RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 EN1Q05925 392 aaPredicted RBP12.47□□□□□ -0.41
PABPC1-202ENST00000517403 CCDC125Q86Z20 511 aa12.46□□□□□ -0.41
PABPC1-202ENST00000517403 AATKQ6ZMQ8 1374 aa12.45□□□□□ -0.42
PABPC1-202ENST00000517403 TTC21BQ7Z4L5 1316 aa12.45□□□□□ -0.42
PABPC1-202ENST00000517403 CRB1P82279 1406 aa12.45□□□□□ -0.42
PABPC1-202ENST00000517403 MYOM1P52179 1685 aa12.45□□□□□ -0.42
PABPC1-202ENST00000517403 EZH2Q15910 746 aaKnown RBP12.44□□□□□ -0.42
PABPC1-202ENST00000517403 BARGINQ6ZT62 677 aa12.44□□□□□ -0.42
PABPC1-202ENST00000517403 EVC2Q86UK5 1308 aa12.43□□□□□ -0.42
PABPC1-202ENST00000517403 TRIM37O94972 964 aa12.43□□□□□ -0.42
PABPC1-202ENST00000517403 NLRP6P59044 892 aa12.43□□□□□ -0.42
PABPC1-202ENST00000517403 TESK2Q96S53 571 aa12.43□□□□□ -0.42
PABPC1-202ENST00000517403 OVOS2A0A0J9YW53 1432 aa12.43□□□□□ -0.42
PABPC1-202ENST00000517403 OVOS2Q6IE36 1432 aa12.43□□□□□ -0.42
PABPC1-202ENST00000517403 RGPD2P0DJD1 1756 aa12.43□□□□□ -0.42
PABPC1-202ENST00000517403 A0A1W2PP64 1363 aa12.43□□□□□ -0.42
PABPC1-202ENST00000517403 BRD4O60885 1362 aaPredicted RBP12.43□□□□□ -0.42
PABPC1-202ENST00000517403 SHANK3Q9BYB0 1731 aa12.42□□□□□ -0.42
PABPC1-202ENST00000517403 FAM208AQ9UK61 1670 aaKnown RBP12.42□□□□□ -0.42
PABPC1-202ENST00000517403 ZBTB7CA1YPR0 619 aa12.42□□□□□ -0.42
PABPC1-202ENST00000517403 SOX12O15370 315 aa12.42□□□□□ -0.42
PABPC1-202ENST00000517403 NLRP13Q86W25 1043 aa12.42□□□□□ -0.42
PABPC1-202ENST00000517403 NME9Q86XW9 330 aa12.42□□□□□ -0.42
PABPC1-202ENST00000517403 CAMKK2Q96RR4 588 aa12.42□□□□□ -0.42
PABPC1-202ENST00000517403 RGPD3A6NKT7 1758 aaPredicted RBP12.42□□□□□ -0.42
PABPC1-202ENST00000517403 RGPD4Q7Z3J3 1758 aa12.42□□□□□ -0.42
PABPC1-202ENST00000517403 CASZ1Q86V15 1759 aa12.41□□□□□ -0.42
PABPC1-202ENST00000517403 ARHGEF25Q86VW2 580 aa12.41□□□□□ -0.42
PABPC1-202ENST00000517403 TCP11L2Q8N4U5 519 aa12.41□□□□□ -0.42
PABPC1-202ENST00000517403 KTN1Q86UP2 1357 aaKnown RBP12.41□□□□□ -0.42
PABPC1-202ENST00000517403 CACNB1Q02641 598 aaPredicted RBP12.4□□□□□ -0.42
PABPC1-202ENST00000517403 SLC12A5Q9H2X9 1139 aa12.4□□□□□ -0.42
PABPC1-202ENST00000517403 ATF5Q9Y2D1 282 aaPredicted RBP12.4□□□□□ -0.42
PABPC1-202ENST00000517403 ABCC6O95255 1503 aa12.4□□□□□ -0.42
PABPC1-202ENST00000517403 USP31Q70CQ4 1352 aa12.4□□□□□ -0.42
PABPC1-202ENST00000517403 R3HDM1Q15032 1099 aaKnown RBP12.39□□□□□ -0.43
PABPC1-202ENST00000517403 CARD11Q9BXL7 1154 aa12.39□□□□□ -0.43
PABPC1-202ENST00000517403 WDR17Q8IZU2 1322 aa12.38□□□□□ -0.43
PABPC1-202ENST00000517403 BAG6P46379 1132 aa12.38□□□□□ -0.43
PABPC1-202ENST00000517403 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.38□□□□□ -0.43
PABPC1-202ENST00000517403 TONSLQ96HA7 1378 aa12.38□□□□□ -0.43
PABPC1-202ENST00000517403 NHSQ6T4R5 1651 aa12.38□□□□□ -0.43
PABPC1-202ENST00000517403 PAPPAQ13219 1627 aa12.37□□□□□ -0.43
PABPC1-202ENST00000517403 FBLN1P23142 703 aa12.37□□□□□ -0.43
PABPC1-202ENST00000517403 MARCH10Q8NA82 808 aaPredicted RBP12.37□□□□□ -0.43
PABPC1-202ENST00000517403 ANO8Q9HCE9 1232 aaPredicted RBP12.37□□□□□ -0.43
PABPC1-202ENST00000517403 OVOS2A0A0G2JMS6 1433 aa12.37□□□□□ -0.43
PABPC1-202ENST00000517403 TNS2Q63HR2 1409 aa12.37□□□□□ -0.43
PABPC1-202ENST00000517403 EDC4Q6P2E9 1401 aaKnown RBP12.37□□□□□ -0.43
PABPC1-202ENST00000517403 TTC21AQ8NDW8 1320 aa12.37□□□□□ -0.43
PABPC1-202ENST00000517403 EVA1CP58658 441 aa12.36□□□□□ -0.43
PABPC1-202ENST00000517403 SF3B2Q13435 895 aaKnown RBP12.36□□□□□ -0.43
PABPC1-202ENST00000517403 FAM196AQ6ZSG2 479 aa12.35□□□□□ -0.43
PABPC1-202ENST00000517403 PDGFDQ9GZP0 370 aaPredicted RBP12.35□□□□□ -0.43
PABPC1-202ENST00000517403 BTAF1O14981 1849 aa12.34□□□□□ -0.43
PABPC1-202ENST00000517403 KIF20BQ96Q89 1820 aa12.34□□□□□ -0.43
PABPC1-202ENST00000517403 ST20-MTHFSA0A0A6YYL1 179 aa12.34□□□□□ -0.43
PABPC1-202ENST00000517403 APBA3O96018 575 aa12.34□□□□□ -0.43
PABPC1-202ENST00000517403 THRAP3Q9Y2W1 955 aaKnown RBP12.34□□□□□ -0.43
PABPC1-202ENST00000517403 ERBB3P21860 1342 aa12.34□□□□□ -0.43
PABPC1-202ENST00000517403 TOM1L2Q6ZVM7 507 aa12.33□□□□□ -0.44
PABPC1-202ENST00000517403 PROM2Q8N271 834 aa12.33□□□□□ -0.44
PABPC1-202ENST00000517403 DOT1LQ8TEK3 1739 aa12.33□□□□□ -0.44
PABPC1-202ENST00000517403 TUBGCP6Q96RT7 1819 aa12.32□□□□□ -0.44
PABPC1-202ENST00000517403 BCL9O00512 1426 aa12.32□□□□□ -0.44
PABPC1-202ENST00000517403 USP47Q96K76 1375 aa12.31□□□□□ -0.44
PABPC1-202ENST00000517403 PDE3BQ13370 1112 aa12.31□□□□□ -0.44
PABPC1-202ENST00000517403 ZNF692Q9BU19 519 aaPredicted RBP12.31□□□□□ -0.44
PABPC1-202ENST00000517403 CARD10Q9BWT7 1032 aa12.31□□□□□ -0.44
PABPC1-202ENST00000517403 MEGF6O75095 1541 aa12.31□□□□□ -0.44
PABPC1-202ENST00000517403 KCNQ2O43526 872 aa12.3□□□□□ -0.44
PABPC1-202ENST00000517403 TRIM26Q12899 539 aaPredicted RBP12.3□□□□□ -0.44
PABPC1-202ENST00000517403 TMC1Q8TDI8 760 aa12.3□□□□□ -0.44
PABPC1-202ENST00000517403 ANKRD26Q9UPS8 1709 aa12.3□□□□□ -0.44
PABPC1-202ENST00000517403 PARD3Q8TEW0 1356 aa12.3□□□□□ -0.44
PABPC1-202ENST00000517403 TOGARAM1Q9Y4F4 1720 aa12.29□□□□□ -0.44
PABPC1-202ENST00000517403 DDB1Q16531 1140 aa12.29□□□□□ -0.44
PABPC1-202ENST00000517403 MAP3K19Q56UN5 1328 aa12.29□□□□□ -0.44
PABPC1-202ENST00000517403 KCNH5Q8NCM2 988 aa12.28□□□□□ -0.44
PABPC1-202ENST00000517403 ANKRD36BQ8N2N9 1353 aa12.28□□□□□ -0.44
PABPC1-202ENST00000517403 DCAF8L1A6NGE4 600 aa12.27□□□□□ -0.45
PABPC1-202ENST00000517403 ANKRD24Q8TF21 1146 aa12.27□□□□□ -0.45
PABPC1-202ENST00000517403 NSD2O96028 1365 aa12.27□□□□□ -0.45
PABPC1-202ENST00000517403 CCDC7Q96M83 1385 aa12.27□□□□□ -0.45
PABPC1-202ENST00000517403 CSB-PGBD3P0DP91 1061 aa12.25□□□□□ -0.45
PABPC1-202ENST00000517403 ACSBG1Q96GR2 724 aa12.25□□□□□ -0.45
PABPC1-202ENST00000517403 CARD14Q9BXL6 1004 aa12.25□□□□□ -0.45
PABPC1-202ENST00000517403 LY75O60449 1722 aa12.25□□□□□ -0.45
PABPC1-202ENST00000517403 PUS7Q96PZ0 661 aaKnown RBP12.24□□□□□ -0.45
PABPC1-202ENST00000517403 BCL11BQ9C0K0 894 aaPredicted RBP12.24□□□□□ -0.45
PABPC1-202ENST00000517403 GGNBP2Q9H3C7 697 aa12.24□□□□□ -0.45
PABPC1-202ENST00000517403 NINLQ9Y2I6 1382 aa12.23□□□□□ -0.45
PABPC1-202ENST00000517403 FYB1O15117 783 aa12.23□□□□□ -0.45
PABPC1-202ENST00000517403 HOXC9P31274 260 aa12.23□□□□□ -0.45
PABPC1-202ENST00000517403 RRS1Q15050 365 aaKnown RBP12.23□□□□□ -0.45
PABPC1-202ENST00000517403 HDGFL2Q7Z4V5 671 aaPredicted RBP12.23□□□□□ -0.45
PABPC1-202ENST00000517403 NLRP2Q9NX02 1062 aa12.23□□□□□ -0.45
PABPC1-202ENST00000517403 COL24A1Q17RW2 1714 aa12.23□□□□□ -0.45
PABPC1-202ENST00000517403 PKD1L3Q7Z443 1732 aa12.23□□□□□ -0.45
PABPC1-202ENST00000517403 PLSCR1O15162 318 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms