RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 DZIP3Q86Y13 1208 aaKnown RBP5.91□□□□□ -1.46
RNU6-390P-201ENST00000516259 ANKLE1Q8NAG6 615 aa5.91□□□□□ -1.46
RNU6-390P-201ENST00000516259 PLPP7Q8NBV4 271 aa5.91□□□□□ -1.46
RNU6-390P-201ENST00000516259 CDCA7Q9BWT1 371 aaPredicted RBP5.91□□□□□ -1.46
RNU6-390P-201ENST00000516259 GNEQ9Y223 722 aaKnown RBP5.91□□□□□ -1.46
RNU6-390P-201ENST00000516259 GGCXP38435 758 aa5.9□□□□□ -1.46
RNU6-390P-201ENST00000516259 ATP1A2P50993 1020 aa5.9□□□□□ -1.46
RNU6-390P-201ENST00000516259 PTPN5P54829 565 aa5.9□□□□□ -1.46
RNU6-390P-201ENST00000516259 KCNC4Q03721 635 aa5.9□□□□□ -1.46
RNU6-390P-201ENST00000516259 PTK7Q13308 1070 aa5.9□□□□□ -1.46
RNU6-390P-201ENST00000516259 EML3Q32P44 896 aa5.9□□□□□ -1.46
RNU6-390P-201ENST00000516259 ERFEQ4G0M1 354 aa5.9□□□□□ -1.46
RNU6-390P-201ENST00000516259 LARGE2Q8N3Y3 721 aa5.9□□□□□ -1.46
RNU6-390P-201ENST00000516259 CCDC24Q8N4L8 307 aa5.9□□□□□ -1.46
RNU6-390P-201ENST00000516259 MPNDQ8N594 471 aa5.9□□□□□ -1.46
RNU6-390P-201ENST00000516259 SIRT1Q96EB6 747 aa5.9□□□□□ -1.46
RNU6-390P-201ENST00000516259 MKRN1Q9UHC7 482 aaKnown RBP5.9□□□□□ -1.46
RNU6-390P-201ENST00000516259 FCF1Q9Y324 198 aaKnown RBP5.9□□□□□ -1.46
RNU6-390P-201ENST00000516259 MAP4K5Q9Y4K4 846 aa5.9□□□□□ -1.46
RNU6-390P-201ENST00000516259 S1PR4O95977 384 aa5.89□□□□□ -1.47
RNU6-390P-201ENST00000516259 RPIAP49247 311 aa5.89□□□□□ -1.47
RNU6-390P-201ENST00000516259 SWI5Q1ZZU3 235 aa5.89□□□□□ -1.47
RNU6-390P-201ENST00000516259 LARP1Q6PKG0 1096 aaKnown RBP5.89□□□□□ -1.47
RNU6-390P-201ENST00000516259 AEBP1Q8IUX7 1158 aa5.89□□□□□ -1.47
RNU6-390P-201ENST00000516259 BAP1Q92560 729 aa5.89□□□□□ -1.47
RNU6-390P-201ENST00000516259 ZMIZ1Q9ULJ6 1067 aa5.89□□□□□ -1.47
RNU6-390P-201ENST00000516259 USP17L15C9J2P7 530 aa5.88□□□□□ -1.47
RNU6-390P-201ENST00000516259 USP17L10C9JJH3 530 aa5.88□□□□□ -1.47
RNU6-390P-201ENST00000516259 USP17L13C9JLJ4 530 aa5.88□□□□□ -1.47
RNU6-390P-201ENST00000516259 USP17L12C9JPN9 530 aa5.88□□□□□ -1.47
RNU6-390P-201ENST00000516259 USP17L11C9JVI0 530 aa5.88□□□□□ -1.47
RNU6-390P-201ENST00000516259 USP17L21D6R901 530 aa5.88□□□□□ -1.47
RNU6-390P-201ENST00000516259 USP17L18D6R9N7 530 aa5.88□□□□□ -1.47
RNU6-390P-201ENST00000516259 USP17L22D6RA61 530 aa5.88□□□□□ -1.47
RNU6-390P-201ENST00000516259 USP17L17D6RBQ6 530 aa5.88□□□□□ -1.47
RNU6-390P-201ENST00000516259 USP17L19D6RCP7 530 aa5.88□□□□□ -1.47
RNU6-390P-201ENST00000516259 USP17L20D6RJB6 530 aa5.88□□□□□ -1.47
RNU6-390P-201ENST00000516259 VARSP26640 1264 aaKnown RBP5.88□□□□□ -1.47
RNU6-390P-201ENST00000516259 USP17L24Q0WX57 530 aa5.88□□□□□ -1.47
RNU6-390P-201ENST00000516259 NCOA4Q13772 614 aa5.88□□□□□ -1.47
RNU6-390P-201ENST00000516259 IFFO2Q5TF58 517 aa5.88□□□□□ -1.47
RNU6-390P-201ENST00000516259 SIX5Q8N196 739 aa5.88□□□□□ -1.47
RNU6-390P-201ENST00000516259 CLP1Q92989 425 aaKnown RBP5.88□□□□□ -1.47
RNU6-390P-201ENST00000516259 SLC10A4Q96EP9 437 aa5.88□□□□□ -1.47
RNU6-390P-201ENST00000516259 NOVA2Q9UNW9 492 aaKnown RBP5.88□□□□□ -1.47
RNU6-390P-201ENST00000516259 NOD1Q9Y239 953 aa5.88□□□□□ -1.47
RNU6-390P-201ENST00000516259 RASA1P20936 1047 aa5.87□□□□□ -1.47
RNU6-390P-201ENST00000516259 SH3BP2P78314 561 aa5.87□□□□□ -1.47
RNU6-390P-201ENST00000516259 USP4Q13107 963 aa5.87□□□□□ -1.47
RNU6-390P-201ENST00000516259 C4orf48Q5BLP8 95 aa5.87□□□□□ -1.47
RNU6-390P-201ENST00000516259 TMEM164Q5U3C3 297 aa5.87□□□□□ -1.47
RNU6-390P-201ENST00000516259 ANKMY2Q8IV38 441 aa5.87□□□□□ -1.47
RNU6-390P-201ENST00000516259 C1orf216Q8TAB5 229 aa5.87□□□□□ -1.47
RNU6-390P-201ENST00000516259 NKX2-3Q8TAU0 364 aa5.87□□□□□ -1.47
RNU6-390P-201ENST00000516259 ZBTB24O43167 697 aaPredicted RBP5.86□□□□□ -1.47
RNU6-390P-201ENST00000516259 FAM69CQ0P6D2 419 aa5.86□□□□□ -1.47
RNU6-390P-201ENST00000516259 CRTC2Q53ET0 693 aaPredicted RBP5.86□□□□□ -1.47
RNU6-390P-201ENST00000516259 FAM200AQ8TCP9 573 aa5.86□□□□□ -1.47
RNU6-390P-201ENST00000516259 FOXJ1Q92949 421 aa5.86□□□□□ -1.47
RNU6-390P-201ENST00000516259 DOLKQ9UPQ8 538 aa5.86□□□□□ -1.47
RNU6-390P-201ENST00000516259 MAGEB6P1A0A0J9YX57 407 aa5.85□□□□□ -1.47
RNU6-390P-201ENST00000516259 RNF223E7ERA6 249 aa5.85□□□□□ -1.47
RNU6-390P-201ENST00000516259 M0R2N6 131 aa5.85□□□□□ -1.47
RNU6-390P-201ENST00000516259 GIGYF1O75420 1035 aaPredicted RBP5.85□□□□□ -1.47
RNU6-390P-201ENST00000516259 DKK1O94907 266 aa5.85□□□□□ -1.47
RNU6-390P-201ENST00000516259 SSFA2P28290 1259 aa5.85□□□□□ -1.47
RNU6-390P-201ENST00000516259 TRIM32Q13049 653 aa5.85□□□□□ -1.47
RNU6-390P-201ENST00000516259 TMCO4Q5TGY1 634 aa5.85□□□□□ -1.47
RNU6-390P-201ENST00000516259 OGFOD1Q8N543 542 aa5.85□□□□□ -1.47
RNU6-390P-201ENST00000516259 CCDC85AQ96PX6 553 aaPredicted RBP5.85□□□□□ -1.47
RNU6-390P-201ENST00000516259 CDK15Q96Q40 435 aa5.85□□□□□ -1.47
RNU6-390P-201ENST00000516259 DNAAF2Q9NVR5 837 aaKnown RBP5.85□□□□□ -1.47
RNU6-390P-201ENST00000516259 ZBTB7BO15156 539 aaPredicted RBP5.84□□□□□ -1.47
RNU6-390P-201ENST00000516259 CLDN10P78369 228 aa5.84□□□□□ -1.47
RNU6-390P-201ENST00000516259 AGERQ15109 404 aa5.84□□□□□ -1.47
RNU6-390P-201ENST00000516259 CDCA8Q53HL2 280 aa5.84□□□□□ -1.47
RNU6-390P-201ENST00000516259 TXNDC2Q86VQ3 553 aa5.84□□□□□ -1.47
RNU6-390P-201ENST00000516259 DEPDC4Q8N2C3 294 aa5.84□□□□□ -1.47
RNU6-390P-201ENST00000516259 CD2BP2O95400 341 aaKnown RBP5.83□□□□□ -1.48
RNU6-390P-201ENST00000516259 ARID4AP29374 1257 aaPredicted RBP5.83□□□□□ -1.48
RNU6-390P-201ENST00000516259 CCER1Q8TC90 406 aaPredicted RBP5.83□□□□□ -1.48
RNU6-390P-201ENST00000516259 STK32AQ8WU08 396 aa5.83□□□□□ -1.48
RNU6-390P-201ENST00000516259 RNF166Q96A37 237 aaPredicted RBP5.83□□□□□ -1.48
RNU6-390P-201ENST00000516259 CARD14Q9BXL6 1004 aa5.83□□□□□ -1.48
RNU6-390P-201ENST00000516259 GZF1Q9H116 711 aaPredicted RBP5.83□□□□□ -1.48
RNU6-390P-201ENST00000516259 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.83□□□□□ -1.48
RNU6-390P-201ENST00000516259 PCDHGA11Q9Y5H2 935 aa5.83□□□□□ -1.48
RNU6-390P-201ENST00000516259 WASLO00401 505 aaPredicted RBP5.82□□□□□ -1.48
RNU6-390P-201ENST00000516259 SEC13P55735 322 aa5.82□□□□□ -1.48
RNU6-390P-201ENST00000516259 GTF2IP78347 998 aa5.82□□□□□ -1.48
RNU6-390P-201ENST00000516259 DHX9Q08211 1270 aaKnown RBP5.82□□□□□ -1.48
RNU6-390P-201ENST00000516259 LINC01559Q495D7 138 aa5.82□□□□□ -1.48
RNU6-390P-201ENST00000516259 PHLDB3Q6NSJ2 640 aa5.82□□□□□ -1.48
RNU6-390P-201ENST00000516259 SND1Q7KZF4 910 aaKnown RBP eCLIP5.82□□□□□ -1.48
RNU6-390P-201ENST00000516259 KCTD15Q96SI1 283 aaPredicted RBP5.82□□□□□ -1.48
RNU6-390P-201ENST00000516259 SKOR1P84550 965 aa5.81□□□□□ -1.48
RNU6-390P-201ENST00000516259 DPYDQ12882 1025 aa5.81□□□□□ -1.48
RNU6-390P-201ENST00000516259 TSGA10IPQ3SY00 556 aa5.81□□□□□ -1.48
RNU6-390P-201ENST00000516259 RBM19Q9Y4C8 960 aaKnown RBP5.81□□□□□ -1.48
RNU6-390P-201ENST00000516259 MYCP01106 439 aaPredicted RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms