RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 SEPT12Q8IYM1 358 aa8.41□□□□□ -1.06
SCARNA18.1-201ENST00000516330 PEAK1Q9H792 1746 aa8.4□□□□□ -1.06
SCARNA18.1-201ENST00000516330 OVOS2A0A0G2JMS6 1433 aa8.4□□□□□ -1.06
SCARNA18.1-201ENST00000516330 BCL9O00512 1426 aa8.4□□□□□ -1.06
SCARNA18.1-201ENST00000516330 TNS2Q63HR2 1409 aa8.4□□□□□ -1.06
SCARNA18.1-201ENST00000516330 KIF24Q5T7B8 1368 aa8.4□□□□□ -1.06
SCARNA18.1-201ENST00000516330 PARD3Q8TEW0 1356 aa8.4□□□□□ -1.06
SCARNA18.1-201ENST00000516330 WDR17Q8IZU2 1322 aa8.4□□□□□ -1.06
SCARNA18.1-201ENST00000516330 ZC3H6P61129 1189 aaKnown RBP8.4□□□□□ -1.06
SCARNA18.1-201ENST00000516330 KRT27Q7Z3Y8 459 aa8.4□□□□□ -1.06
SCARNA18.1-201ENST00000516330 ERBB3P21860 1342 aa8.39□□□□□ -1.07
SCARNA18.1-201ENST00000516330 CHRNA2Q15822 529 aa8.39□□□□□ -1.07
SCARNA18.1-201ENST00000516330 FAM98CQ17RN3 349 aaKnown RBP8.39□□□□□ -1.07
SCARNA18.1-201ENST00000516330 NUTM2GQ5VZR2 741 aa8.39□□□□□ -1.07
SCARNA18.1-201ENST00000516330 ARHGEF25Q86VW2 580 aa8.39□□□□□ -1.07
SCARNA18.1-201ENST00000516330 TCP11L2Q8N4U5 519 aa8.39□□□□□ -1.07
SCARNA18.1-201ENST00000516330 CCER1Q8TC90 406 aaPredicted RBP8.39□□□□□ -1.07
SCARNA18.1-201ENST00000516330 CDCA7Q9BWT1 371 aaPredicted RBP8.39□□□□□ -1.07
SCARNA18.1-201ENST00000516330 RREB1Q92766 1687 aa8.39□□□□□ -1.07
SCARNA18.1-201ENST00000516330 RGPD5Q99666 1765 aa8.38□□□□□ -1.07
SCARNA18.1-201ENST00000516330 A0A0G2JS52 829 aa8.38□□□□□ -1.07
SCARNA18.1-201ENST00000516330 MYT1Q01538 1121 aa8.38□□□□□ -1.07
SCARNA18.1-201ENST00000516330 TMC1Q8TDI8 760 aa8.38□□□□□ -1.07
SCARNA18.1-201ENST00000516330 PLEKHG5O94827 1062 aa8.37□□□□□ -1.07
SCARNA18.1-201ENST00000516330 EVA1CP58658 441 aa8.37□□□□□ -1.07
SCARNA18.1-201ENST00000516330 SF3B2Q13435 895 aaKnown RBP8.37□□□□□ -1.07
SCARNA18.1-201ENST00000516330 SLC12A5Q9H2X9 1139 aa8.37□□□□□ -1.07
SCARNA18.1-201ENST00000516330 STRN4Q9NRL3 753 aa8.37□□□□□ -1.07
SCARNA18.1-201ENST00000516330 SMG6Q86US8 1419 aaKnown RBP8.37□□□□□ -1.07
SCARNA18.1-201ENST00000516330 NSD2O96028 1365 aa8.36□□□□□ -1.07
SCARNA18.1-201ENST00000516330 PLEKHG2Q9H7P9 1386 aa8.36□□□□□ -1.07
SCARNA18.1-201ENST00000516330 EIF4G2P78344 907 aaKnown RBP eCLIP8.36□□□□□ -1.07
SCARNA18.1-201ENST00000516330 LARP1Q6PKG0 1096 aaKnown RBP8.36□□□□□ -1.07
SCARNA18.1-201ENST00000516330 NHSQ6T4R5 1651 aa8.36□□□□□ -1.07
SCARNA18.1-201ENST00000516330 LRP5O75197 1615 aa8.36□□□□□ -1.07
SCARNA18.1-201ENST00000516330 BAG6P46379 1132 aa8.35□□□□□ -1.07
SCARNA18.1-201ENST00000516330 FAM196AQ6ZSG2 479 aa8.35□□□□□ -1.07
SCARNA18.1-201ENST00000516330 NME9Q86XW9 330 aa8.35□□□□□ -1.07
SCARNA18.1-201ENST00000516330 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.35□□□□□ -1.07
SCARNA18.1-201ENST00000516330 COG3Q96JB2 828 aa8.35□□□□□ -1.07
SCARNA18.1-201ENST00000516330 CARD10Q9BWT7 1032 aa8.35□□□□□ -1.07
SCARNA18.1-201ENST00000516330 SBF2Q86WG5 1849 aa8.35□□□□□ -1.07
SCARNA18.1-201ENST00000516330 NSD3Q9BZ95 1437 aa8.35□□□□□ -1.07
SCARNA18.1-201ENST00000516330 TOM1L2Q6ZVM7 507 aa8.34□□□□□ -1.07
SCARNA18.1-201ENST00000516330 NUP188Q5SRE5 1749 aa8.34□□□□□ -1.07
SCARNA18.1-201ENST00000516330 FLT4P35916 1363 aa8.34□□□□□ -1.07
SCARNA18.1-201ENST00000516330 PDE3BQ13370 1112 aa8.33□□□□□ -1.08
SCARNA18.1-201ENST00000516330 CGNL1Q0VF96 1302 aa8.32□□□□□ -1.08
SCARNA18.1-201ENST00000516330 NCAPD2Q15021 1401 aa8.32□□□□□ -1.08
SCARNA18.1-201ENST00000516330 CSB-PGBD3P0DP91 1061 aa8.32□□□□□ -1.08
SCARNA18.1-201ENST00000516330 DDB1Q16531 1140 aa8.32□□□□□ -1.08
SCARNA18.1-201ENST00000516330 USP35Q9P2H5 1018 aa8.32□□□□□ -1.08
SCARNA18.1-201ENST00000516330 AXIN2Q9Y2T1 843 aa8.32□□□□□ -1.08
SCARNA18.1-201ENST00000516330 PKD1L3Q7Z443 1732 aa8.32□□□□□ -1.08
SCARNA18.1-201ENST00000516330 SHANK3Q9BYB0 1731 aa8.32□□□□□ -1.08
SCARNA18.1-201ENST00000516330 IP6K1Q92551 441 aa8.31□□□□□ -1.08
SCARNA18.1-201ENST00000516330 ZRANB1Q9UGI0 708 aa8.31□□□□□ -1.08
SCARNA18.1-201ENST00000516330 INSRP06213 1382 aa8.31□□□□□ -1.08
SCARNA18.1-201ENST00000516330 MAP3K19Q56UN5 1328 aa8.3□□□□□ -1.08
SCARNA18.1-201ENST00000516330 ZBTB7CA1YPR0 619 aa8.3□□□□□ -1.08
SCARNA18.1-201ENST00000516330 FYB1O15117 783 aa8.3□□□□□ -1.08
SCARNA18.1-201ENST00000516330 SOX12O15370 315 aa8.3□□□□□ -1.08
SCARNA18.1-201ENST00000516330 ANKRD24Q8TF21 1146 aa8.3□□□□□ -1.08
SCARNA18.1-201ENST00000516330 DOT1LQ8TEK3 1739 aa8.29□□□□□ -1.08
SCARNA18.1-201ENST00000516330 HSPA5P11021 654 aaKnown RBP8.29□□□□□ -1.08
SCARNA18.1-201ENST00000516330 IL2RBP14784 551 aa8.29□□□□□ -1.08
SCARNA18.1-201ENST00000516330 HOXC9P31274 260 aa8.29□□□□□ -1.08
SCARNA18.1-201ENST00000516330 AMPHP49418 695 aa8.28□□□□□ -1.08
SCARNA18.1-201ENST00000516330 PAPPAQ13219 1627 aa8.28□□□□□ -1.08
SCARNA18.1-201ENST00000516330 MEGF6O75095 1541 aa8.28□□□□□ -1.08
SCARNA18.1-201ENST00000516330 RGPD2P0DJD1 1756 aa8.27□□□□□ -1.08
SCARNA18.1-201ENST00000516330 BTAF1O14981 1849 aa8.27□□□□□ -1.09
SCARNA18.1-201ENST00000516330 EXOC5O00471 708 aa8.27□□□□□ -1.09
SCARNA18.1-201ENST00000516330 DEFB132Q7Z7B7 95 aa8.27□□□□□ -1.09
SCARNA18.1-201ENST00000516330 GGNBP2Q9H3C7 697 aa8.27□□□□□ -1.09
SCARNA18.1-201ENST00000516330 MAP2P11137 1827 aaKnown RBP8.26□□□□□ -1.09
SCARNA18.1-201ENST00000516330 QSER1Q2KHR3 1735 aa8.26□□□□□ -1.09
SCARNA18.1-201ENST00000516330 NPC1L1Q9UHC9 1359 aa8.26□□□□□ -1.09
SCARNA18.1-201ENST00000516330 PLSCR1O15162 318 aa8.26□□□□□ -1.09
SCARNA18.1-201ENST00000516330 TRIM37O94972 964 aa8.26□□□□□ -1.09
SCARNA18.1-201ENST00000516330 BCL11BQ9C0K0 894 aaPredicted RBP8.26□□□□□ -1.09
SCARNA18.1-201ENST00000516330 NLRP2Q9NX02 1062 aa8.26□□□□□ -1.09
SCARNA18.1-201ENST00000516330 CAMKK2Q96RR4 588 aa8.25□□□□□ -1.09
SCARNA18.1-201ENST00000516330 CARD14Q9BXL6 1004 aa8.25□□□□□ -1.09
SCARNA18.1-201ENST00000516330 LY75O60449 1722 aa8.25□□□□□ -1.09
SCARNA18.1-201ENST00000516330 PCDH11XQ9BZA7 1347 aa8.25□□□□□ -1.09
SCARNA18.1-201ENST00000516330 PCDH11YQ9BZA8 1340 aa8.25□□□□□ -1.09
SCARNA18.1-201ENST00000516330 CASZ1Q86V15 1759 aa8.25□□□□□ -1.09
SCARNA18.1-201ENST00000516330 APBA3O96018 575 aa8.24□□□□□ -1.09
SCARNA18.1-201ENST00000516330 RRS1Q15050 365 aaKnown RBP8.24□□□□□ -1.09
SCARNA18.1-201ENST00000516330 FAM182BQ5T319 152 aa8.24□□□□□ -1.09
SCARNA18.1-201ENST00000516330 MARCH10Q8NA82 808 aaPredicted RBP8.24□□□□□ -1.09
SCARNA18.1-201ENST00000516330 KIF7Q2M1P5 1343 aa8.24□□□□□ -1.09
SCARNA18.1-201ENST00000516330 WASHC2AQ641Q2 1341 aa8.24□□□□□ -1.09
SCARNA18.1-201ENST00000516330 HMGB2P26583 209 aaKnown RBP8.23□□□□□ -1.09
SCARNA18.1-201ENST00000516330 EN1Q05925 392 aaPredicted RBP8.23□□□□□ -1.09
SCARNA18.1-201ENST00000516330 RAPGEF4Q8WZA2 1011 aa8.23□□□□□ -1.09
SCARNA18.1-201ENST00000516330 TOGARAM1Q9Y4F4 1720 aa8.23□□□□□ -1.09
SCARNA18.1-201ENST00000516330 EZH2Q15910 746 aaKnown RBP8.22□□□□□ -1.09
SCARNA18.1-201ENST00000516330 NBPF14Q5TI25 921 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms