RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 NUTM2BA6NNL0 878 aaPredicted RBP11.74□□□□□ -0.53
SFXN1-211ENST00000515736 NUTM2EB1AL46 878 aaPredicted RBP11.74□□□□□ -0.53
SFXN1-211ENST00000515736 ITGAEP38570 1179 aa11.74□□□□□ -0.53
SFXN1-211ENST00000515736 PPP4R3BQ5MIZ7 849 aa11.74□□□□□ -0.53
SFXN1-211ENST00000515736 NUTM2DQ5VT03 806 aaPredicted RBP11.74□□□□□ -0.53
SFXN1-211ENST00000515736 NUTM2AQ8IVF1 878 aaPredicted RBP11.74□□□□□ -0.53
SFXN1-211ENST00000515736 PNMA3Q9UL41 463 aa11.74□□□□□ -0.53
SFXN1-211ENST00000515736 RIMBP2O15034 1052 aa11.73□□□□□ -0.53
SFXN1-211ENST00000515736 AGLP35573 1532 aa11.73□□□□□ -0.53
SFXN1-211ENST00000515736 CABLES1Q8TDN4 633 aa11.73□□□□□ -0.53
SFXN1-211ENST00000515736 TRIM6-TRIM34B2RNG4 842 aa11.72□□□□□ -0.53
SFXN1-211ENST00000515736 KDM4AO75164 1064 aa11.72□□□□□ -0.53
SFXN1-211ENST00000515736 GJD4Q96KN9 370 aaPredicted RBP11.72□□□□□ -0.53
SFXN1-211ENST00000515736 SAMD9LQ8IVG5 1584 aa11.71□□□□□ -0.53
SFXN1-211ENST00000515736 SYCP2Q9BX26 1530 aa11.71□□□□□ -0.53
SFXN1-211ENST00000515736 PTPRKQ15262 1439 aa11.71□□□□□ -0.53
SFXN1-211ENST00000515736 PSDA5PKW4 1024 aaPredicted RBP11.71□□□□□ -0.53
SFXN1-211ENST00000515736 PTPREP23469 700 aa11.71□□□□□ -0.53
SFXN1-211ENST00000515736 PACS2Q86VP3 889 aa11.71□□□□□ -0.53
SFXN1-211ENST00000515736 DAPK1P53355 1430 aa11.7□□□□□ -0.54
SFXN1-211ENST00000515736 RDH13Q8NBN7 331 aa11.7□□□□□ -0.54
SFXN1-211ENST00000515736 ZBTB3Q9H5J0 574 aa11.7□□□□□ -0.54
SFXN1-211ENST00000515736 NDUFB9Q9Y6M9 179 aa11.7□□□□□ -0.54
SFXN1-211ENST00000515736 SHANK2Q9UPX8 1470 aa11.7□□□□□ -0.54
SFXN1-211ENST00000515736 CNTLNQ9NXG0 1405 aa11.69□□□□□ -0.54
SFXN1-211ENST00000515736 MROH2AA6NES4 1674 aa11.69□□□□□ -0.54
SFXN1-211ENST00000515736 USP46P62068 366 aa11.69□□□□□ -0.54
SFXN1-211ENST00000515736 PDE4CQ08493 712 aa11.69□□□□□ -0.54
SFXN1-211ENST00000515736 ADGRL2O95490 1459 aa11.69□□□□□ -0.54
SFXN1-211ENST00000515736 CLTCQ00610 1675 aaKnown RBP11.68□□□□□ -0.54
SFXN1-211ENST00000515736 SPAG9O60271 1321 aaKnown RBP11.68□□□□□ -0.54
SFXN1-211ENST00000515736 HOXA2O43364 376 aa11.68□□□□□ -0.54
SFXN1-211ENST00000515736 ARHGEF5Q12774 1597 aa11.67□□□□□ -0.54
SFXN1-211ENST00000515736 ATP7AQ04656 1500 aa11.67□□□□□ -0.54
SFXN1-211ENST00000515736 GPATCH8Q9UKJ3 1502 aaKnown RBP11.67□□□□□ -0.54
SFXN1-211ENST00000515736 GCGRP47871 477 aa11.67□□□□□ -0.54
SFXN1-211ENST00000515736 HNRNPMP52272 730 aaKnown RBP eCLIP11.67□□□□□ -0.54
SFXN1-211ENST00000515736 HDGFL1Q5TGJ6 251 aa11.67□□□□□ -0.54
SFXN1-211ENST00000515736 ADAMTS19Q8TE59 1207 aa11.67□□□□□ -0.54
SFXN1-211ENST00000515736 CAMSAP2Q08AD1 1489 aa11.67□□□□□ -0.54
SFXN1-211ENST00000515736 FDX1P10109 184 aa11.66□□□□□ -0.54
SFXN1-211ENST00000515736 WASHC4Q2M389 1173 aa11.66□□□□□ -0.54
SFXN1-211ENST00000515736 PBXIP1Q96AQ6 731 aa11.66□□□□□ -0.54
SFXN1-211ENST00000515736 PTPRTO14522 1441 aa11.66□□□□□ -0.54
SFXN1-211ENST00000515736 INO80Q9ULG1 1556 aaPredicted RBP11.66□□□□□ -0.54
SFXN1-211ENST00000515736 PLEKHH2Q8IVE3 1493 aa11.65□□□□□ -0.54
SFXN1-211ENST00000515736 SMAPO00193 183 aa11.65□□□□□ -0.54
SFXN1-211ENST00000515736 CFDP1Q9UEE9 299 aaPredicted RBP11.65□□□□□ -0.54
SFXN1-211ENST00000515736 CAMSAP1Q5T5Y3 1602 aa11.64□□□□□ -0.55
SFXN1-211ENST00000515736 ABCC5O15440 1437 aa11.64□□□□□ -0.55
SFXN1-211ENST00000515736 GPR37L1O60883 481 aa11.64□□□□□ -0.55
SFXN1-211ENST00000515736 TRIM34Q9BYJ4 488 aa11.64□□□□□ -0.55
SFXN1-211ENST00000515736 GZF1Q9H116 711 aaPredicted RBP11.64□□□□□ -0.55
SFXN1-211ENST00000515736 HMX1Q9NP08 348 aaPredicted RBP11.64□□□□□ -0.55
SFXN1-211ENST00000515736 PCDHGC3Q9UN70 934 aa11.64□□□□□ -0.55
SFXN1-211ENST00000515736 MYO3AQ8NEV4 1616 aa11.64□□□□□ -0.55
SFXN1-211ENST00000515736 NPATQ14207 1427 aa11.63□□□□□ -0.55
SFXN1-211ENST00000515736 NCOA1Q15788 1441 aa11.63□□□□□ -0.55
SFXN1-211ENST00000515736 CTDSPL2Q05D32 466 aa11.63□□□□□ -0.55
SFXN1-211ENST00000515736 TMCO4Q5TGY1 634 aa11.63□□□□□ -0.55
SFXN1-211ENST00000515736 DISP3Q9P2K9 1392 aa11.63□□□□□ -0.55
SFXN1-211ENST00000515736 A2MP01023 1474 aa11.63□□□□□ -0.55
SFXN1-211ENST00000515736 KIAA1107Q9UPP5 1409 aa11.62□□□□□ -0.55
SFXN1-211ENST00000515736 PROX2Q3B8N5 592 aa11.62□□□□□ -0.55
SFXN1-211ENST00000515736 RSPH4AQ5TD94 716 aa11.62□□□□□ -0.55
SFXN1-211ENST00000515736 ZMYM3Q14202 1370 aa11.62□□□□□ -0.55
SFXN1-211ENST00000515736 PLXNC1O60486 1568 aa11.62□□□□□ -0.55
SFXN1-211ENST00000515736 ZNF142P52746 1687 aaPredicted RBP11.62□□□□□ -0.55
SFXN1-211ENST00000515736 SRPK2P78362 688 aaKnown RBP11.61□□□□□ -0.55
SFXN1-211ENST00000515736 CFAP70Q5T0N1 1121 aa11.61□□□□□ -0.55
SFXN1-211ENST00000515736 GGT6Q6P531 493 aa11.61□□□□□ -0.55
SFXN1-211ENST00000515736 RGS22Q8NE09 1264 aa11.61□□□□□ -0.55
SFXN1-211ENST00000515736 LTBP4Q8N2S1 1624 aa11.6□□□□□ -0.55
SFXN1-211ENST00000515736 MAST1Q9Y2H9 1570 aa11.6□□□□□ -0.55
SFXN1-211ENST00000515736 TONSLQ96HA7 1378 aa11.6□□□□□ -0.55
SFXN1-211ENST00000515736 POTEJP0CG39 1038 aa11.6□□□□□ -0.55
SFXN1-211ENST00000515736 GUCA2AQ02747 115 aa11.6□□□□□ -0.55
SFXN1-211ENST00000515736 CEP170BQ9Y4F5 1589 aaPredicted RBP11.59□□□□□ -0.55
SFXN1-211ENST00000515736 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.59□□□□□ -0.55
SFXN1-211ENST00000515736 CENPBP07199 599 aaPredicted RBP11.59□□□□□ -0.55
SFXN1-211ENST00000515736 SLC10A3P09131 477 aa11.59□□□□□ -0.55
SFXN1-211ENST00000515736 RFX1P22670 979 aa11.59□□□□□ -0.55
SFXN1-211ENST00000515736 MTMR2Q13614 643 aa11.59□□□□□ -0.55
SFXN1-211ENST00000515736 HLA-CQ95604 372 aa11.59□□□□□ -0.55
SFXN1-211ENST00000515736 USTQ9Y2C2 406 aa11.59□□□□□ -0.55
SFXN1-211ENST00000515736 SPATA31D1Q6ZQQ2 1576 aa11.58□□□□□ -0.55
SFXN1-211ENST00000515736 ANKRD30AQ9BXX3 1397 aa11.58□□□□□ -0.56
SFXN1-211ENST00000515736 VAC14Q08AM6 782 aa11.58□□□□□ -0.56
SFXN1-211ENST00000515736 HELBQ8NG08 1087 aaPredicted RBP11.58□□□□□ -0.56
SFXN1-211ENST00000515736 PPP1R12CQ9BZL4 782 aa11.58□□□□□ -0.56
SFXN1-211ENST00000515736 KDM5DQ9BY66 1539 aa11.58□□□□□ -0.56
SFXN1-211ENST00000515736 ZNF644Q9H582 1327 aaPredicted RBP11.58□□□□□ -0.56
SFXN1-211ENST00000515736 PATL2C9JE40 543 aaKnown RBP11.57□□□□□ -0.56
SFXN1-211ENST00000515736 MFAP1P55081 439 aaKnown RBP11.57□□□□□ -0.56
SFXN1-211ENST00000515736 IQSEC2Q5JU85 1478 aa11.57□□□□□ -0.56
SFXN1-211ENST00000515736 LRRN4Q8WUT4 740 aa11.56□□□□□ -0.56
SFXN1-211ENST00000515736 ALG2Q9H553 416 aa11.56□□□□□ -0.56
SFXN1-211ENST00000515736 KIAA1468Q9P260 1216 aa11.56□□□□□ -0.56
SFXN1-211ENST00000515736 BRD1O95696 1058 aa11.55□□□□□ -0.56
SFXN1-211ENST00000515736 SWT1Q5T5J6 900 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms