RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 ELOAQ14241 798 aaKnown RBP9.49□□□□□ -0.89
CTNNA1-202ENST00000517533 SLFNL1Q499Z3 407 aa9.49□□□□□ -0.89
CTNNA1-202ENST00000517533 PLA2G2CQ5R387 149 aa9.49□□□□□ -0.89
CTNNA1-202ENST00000517533 ZNF511Q8NB15 262 aa9.49□□□□□ -0.89
CTNNA1-202ENST00000517533 GIGYF1O75420 1035 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-202ENST00000517533 BRD1O95696 1058 aa9.48□□□□□ -0.89
CTNNA1-202ENST00000517533 ZBTB33Q86T24 672 aa9.48□□□□□ -0.89
CTNNA1-202ENST00000517533 NOVA2Q9UNW9 492 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-202ENST00000517533 LOC105371045A0A1W2PR82 267 aa9.47□□□□□ -0.89
CTNNA1-202ENST00000517533 USP17L15C9J2P7 530 aa9.47□□□□□ -0.89
CTNNA1-202ENST00000517533 USP17L10C9JJH3 530 aa9.47□□□□□ -0.89
CTNNA1-202ENST00000517533 USP17L13C9JLJ4 530 aa9.47□□□□□ -0.89
CTNNA1-202ENST00000517533 USP17L12C9JPN9 530 aa9.47□□□□□ -0.89
CTNNA1-202ENST00000517533 USP17L11C9JVI0 530 aa9.47□□□□□ -0.89
CTNNA1-202ENST00000517533 USP17L21D6R901 530 aa9.47□□□□□ -0.89
CTNNA1-202ENST00000517533 USP17L18D6R9N7 530 aa9.47□□□□□ -0.89
CTNNA1-202ENST00000517533 USP17L22D6RA61 530 aa9.47□□□□□ -0.89
CTNNA1-202ENST00000517533 USP17L17D6RBQ6 530 aa9.47□□□□□ -0.89
CTNNA1-202ENST00000517533 USP17L19D6RCP7 530 aa9.47□□□□□ -0.89
CTNNA1-202ENST00000517533 USP17L20D6RJB6 530 aa9.47□□□□□ -0.89
CTNNA1-202ENST00000517533 SH3BP2P78314 561 aa9.47□□□□□ -0.89
CTNNA1-202ENST00000517533 FAM69CQ0P6D2 419 aa9.47□□□□□ -0.89
CTNNA1-202ENST00000517533 USP17L24Q0WX57 530 aa9.47□□□□□ -0.89
CTNNA1-202ENST00000517533 PTK7Q13308 1070 aa9.47□□□□□ -0.89
CTNNA1-202ENST00000517533 CLDN10P78369 228 aa9.46□□□□□ -0.9
CTNNA1-202ENST00000517533 PHLDB3Q6NSJ2 640 aa9.46□□□□□ -0.9
CTNNA1-202ENST00000517533 DZIP3Q86Y13 1208 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-202ENST00000517533 CDCA7Q9BWT1 371 aaPredicted RBP9.46□□□□□ -0.9
CTNNA1-202ENST00000517533 C1QTNF2Q9BXJ5 285 aa9.46□□□□□ -0.9
CTNNA1-202ENST00000517533 FAM196BA6NMK8 535 aa9.45□□□□□ -0.9
CTNNA1-202ENST00000517533 DKK1O94907 266 aa9.45□□□□□ -0.9
CTNNA1-202ENST00000517533 KIAA1024Q9UPX6 916 aa9.45□□□□□ -0.9
CTNNA1-202ENST00000517533 RASA1P20936 1047 aa9.44□□□□□ -0.9
CTNNA1-202ENST00000517533 MCCD1P59942 119 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-202ENST00000517533 PDE4CQ08493 712 aa9.44□□□□□ -0.9
CTNNA1-202ENST00000517533 KCNA1Q09470 495 aa9.44□□□□□ -0.9
CTNNA1-202ENST00000517533 RNF223E7ERA6 249 aa9.43□□□□□ -0.9
CTNNA1-202ENST00000517533 SKOR1P84550 965 aa9.43□□□□□ -0.9
CTNNA1-202ENST00000517533 BPHLQ86WA6 291 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-202ENST00000517533 ZBTB7BO15156 539 aaPredicted RBP9.42□□□□□ -0.9
CTNNA1-202ENST00000517533 AGERQ15109 404 aa9.42□□□□□ -0.9
CTNNA1-202ENST00000517533 IVNS1ABPQ9Y6Y0 642 aa9.42□□□□□ -0.9
CTNNA1-202ENST00000517533 ESPNB1AK53 854 aa9.41□□□□□ -0.9
CTNNA1-202ENST00000517533 ITGBL1O95965 494 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-202ENST00000517533 MAP7D1Q3KQU3 841 aa9.41□□□□□ -0.9
CTNNA1-202ENST00000517533 OGFOD1Q8N543 542 aa9.41□□□□□ -0.9
CTNNA1-202ENST00000517533 ATP5J2-PTCD1G3V325 749 aa9.4□□□□□ -0.9
CTNNA1-202ENST00000517533 SCNN1AP37088 669 aa9.4□□□□□ -0.9
CTNNA1-202ENST00000517533 DPYDQ12882 1025 aa9.4□□□□□ -0.9
CTNNA1-202ENST00000517533 OXLD1Q5BKU9 147 aa9.4□□□□□ -0.9
CTNNA1-202ENST00000517533 ANKMY2Q8IV38 441 aa9.4□□□□□ -0.9
CTNNA1-202ENST00000517533 ZNF594Q96JF6 807 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-202ENST00000517533 DOLKQ9UPQ8 538 aa9.4□□□□□ -0.9
CTNNA1-202ENST00000517533 EML3Q32P44 896 aa9.39□□□□□ -0.91
CTNNA1-202ENST00000517533 TRMT44Q8IYL2 757 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-202ENST00000517533 EMID1Q96A84 441 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-202ENST00000517533 LZTS3O60299 673 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-202ENST00000517533 KCNC4Q03721 635 aa9.38□□□□□ -0.91
CTNNA1-202ENST00000517533 TRIM32Q13049 653 aa9.38□□□□□ -0.91
CTNNA1-202ENST00000517533 TMCO4Q5TGY1 634 aa9.38□□□□□ -0.91
CTNNA1-202ENST00000517533 LARP1Q6PKG0 1096 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-202ENST00000517533 RGS22Q8NE09 1264 aa9.38□□□□□ -0.91
CTNNA1-202ENST00000517533 ZNF592Q92610 1267 aa9.38□□□□□ -0.91
CTNNA1-202ENST00000517533 PCDHGA11Q9Y5H2 935 aa9.38□□□□□ -0.91
CTNNA1-202ENST00000517533 SSFA2P28290 1259 aa9.37□□□□□ -0.91
CTNNA1-202ENST00000517533 MFAP1P55081 439 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-202ENST00000517533 SLC10A4Q96EP9 437 aa9.37□□□□□ -0.91
CTNNA1-202ENST00000517533 DNAAF2Q9NVR5 837 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-202ENST00000517533 GTF2IP78347 998 aa9.36□□□□□ -0.91
CTNNA1-202ENST00000517533 TXNDC2Q86VQ3 553 aa9.36□□□□□ -0.91
CTNNA1-202ENST00000517533 FAM200AQ8TCP9 573 aa9.36□□□□□ -0.91
CTNNA1-202ENST00000517533 NOD1Q9Y239 953 aa9.36□□□□□ -0.91
CTNNA1-202ENST00000517533 LGR5O75473 907 aa9.35□□□□□ -0.91
CTNNA1-202ENST00000517533 SCTRP47872 440 aa9.35□□□□□ -0.91
CTNNA1-202ENST00000517533 PPP1R18Q6NYC8 613 aa9.35□□□□□ -0.91
CTNNA1-202ENST00000517533 ANKLE1Q8NAG6 615 aa9.35□□□□□ -0.91
CTNNA1-202ENST00000517533 CLP1Q92989 425 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-202ENST00000517533 MTMR7Q9Y216 660 aa9.35□□□□□ -0.91
CTNNA1-202ENST00000517533 PCDHB11Q9Y5F2 797 aa9.35□□□□□ -0.91
CTNNA1-202ENST00000517533 SFI1A8K8P3 1242 aa9.34□□□□□ -0.91
CTNNA1-202ENST00000517533 RAB15P59190 212 aa9.34□□□□□ -0.91
CTNNA1-202ENST00000517533 INTS6LQ5JSJ4 861 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-202ENST00000517533 SPNS2Q8IVW8 549 aa9.34□□□□□ -0.91
CTNNA1-202ENST00000517533 SIX5Q8N196 739 aa9.34□□□□□ -0.91
CTNNA1-202ENST00000517533 RNF166Q96A37 237 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-202ENST00000517533 KCTD15Q96SI1 283 aaPredicted RBP9.34□□□□□ -0.91
CTNNA1-202ENST00000517533 PCDH10Q9P2E7 1040 aa9.34□□□□□ -0.91
CTNNA1-202ENST00000517533 HCSTQ9UBK5 93 aa9.34□□□□□ -0.91
CTNNA1-202ENST00000517533 GNEQ9Y223 722 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-202ENST00000517533 IGSF3O75054 1194 aa9.33□□□□□ -0.92
CTNNA1-202ENST00000517533 LARGE2Q8N3Y3 721 aa9.33□□□□□ -0.92
CTNNA1-202ENST00000517533 NBPF20Q3BBV1 942 aa9.32□□□□□ -0.92
CTNNA1-202ENST00000517533 LIAT1Q6ZQX7 453 aa9.32□□□□□ -0.92
CTNNA1-202ENST00000517533 TRIM50Q86XT4 487 aa9.32□□□□□ -0.92
CTNNA1-202ENST00000517533 TPCN2Q8NHX9 752 aa9.32□□□□□ -0.92
CTNNA1-202ENST00000517533 PATL2C9JE40 543 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-202ENST00000517533 ERVH48-1M5A8F1 160 aa9.31□□□□□ -0.92
CTNNA1-202ENST00000517533 STAU1O95793 577 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-202ENST00000517533 OCLNQ16625 522 aa9.31□□□□□ -0.92
CTNNA1-202ENST00000517533 RNF20Q5VTR2 975 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms