RNA–Protein interactions for RNA: ENST00000515748.2

CSNK1A1-206, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-206ENST00000515748 ADGRB1O14514 1584 aa13.49□□□□□ -0.25
CSNK1A1-206ENST00000515748 SLC16A10Q8TF71 515 aa13.49□□□□□ -0.25
CSNK1A1-206ENST00000515748 SIN3AQ96ST3 1273 aa13.49□□□□□ -0.25
CSNK1A1-206ENST00000515748 PEAK1Q9H792 1746 aa13.48□□□□□ -0.25
CSNK1A1-206ENST00000515748 JMYQ8N9B5 988 aa13.48□□□□□ -0.25
CSNK1A1-206ENST00000515748 L3MBTL2Q969R5 705 aa13.47□□□□□ -0.25
CSNK1A1-206ENST00000515748 POGKQ9P215 609 aa13.47□□□□□ -0.25
CSNK1A1-206ENST00000515748 ATP7BP35670 1465 aa13.47□□□□□ -0.25
CSNK1A1-206ENST00000515748 SBF2Q86WG5 1849 aa13.46□□□□□ -0.25
CSNK1A1-206ENST00000515748 PRR36Q9H6K5 1346 aa13.46□□□□□ -0.25
CSNK1A1-206ENST00000515748 KLRG1Q96E93 195 aa13.46□□□□□ -0.25
CSNK1A1-206ENST00000515748 ADCY9O60503 1353 aa13.45□□□□□ -0.26
CSNK1A1-206ENST00000515748 CRYBG1Q9Y4K1 1723 aa13.45□□□□□ -0.26
CSNK1A1-206ENST00000515748 ZNF827Q17R98 1081 aa13.45□□□□□ -0.26
CSNK1A1-206ENST00000515748 HIRIP3Q9BW71 556 aaPredicted RBP13.45□□□□□ -0.26
CSNK1A1-206ENST00000515748 BCL9O00512 1426 aa13.45□□□□□ -0.26
CSNK1A1-206ENST00000515748 AATKQ6ZMQ8 1374 aa13.45□□□□□ -0.26
CSNK1A1-206ENST00000515748 KNDC1Q76NI1 1749 aa13.44□□□□□ -0.26
CSNK1A1-206ENST00000515748 PARP4Q9UKK3 1724 aaKnown RBP13.44□□□□□ -0.26
CSNK1A1-206ENST00000515748 KIAA1210Q9ULL0 1709 aa13.44□□□□□ -0.26
CSNK1A1-206ENST00000515748 CFAP70Q5T0N1 1121 aa13.44□□□□□ -0.26
CSNK1A1-206ENST00000515748 WWC3Q9ULE0 1092 aa13.44□□□□□ -0.26
CSNK1A1-206ENST00000515748 TONSLQ96HA7 1378 aa13.44□□□□□ -0.26
CSNK1A1-206ENST00000515748 TOMM70O94826 608 aa13.43□□□□□ -0.26
CSNK1A1-206ENST00000515748 NEUROD1Q13562 356 aa13.43□□□□□ -0.26
CSNK1A1-206ENST00000515748 TIMELESSQ9UNS1 1208 aa13.43□□□□□ -0.26
CSNK1A1-206ENST00000515748 KDM2AQ9Y2K7 1162 aa13.43□□□□□ -0.26
CSNK1A1-206ENST00000515748 CPDO75976 1380 aa13.43□□□□□ -0.26
CSNK1A1-206ENST00000515748 CRB1P82279 1406 aa13.42□□□□□ -0.26
CSNK1A1-206ENST00000515748 HTRA3P83110 453 aa13.41□□□□□ -0.26
CSNK1A1-206ENST00000515748 AKT1S1Q96B36 256 aa13.41□□□□□ -0.26
CSNK1A1-206ENST00000515748 CDCA7Q9BWT1 371 aaPredicted RBP13.41□□□□□ -0.26
CSNK1A1-206ENST00000515748 LRRC4BQ9NT99 713 aa13.41□□□□□ -0.26
CSNK1A1-206ENST00000515748 WASLO00401 505 aaPredicted RBP13.4□□□□□ -0.26
CSNK1A1-206ENST00000515748 GCP02774 474 aa13.4□□□□□ -0.26
CSNK1A1-206ENST00000515748 TOM1L2Q6ZVM7 507 aa13.4□□□□□ -0.26
CSNK1A1-206ENST00000515748 PCNTO95613 3336 aa13.39□□□□□ -0.27
CSNK1A1-206ENST00000515748 EXOC5O00471 708 aa13.39□□□□□ -0.27
CSNK1A1-206ENST00000515748 ABTB2Q8N961 1025 aa13.39□□□□□ -0.27
CSNK1A1-206ENST00000515748 MINK1Q8N4C8 1332 aaPredicted RBP13.39□□□□□ -0.27
CSNK1A1-206ENST00000515748 COL5A2P05997 1499 aaPredicted RBP13.38□□□□□ -0.27
CSNK1A1-206ENST00000515748 EIF3AQ14152 1382 aaKnown RBP13.38□□□□□ -0.27
CSNK1A1-206ENST00000515748 PNPLA7Q6ZV29 1317 aa13.38□□□□□ -0.27
CSNK1A1-206ENST00000515748 ACSBG1Q96GR2 724 aa13.37□□□□□ -0.27
CSNK1A1-206ENST00000515748 TFCP2L1Q9NZI6 479 aa13.37□□□□□ -0.27
CSNK1A1-206ENST00000515748 TRPM1Q7Z4N2 1603 aa13.36□□□□□ -0.27
CSNK1A1-206ENST00000515748 ZBTB7CA1YPR0 619 aa13.36□□□□□ -0.27
CSNK1A1-206ENST00000515748 CCER1Q8TC90 406 aaPredicted RBP13.36□□□□□ -0.27
CSNK1A1-206ENST00000515748 NUDT16Q96DE0 195 aaKnown RBP13.36□□□□□ -0.27
CSNK1A1-206ENST00000515748 LMO7Q8WWI1 1683 aa13.36□□□□□ -0.27
CSNK1A1-206ENST00000515748 PHRF1Q9P1Y6 1649 aaKnown RBP13.35□□□□□ -0.27
CSNK1A1-206ENST00000515748 NLRP13Q86W25 1043 aa13.35□□□□□ -0.27
CSNK1A1-206ENST00000515748 CD2APQ9Y5K6 639 aa13.35□□□□□ -0.27
CSNK1A1-206ENST00000515748 USP19O94966 1318 aa13.35□□□□□ -0.27
CSNK1A1-206ENST00000515748 NBPF1Q3BBV0 1214 aa13.34□□□□□ -0.27
CSNK1A1-206ENST00000515748 LRRC37A3O60309 1634 aa13.34□□□□□ -0.27
CSNK1A1-206ENST00000515748 ROCK2O75116 1388 aaKnown RBP13.33□□□□□ -0.27
CSNK1A1-206ENST00000515748 TRAK1Q9UPV9 953 aa13.33□□□□□ -0.28
CSNK1A1-206ENST00000515748 RBM46Q8TBY0 533 aaKnown RBP13.32□□□□□ -0.28
CSNK1A1-206ENST00000515748 AXIN2Q9Y2T1 843 aa13.32□□□□□ -0.28
CSNK1A1-206ENST00000515748 ARHGEF28Q8N1W1 1705 aaKnown RBP13.32□□□□□ -0.28
CSNK1A1-206ENST00000515748 TULP4Q9NRJ4 1543 aa13.32□□□□□ -0.28
CSNK1A1-206ENST00000515748 ACEP12821 1306 aa13.32□□□□□ -0.28
CSNK1A1-206ENST00000515748 PAPPAQ13219 1627 aa13.31□□□□□ -0.28
CSNK1A1-206ENST00000515748 HSPA1AP0DMV8 641 aaKnown RBP13.31□□□□□ -0.28
CSNK1A1-206ENST00000515748 HSPA1BP0DMV9 641 aaKnown RBP13.31□□□□□ -0.28
CSNK1A1-206ENST00000515748 SLC27A3Q5K4L6 730 aa13.31□□□□□ -0.28
CSNK1A1-206ENST00000515748 CARD10Q9BWT7 1032 aa13.31□□□□□ -0.28
CSNK1A1-206ENST00000515748 WDR17Q8IZU2 1322 aa13.31□□□□□ -0.28
CSNK1A1-206ENST00000515748 COL24A1Q17RW2 1714 aa13.3□□□□□ -0.28
CSNK1A1-206ENST00000515748 MSH5O43196 834 aa13.3□□□□□ -0.28
CSNK1A1-206ENST00000515748 NMRK2Q9NPI5 230 aa13.3□□□□□ -0.28
CSNK1A1-206ENST00000515748 USP6P35125 1406 aa13.3□□□□□ -0.28
CSNK1A1-206ENST00000515748 KCNQ4P56696 695 aa13.29□□□□□ -0.28
CSNK1A1-206ENST00000515748 BRD4O60885 1362 aaPredicted RBP13.29□□□□□ -0.28
CSNK1A1-206ENST00000515748 TOPAZ1Q8N9V7 1692 aa13.28□□□□□ -0.28
CSNK1A1-206ENST00000515748 FSTL1Q12841 308 aa13.28□□□□□ -0.28
CSNK1A1-206ENST00000515748 COL23A1Q86Y22 540 aaPredicted RBP13.28□□□□□ -0.28
CSNK1A1-206ENST00000515748 SBNO2Q9Y2G9 1366 aa13.28□□□□□ -0.28
CSNK1A1-206ENST00000515748 WDR90Q96KV7 1748 aa13.27□□□□□ -0.28
CSNK1A1-206ENST00000515748 PLEKHG3A1L390 1219 aa13.27□□□□□ -0.29
CSNK1A1-206ENST00000515748 MSL1Q68DK7 614 aa13.27□□□□□ -0.29
CSNK1A1-206ENST00000515748 CENPJQ9HC77 1338 aaPredicted RBP13.27□□□□□ -0.29
CSNK1A1-206ENST00000515748 POLR3AO14802 1390 aaPredicted RBP13.27□□□□□ -0.29
CSNK1A1-206ENST00000515748 CSB-PGBD3P0DP91 1061 aa13.26□□□□□ -0.29
CSNK1A1-206ENST00000515748 C16orf71Q8IYS4 520 aaPredicted RBP13.26□□□□□ -0.29
CSNK1A1-206ENST00000515748 CDK19Q9BWU1 502 aa13.26□□□□□ -0.29
CSNK1A1-206ENST00000515748 CCDC61Q9Y6R9 512 aa13.26□□□□□ -0.29
CSNK1A1-206ENST00000515748 CARD11Q9BXL7 1154 aa13.25□□□□□ -0.29
CSNK1A1-206ENST00000515748 AKAP12Q02952 1782 aa13.25□□□□□ -0.29
CSNK1A1-206ENST00000515748 IGSF1Q8N6C5 1336 aa13.24□□□□□ -0.29
CSNK1A1-206ENST00000515748 NLRP6P59044 892 aa13.24□□□□□ -0.29
CSNK1A1-206ENST00000515748 FAM161AQ3B820 660 aa13.23□□□□□ -0.29
CSNK1A1-206ENST00000515748 NHSQ6T4R5 1651 aa13.21□□□□□ -0.29
CSNK1A1-206ENST00000515748 QSER1Q2KHR3 1735 aa13.21□□□□□ -0.3
CSNK1A1-206ENST00000515748 QRICH2Q9H0J4 1663 aa13.21□□□□□ -0.3
CSNK1A1-206ENST00000515748 ARHGEF25Q86VW2 580 aa13.2□□□□□ -0.3
CSNK1A1-206ENST00000515748 TNS2Q63HR2 1409 aa13.2□□□□□ -0.3
CSNK1A1-206ENST00000515748 USP47Q96K76 1375 aa13.2□□□□□ -0.3
CSNK1A1-206ENST00000515748 KAT6BQ8WYB5 2073 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms