□□□□□ -0.81
FAM49B-204ENST00000517801 PDZRN3Q9UPQ7 1066 aa9.97□□□□□ -0.81
FAM49B-204ENST00000517801 J3QL48 77 aa9.96□□□□□ -0.82
FAM49B-204ENST00000517801 DHX9Q08211 1270 aaKnown RBP9.96□□□□□ -0.82
FAM49B-204ENST00000517801 PLPP7Q8NBV4 271 aa9.96□□□□□ -0.82
FAM49B-204ENST00000517801 CHIC2Q9UKJ5 165 aa9.96□□□□□ -0.82
FAM49B-204ENST00000517801 MAP7D1Q3KQU3 841 aa9.95□□□□□ -0.82
FAM49B-204ENST00000517801 CCDC116Q8IYX3 515 aa9.95□□□□□ -0.82
FAM49B-204ENST00000517801 CCDC85AQ96PX6 553 aaPredicted RBP9.95□□□□□ -0.82
FAM49B-204ENST00000517801 DOLKQ9UPQ8 538 aa9.95□□□□□ -0.82
FAM49B-204ENST00000517801 NNTQ13423 1086 aa9.94□□□□□ -0.82
FAM49B-204ENST00000517801 CFAP70Q5T0N1 1121 aa9.94□□□□□ -0.82
FAM49B-204ENST00000517801 PCDHB11Q9Y5F2 797 aa9.94□□□□□ -0.82
FAM49B-204ENST00000517801 MAFBQ9Y5Q3 323 aaPredicted RBP9.94□□□□□ -0.82
FAM49B-204ENST00000517801 USP17L5A8MUK1 530 aa9.93□□□□□ -0.82
FAM49B-204ENST00000517801 ERVH48-1M5A8F1 160 aa9.93□□□□□ -0.82
FAM49B-204ENST00000517801 PPP1R15AO75807 674 aaPredicted RBP9.93□□□□□ -0.82
FAM49B-204ENST00000517801 NR3C2P08235 984 aa9.93□□□□□ -0.82
FAM49B-204ENST00000517801 SMPD1P17405 629 aa9.93□□□□□ -0.82
FAM49B-204ENST00000517801 TSGA10IPQ3SY00 556 aa9.93□□□□□ -0.82
FAM49B-204ENST00000517801 TRAF7Q6Q0C0 670 aa9.93□□□□□ -0.82
FAM49B-204ENST00000517801 LZTS3O60299 673 aaPredicted RBP9.92□□□□□ -0.82
FAM49B-204ENST00000517801 LMOD1P29536 600 aaPredicted RBP9.92□□□□□ -0.82
FAM49B-204ENST00000517801 PPP1R26Q5T8A7 1209 aaPredicted RBP9.92□□□□□ -0.82
FAM49B-204ENST00000517801 USP17L3A6NCW0 530 aa9.91□□□□□ -0.82
FAM49B-204ENST00000517801 USP17L4A6NCW7 530 aa9.91□□□□□ -0.82
FAM49B-204ENST00000517801 RFX1P22670 979 aa9.91□□□□□ -0.82
FAM49B-204ENST00000517801 USP17L2Q6R6M4 530 aa9.91□□□□□ -0.82
FAM49B-204ENST00000517801 USP17L1Q7RTZ2 530 aa9.91□□□□□ -0.82
FAM49B-204ENST00000517801 PLEKHM2Q8IWE5 1019 aa9.91□□□□□ -0.82
FAM49B-204ENST00000517801 TRIM52Q96A61 297 aa9.91□□□□□ -0.82
FAM49B-204ENST00000517801 EMILIN1Q9Y6C2 1016 aa9.91□□□□□ -0.82
FAM49B-204ENST00000517801 NCOA4Q13772 614 aa9.9□□□□□ -0.82
FAM49B-204ENST00000517801 EML3Q32P44 896 aa9.9□□□□□ -0.82
FAM49B-204ENST00000517801 OXLD1Q5BKU9 147 aa9.9□□□□□ -0.82
FAM49B-204ENST00000517801 DEPDC4Q8N2C3 294 aa9.9□□□□□ -0.82
FAM49B-204ENST00000517801 CDCA7Q9BWT1 371 aaPredicted RBP9.9□□□□□ -0.82
FAM49B-204ENST00000517801 TMPRSS4Q9NRS4 437 aa9.9□□□□□ -0.82
FAM49B-204ENST00000517801 PGPEP1Q9NXJ5 209 aa9.9□□□□□ -0.82
FAM49B-204ENST00000517801 FAM187AA6NFU0 413 aa9.88□□□□□ -0.83
FAM49B-204ENST00000517801 GFRA3O60609 400 aa9.88□□□□□ -0.83
FAM49B-204ENST00000517801 ZNF784Q8NCA9 323 aaPredicted RBP9.88□□□□□ -0.83
FAM49B-204ENST00000517801 PBXIP1Q96AQ6 731 aa9.88□□□□□ -0.83
FAM49B-204ENST00000517801 SIRT1Q96EB6 747 aa9.88□□□□□ -0.83
FAM49B-204ENST00000517801 NRG2O14511 850 aaPredicted RBP9.87□□□□□ -0.83
FAM49B-204ENST00000517801 WDR4P57081 412 aaKnown RBP9.87□□□□□ -0.83
FAM49B-204ENST00000517801 ERVK-9P63128 1117 aa9.87□□□□□ -0.83
FAM49B-204ENST00000517801 MYT1Q01538 1121 aa9.87□□□□□ -0.83
FAM49B-204ENST00000517801 USP4Q13107 963 aa9.87□□□□□ -0.83
FAM49B-204ENST00000517801 CC2D2BQ6DHV5 1058 aa9.87□□□□□ -0.83
FAM49B-204ENST00000517801 HPS1Q92902 700 aa9.87□□□□□ -0.83
FAM49B-204ENST00000517801 CYLDQ9NQC7 956 aa9.87□□□□□ -0.83
FAM49B-204ENST00000517801 MYCP01106 439 aaPredicted RBP9.86□□□□□ -0.83
FAM49B-204ENST00000517801 KLF16Q9BXK1 252 aaPredicted RBP9.86□□□□□ -0.83
FAM49B-204ENST00000517801 ESF1Q9H501 851 aaKnown RBP9.86□□□□□ -0.83
FAM49B-204ENST00000517801 NOD1Q9Y239 953 aa9.86□□□□□ -0.83
FAM49B-204ENST00000517801 ZIC2O95409 532 aaPredicted RBP9.85□□□□□ -0.83
FAM49B-204ENST00000517801 SCTRP47872 440 aa9.85□□□□□ -0.83
FAM49B-204ENST00000517801 ITPKCQ96DU7 683 aa9.85□□□□□ -0.83
FAM49B-204ENST00000517801 VRTNQ9H8Y1 702 aa9.85□□□□□ -0.83
FAM49B-204ENST00000517801 MKRN1Q9UHC7 482 aaKnown RBP9.85□□□□□ -0.83
FAM49B-204ENST00000517801 ACIN1Q9UKV3 1341 aaKnown RBP9.84□□□□□ -0.83
FAM49B-204ENST00000517801 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.84□□□□□ -0.83
FAM49B-204ENST00000517801 LILRA1O75019 489 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms