RNA–Protein interactions for RNA: ENST00000515707.1

ABCC3-217, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3 BASIC

Gene ABCC3, Length 656 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-217ENST00000515707 WNK3Q9BYP7 1800 aa28.22■■■□□ 2.11
ABCC3-217ENST00000515707 LARP1Q6PKG0 1096 aaKnown RBP28.22■■■□□ 2.11
ABCC3-217ENST00000515707 ARHGEF25Q86VW2 580 aa28.22■■■□□ 2.11
ABCC3-217ENST00000515707 KIF20BQ96Q89 1820 aa28.22■■■□□ 2.11
ABCC3-217ENST00000515707 CRB1P82279 1406 aa28.21■■■□□ 2.11
ABCC3-217ENST00000515707 KRT27Q7Z3Y8 459 aa28.21■■■□□ 2.11
ABCC3-217ENST00000515707 PARP4Q9UKK3 1724 aaKnown RBP28.19■■■□□ 2.1
ABCC3-217ENST00000515707 EIF4G2P78344 907 aaKnown RBP eCLIP28.18■■■□□ 2.1
ABCC3-217ENST00000515707 USP35Q9P2H5 1018 aa28.17■■■□□ 2.1
ABCC3-217ENST00000515707 BLMP54132 1417 aaPredicted RBP28.17■■■□□ 2.1
ABCC3-217ENST00000515707 BARGINQ6ZT62 677 aa28.16■■■□□ 2.1
ABCC3-217ENST00000515707 TCP11L2Q8N4U5 519 aa28.15■■■□□ 2.1
ABCC3-217ENST00000515707 AXIN2Q9Y2T1 843 aa28.15■■■□□ 2.1
ABCC3-217ENST00000515707 WDR17Q8IZU2 1322 aa28.15■■■□□ 2.1
ABCC3-217ENST00000515707 CCDC125Q86Z20 511 aa28.14■■■□□ 2.1
ABCC3-217ENST00000515707 THRAP3Q9Y2W1 955 aaKnown RBP28.14■■■□□ 2.1
ABCC3-217ENST00000515707 HSPA5P11021 654 aaKnown RBP28.13■■■□□ 2.09
ABCC3-217ENST00000515707 LRRC37A3O60309 1634 aa28.13■■■□□ 2.09
ABCC3-217ENST00000515707 RGPD1P0DJD0 1748 aa28.12■■■□□ 2.09
ABCC3-217ENST00000515707 TOM1L2Q6ZVM7 507 aa28.09■■■□□ 2.09
ABCC3-217ENST00000515707 COG3Q96JB2 828 aa28.09■■■□□ 2.09
ABCC3-217ENST00000515707 FAM208AQ9UK61 1670 aaKnown RBP28.09■■■□□ 2.09
ABCC3-217ENST00000515707 TNS1Q9HBL0 1735 aaKnown RBP28.08■■■□□ 2.09
ABCC3-217ENST00000515707 NSD3Q9BZ95 1437 aa28.08■■■□□ 2.09
ABCC3-217ENST00000515707 ERBB3P21860 1342 aa28.05■■■□□ 2.08
ABCC3-217ENST00000515707 CSB-PGBD3P0DP91 1061 aa28.04■■■□□ 2.08
ABCC3-217ENST00000515707 FYB1O15117 783 aa28.03■■■□□ 2.08
ABCC3-217ENST00000515707 FAM182BQ5T319 152 aa28.03■■■□□ 2.08
ABCC3-217ENST00000515707 CARD10Q9BWT7 1032 aa28.02■■■□□ 2.08
ABCC3-217ENST00000515707 CARD14Q9BXL6 1004 aa28.02■■■□□ 2.08
ABCC3-217ENST00000515707 DISP2A7MBM2 1401 aa28.01■■■□□ 2.08
ABCC3-217ENST00000515707 PEAK1Q9H792 1746 aa28.01■■■□□ 2.07
ABCC3-217ENST00000515707 ANKRD26Q9UPS8 1709 aa28.01■■■□□ 2.07
ABCC3-217ENST00000515707 CCDC7Q96M83 1385 aa28.01■■■□□ 2.07
ABCC3-217ENST00000515707 SF3B2Q13435 895 aaKnown RBP28.01■■■□□ 2.07
ABCC3-217ENST00000515707 GGNBP2Q9H3C7 697 aa28.01■■■□□ 2.07
ABCC3-217ENST00000515707 PDE3BQ13370 1112 aa28■■■□□ 2.07
ABCC3-217ENST00000515707 POLR3GLQ9BT43 218 aa28■■■□□ 2.07
ABCC3-217ENST00000515707 RTL1A6NKG5 1358 aa27.99■■■□□ 2.07
ABCC3-217ENST00000515707 MAP3K19Q56UN5 1328 aa27.99■■■□□ 2.07
ABCC3-217ENST00000515707 FAM196AQ6ZSG2 479 aa27.97■■■□□ 2.07
ABCC3-217ENST00000515707 ANKRD24Q8TF21 1146 aa27.97■■■□□ 2.07
ABCC3-217ENST00000515707 CDCA7Q9BWT1 371 aaPredicted RBP27.97■■■□□ 2.07
ABCC3-217ENST00000515707 IP6K1Q92551 441 aa27.96■■■□□ 2.07
ABCC3-217ENST00000515707 OVOS2A0A0G2JMS6 1433 aa27.95■■■□□ 2.07
ABCC3-217ENST00000515707 CGNL1Q0VF96 1302 aa27.93■■■□□ 2.06
ABCC3-217ENST00000515707 TNS2Q63HR2 1409 aa27.93■■■□□ 2.06
ABCC3-217ENST00000515707 SBF2Q86WG5 1849 aa27.93■■■□□ 2.06
ABCC3-217ENST00000515707 DDB1Q16531 1140 aa27.93■■■□□ 2.06
ABCC3-217ENST00000515707 DEFB132Q7Z7B7 95 aa27.93■■■□□ 2.06
ABCC3-217ENST00000515707 NLRP2Q9NX02 1062 aa27.93■■■□□ 2.06
ABCC3-217ENST00000515707 RGPD2P0DJD1 1756 aa27.92■■■□□ 2.06
ABCC3-217ENST00000515707 FBLN1P23142 703 aa27.92■■■□□ 2.06
ABCC3-217ENST00000515707 HOXC9P31274 260 aa27.92■■■□□ 2.06
ABCC3-217ENST00000515707 AMPHP49418 695 aa27.91■■■□□ 2.06
ABCC3-217ENST00000515707 BAG6P46379 1132 aa27.9■■■□□ 2.06
ABCC3-217ENST00000515707 RRS1Q15050 365 aaKnown RBP27.9■■■□□ 2.06
ABCC3-217ENST00000515707 KIF24Q5T7B8 1368 aa27.89■■■□□ 2.06
ABCC3-217ENST00000515707 C11orf95C9JLR9 678 aaPredicted RBP27.89■■■□□ 2.06
ABCC3-217ENST00000515707 TRIM37O94972 964 aa27.87■■■□□ 2.05
ABCC3-217ENST00000515707 FLT4P35916 1363 aa27.86■■■□□ 2.05
ABCC3-217ENST00000515707 SMG6Q86US8 1419 aaKnown RBP27.86■■■□□ 2.05
ABCC3-217ENST00000515707 LTV1Q96GA3 475 aaPredicted RBP27.86■■■□□ 2.05
ABCC3-217ENST00000515707 MAP2P11137 1827 aaKnown RBP27.85■■■□□ 2.05
ABCC3-217ENST00000515707 BCL9O00512 1426 aa27.85■■■□□ 2.05
ABCC3-217ENST00000515707 KIF7Q2M1P5 1343 aa27.85■■■□□ 2.05
ABCC3-217ENST00000515707 PANK3Q9H999 370 aa27.84■■■□□ 2.05
ABCC3-217ENST00000515707 RREB1Q92766 1687 aa27.84■■■□□ 2.05
ABCC3-217ENST00000515707 INSRP06213 1382 aa27.84■■■□□ 2.05
ABCC3-217ENST00000515707 RGPD3A6NKT7 1758 aaPredicted RBP27.83■■■□□ 2.05
ABCC3-217ENST00000515707 RGPD4Q7Z3J3 1758 aa27.83■■■□□ 2.05
ABCC3-217ENST00000515707 IL2RBP14784 551 aa27.83■■■□□ 2.05
ABCC3-217ENST00000515707 NSD2O96028 1365 aa27.83■■■□□ 2.05
ABCC3-217ENST00000515707 MARCH10Q8NA82 808 aaPredicted RBP27.82■■■□□ 2.04
ABCC3-217ENST00000515707 EXOC5O00471 708 aa27.81■■■□□ 2.04
ABCC3-217ENST00000515707 PARD3Q8TEW0 1356 aa27.8■■■□□ 2.04
ABCC3-217ENST00000515707 NHSQ6T4R5 1651 aa27.79■■■□□ 2.04
ABCC3-217ENST00000515707 EN1Q05925 392 aaPredicted RBP27.79■■■□□ 2.04
ABCC3-217ENST00000515707 NUP188Q5SRE5 1749 aa27.78■■■□□ 2.04
ABCC3-217ENST00000515707 SHANK3Q9BYB0 1731 aa27.78■■■□□ 2.04
ABCC3-217ENST00000515707 EMILIN1Q9Y6C2 1016 aa27.78■■■□□ 2.04
ABCC3-217ENST00000515707 APBA3O96018 575 aa27.77■■■□□ 2.04
ABCC3-217ENST00000515707 HSP90AB2PQ58FF8 381 aa27.76■■■□□ 2.03
ABCC3-217ENST00000515707 MEGF6O75095 1541 aa27.76■■■□□ 2.03
ABCC3-217ENST00000515707 CAMKK2Q96RR4 588 aa27.73■■■□□ 2.03
ABCC3-217ENST00000515707 EZH2Q15910 746 aaKnown RBP27.72■■■□□ 2.03
ABCC3-217ENST00000515707 NBPF6Q5VWK0 638 aa27.72■■■□□ 2.03
ABCC3-217ENST00000515707 NBPF4Q96M43 638 aa27.72■■■□□ 2.03
ABCC3-217ENST00000515707 KNSTRNQ9Y448 316 aa27.71■■■□□ 2.03
ABCC3-217ENST00000515707 NCAPD2Q15021 1401 aa27.7■■■□□ 2.03
ABCC3-217ENST00000515707 PPM1GO15355 546 aaPredicted RBP27.7■■■□□ 2.02
ABCC3-217ENST00000515707 BCL11BQ9C0K0 894 aaPredicted RBP27.7■■■□□ 2.02
ABCC3-217ENST00000515707 POLKQ9UBT6 870 aa27.7■■■□□ 2.02
ABCC3-217ENST00000515707 WASHC2AQ641Q2 1341 aa27.69■■■□□ 2.02
ABCC3-217ENST00000515707 TNNT2P45379 298 aaPredicted RBP27.69■■■□□ 2.02
ABCC3-217ENST00000515707 DOT1LQ8TEK3 1739 aa27.68■■■□□ 2.02
ABCC3-217ENST00000515707 USHBP1Q8N6Y0 703 aa27.68■■■□□ 2.02
ABCC3-217ENST00000515707 SRCAPQ6ZRS2 3230 aa27.67■■■□□ 2.02
ABCC3-217ENST00000515707 PKD1L3Q7Z443 1732 aa27.67■■■□□ 2.02
ABCC3-217ENST00000515707 BTAF1O14981 1849 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms