RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 ABCA9Q8IUA7 1624 aa4.15□□□□□ -1.75
SKP1-204ENST00000517691 IRS1P35568 1242 aa4.15□□□□□ -1.75
SKP1-204ENST00000517691 HIC1Q14526 733 aa4.15□□□□□ -1.75
SKP1-204ENST00000517691 TSR1Q2NL82 804 aaKnown RBP4.15□□□□□ -1.75
SKP1-204ENST00000517691 AFAP1Q8N556 730 aa4.15□□□□□ -1.75
SKP1-204ENST00000517691 ARHGAP5Q13017 1502 aa4.15□□□□□ -1.75
SKP1-204ENST00000517691 LRRC9Q6ZRR7 1453 aa4.15□□□□□ -1.75
SKP1-204ENST00000517691 COL17A1Q9UMD9 1497 aaPredicted RBP4.15□□□□□ -1.75
SKP1-204ENST00000517691 SCAPERQ9BY12 1400 aa4.15□□□□□ -1.75
SKP1-204ENST00000517691 TIAM1Q13009 1591 aa4.14□□□□□ -1.75
SKP1-204ENST00000517691 TTC37Q6PGP7 1564 aa4.14□□□□□ -1.75
SKP1-204ENST00000517691 TRIM6-TRIM34B2RNG4 842 aa4.14□□□□□ -1.75
SKP1-204ENST00000517691 C3orf80F5H4A9 247 aa4.14□□□□□ -1.75
SKP1-204ENST00000517691 FOXC1Q12948 553 aa4.14□□□□□ -1.75
SKP1-204ENST00000517691 PTGDRQ13258 359 aa4.14□□□□□ -1.75
SKP1-204ENST00000517691 RBM33Q96EV2 1170 aaKnown RBP4.14□□□□□ -1.75
SKP1-204ENST00000517691 KRTAP9-8Q9BYQ0 159 aa4.14□□□□□ -1.75
SKP1-204ENST00000517691 LRRIQ1Q96JM4 1722 aa4.14□□□□□ -1.75
SKP1-204ENST00000517691 NEO1Q92859 1461 aa4.14□□□□□ -1.75
SKP1-204ENST00000517691 CFAP43Q8NDM7 1665 aa4.14□□□□□ -1.75
SKP1-204ENST00000517691 KDM6BO15054 1643 aa4.14□□□□□ -1.75
SKP1-204ENST00000517691 ARID4BQ4LE39 1312 aaPredicted RBP4.14□□□□□ -1.75
SKP1-204ENST00000517691 EHBP1L1Q8N3D4 1523 aa4.14□□□□□ -1.75
SKP1-204ENST00000517691 GPATCH8Q9UKJ3 1502 aaKnown RBP4.14□□□□□ -1.75
SKP1-204ENST00000517691 COBLO75128 1261 aa4.14□□□□□ -1.75
SKP1-204ENST00000517691 DENND4BO75064 1496 aaPredicted RBP4.14□□□□□ -1.75
SKP1-204ENST00000517691 ADGRL1O94910 1474 aa4.14□□□□□ -1.75
SKP1-204ENST00000517691 NCOA2Q15596 1464 aa4.14□□□□□ -1.75
SKP1-204ENST00000517691 MAP3K1Q13233 1512 aa4.13□□□□□ -1.75
SKP1-204ENST00000517691 FAM50AQ14320 339 aaKnown RBP4.13□□□□□ -1.75
SKP1-204ENST00000517691 DDRGK1Q96HY6 314 aa4.13□□□□□ -1.75
SKP1-204ENST00000517691 SPOCK3Q9BQ16 436 aa4.13□□□□□ -1.75
SKP1-204ENST00000517691 NPDC1Q9NQX5 325 aaPredicted RBP4.13□□□□□ -1.75
SKP1-204ENST00000517691 ARAP3Q8WWN8 1544 aa4.13□□□□□ -1.75
SKP1-204ENST00000517691 PPRC1Q5VV67 1664 aaKnown RBP4.13□□□□□ -1.75
SKP1-204ENST00000517691 TSPY4P0CV99 314 aa4.12□□□□□ -1.75
SKP1-204ENST00000517691 TSPY10P0CW01 314 aa4.12□□□□□ -1.75
SKP1-204ENST00000517691 REPIN1Q9BWE0 567 aaKnown RBP4.12□□□□□ -1.75
SKP1-204ENST00000517691 SPAG9O60271 1321 aaKnown RBP4.12□□□□□ -1.75
SKP1-204ENST00000517691 SLURP2P0DP57 97 aa4.12□□□□□ -1.75
SKP1-204ENST00000517691 FBXW7Q969H0 707 aa4.12□□□□□ -1.75
SKP1-204ENST00000517691 TRAPPC8Q9Y2L5 1435 aa4.11□□□□□ -1.75
SKP1-204ENST00000517691 APBB1O00213 710 aa4.11□□□□□ -1.75
SKP1-204ENST00000517691 MS4A1P11836 297 aa4.11□□□□□ -1.75
SKP1-204ENST00000517691 ITGAEP38570 1179 aa4.11□□□□□ -1.75
SKP1-204ENST00000517691 MLECQ14165 292 aa4.11□□□□□ -1.75
SKP1-204ENST00000517691 RSPH4AQ5TD94 716 aa4.11□□□□□ -1.75
SKP1-204ENST00000517691 SUPT6HQ7KZ85 1726 aaKnown RBP4.11□□□□□ -1.75
SKP1-204ENST00000517691 CFAP74Q9C0B2 1584 aa4.11□□□□□ -1.75
SKP1-204ENST00000517691 MYOM3Q5VTT5 1437 aa4.11□□□□□ -1.75
SKP1-204ENST00000517691 POGZQ7Z3K3 1410 aa4.11□□□□□ -1.75
SKP1-204ENST00000517691 SCARF2Q96GP6 870 aaPredicted RBP4.11□□□□□ -1.75
SKP1-204ENST00000517691 CDHR5Q9HBB8 845 aa4.11□□□□□ -1.75
SKP1-204ENST00000517691 GOPCQ9HD26 462 aa4.11□□□□□ -1.75
SKP1-204ENST00000517691 CHIC2Q9UKJ5 165 aa4.11□□□□□ -1.75
SKP1-204ENST00000517691 MYO5CQ9NQX4 1742 aa4.1□□□□□ -1.75
SKP1-204ENST00000517691 ZNF518AQ6AHZ1 1483 aa4.1□□□□□ -1.75
SKP1-204ENST00000517691 PLEKHH2Q8IVE3 1493 aa4.1□□□□□ -1.75
SKP1-204ENST00000517691 KIAA1107Q9UPP5 1409 aa4.1□□□□□ -1.75
SKP1-204ENST00000517691 ARHGEF12Q9NZN5 1544 aa4.1□□□□□ -1.75
SKP1-204ENST00000517691 APLP1P51693 650 aa4.1□□□□□ -1.75
SKP1-204ENST00000517691 GIGYF2Q6Y7W6 1299 aaKnown RBP4.1□□□□□ -1.75
SKP1-204ENST00000517691 GALNT6Q8NCL4 622 aa4.1□□□□□ -1.75
SKP1-204ENST00000517691 ZNF428Q96B54 188 aa4.1□□□□□ -1.75
SKP1-204ENST00000517691 PHOX2BQ99453 314 aa4.1□□□□□ -1.75
SKP1-204ENST00000517691 FAM198AQ9UFP1 575 aa4.1□□□□□ -1.75
SKP1-204ENST00000517691 MIA2Q96PC5 1412 aa4.1□□□□□ -1.75
SKP1-204ENST00000517691 YEATS2Q9ULM3 1422 aa4.1□□□□□ -1.75
SKP1-204ENST00000517691 PREX2Q70Z35 1606 aa4.1□□□□□ -1.75
SKP1-204ENST00000517691 CAMSAP2Q08AD1 1489 aa4.09□□□□□ -1.75
SKP1-204ENST00000517691 VEGFBP49765 207 aa4.09□□□□□ -1.75
SKP1-204ENST00000517691 EN1Q05925 392 aaPredicted RBP4.09□□□□□ -1.75
SKP1-204ENST00000517691 LAMC2Q13753 1193 aa4.09□□□□□ -1.75
SKP1-204ENST00000517691 TTLL12Q14166 644 aaPredicted RBP4.09□□□□□ -1.75
SKP1-204ENST00000517691 C6orf132Q5T0Z8 1188 aa4.09□□□□□ -1.75
SKP1-204ENST00000517691 ESF1Q9H501 851 aaKnown RBP4.09□□□□□ -1.75
SKP1-204ENST00000517691 RRP7BPQ9NSQ0 103 aa4.09□□□□□ -1.75
SKP1-204ENST00000517691 SYCP2Q9BX26 1530 aa4.09□□□□□ -1.75
SKP1-204ENST00000517691 FGD6Q6ZV73 1430 aa4.09□□□□□ -1.75
SKP1-204ENST00000517691 SAMD9LQ8IVG5 1584 aa4.09□□□□□ -1.76
SKP1-204ENST00000517691 SMAPO00193 183 aa4.09□□□□□ -1.76
SKP1-204ENST00000517691 RAD21O60216 631 aa4.09□□□□□ -1.76
SKP1-204ENST00000517691 PHF14O94880 888 aa4.09□□□□□ -1.76
SKP1-204ENST00000517691 COPS2P61201 443 aa4.09□□□□□ -1.76
SKP1-204ENST00000517691 KRTAP4-5Q9BYR2 181 aa4.09□□□□□ -1.76
SKP1-204ENST00000517691 CDC42BPBQ9Y5S2 1711 aa4.09□□□□□ -1.76
SKP1-204ENST00000517691 ABCC1P33527 1531 aa4.08□□□□□ -1.76
SKP1-204ENST00000517691 ATP10AO60312 1499 aa4.08□□□□□ -1.76
SKP1-204ENST00000517691 MAGI2Q86UL8 1455 aa4.08□□□□□ -1.76
SKP1-204ENST00000517691 MBD5Q9P267 1494 aa4.08□□□□□ -1.76
SKP1-204ENST00000517691 CDC42BPAQ5VT25 1732 aa4.08□□□□□ -1.76
SKP1-204ENST00000517691 TTC24A2A3L6 582 aaPredicted RBP4.08□□□□□ -1.76
SKP1-204ENST00000517691 RPIAP49247 311 aa4.08□□□□□ -1.76
SKP1-204ENST00000517691 GGT6Q6P531 493 aa4.08□□□□□ -1.76
SKP1-204ENST00000517691 SAMD7Q7Z3H4 446 aa4.08□□□□□ -1.76
SKP1-204ENST00000517691 PACS2Q86VP3 889 aa4.08□□□□□ -1.76
SKP1-204ENST00000517691 RGS22Q8NE09 1264 aa4.08□□□□□ -1.76
SKP1-204ENST00000517691 EPAS1Q99814 870 aa4.08□□□□□ -1.76
SKP1-204ENST00000517691 ZFYVE16Q7Z3T8 1539 aa4.08□□□□□ -1.76
SKP1-204ENST00000517691 ITSN2Q9NZM3 1697 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms