RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 STK32BQ9NY57 414 aa15.45■□□□□ 0.06
CLDND1-231ENST00000515620 PLEKHG3A1L390 1219 aa15.44■□□□□ 0.06
CLDND1-231ENST00000515620 IFFO2Q5TF58 517 aa15.44■□□□□ 0.06
CLDND1-231ENST00000515620 TOM1L2Q6ZVM7 507 aa15.44■□□□□ 0.06
CLDND1-231ENST00000515620 WNK3Q9BYP7 1800 aa15.44■□□□□ 0.06
CLDND1-231ENST00000515620 MARCH10Q8NA82 808 aaPredicted RBP15.43■□□□□ 0.06
CLDND1-231ENST00000515620 AKAP12Q02952 1782 aa15.42■□□□□ 0.06
CLDND1-231ENST00000515620 AATKQ6ZMQ8 1374 aa15.42■□□□□ 0.06
CLDND1-231ENST00000515620 SLC15A2Q16348 729 aa15.42■□□□□ 0.06
CLDND1-231ENST00000515620 TXNRD1Q16881 649 aa15.42■□□□□ 0.06
CLDND1-231ENST00000515620 MTFR1LQ9H019 292 aa15.42■□□□□ 0.06
CLDND1-231ENST00000515620 CHD4Q14839 1912 aa15.42■□□□□ 0.06
CLDND1-231ENST00000515620 PPIP5K1Q6PFW1 1433 aa15.42■□□□□ 0.06
CLDND1-231ENST00000515620 BCL9O00512 1426 aa15.41■□□□□ 0.06
CLDND1-231ENST00000515620 SLIT3O75094 1523 aa15.4■□□□□ 0.06
CLDND1-231ENST00000515620 SGIP1Q9BQI5 828 aa15.4■□□□□ 0.06
CLDND1-231ENST00000515620 WDR17Q8IZU2 1322 aa15.39■□□□□ 0.05
CLDND1-231ENST00000515620 GIGYF1O75420 1035 aaPredicted RBP15.38■□□□□ 0.05
CLDND1-231ENST00000515620 NLRP6P59044 892 aa15.38■□□□□ 0.05
CLDND1-231ENST00000515620 SRPK2P78362 688 aaKnown RBP15.38■□□□□ 0.05
CLDND1-231ENST00000515620 ARXQ96QS3 562 aa15.38■□□□□ 0.05
CLDND1-231ENST00000515620 STAC3Q96MF2 364 aa15.37■□□□□ 0.05
CLDND1-231ENST00000515620 CDCA7Q9BWT1 371 aaPredicted RBP15.37■□□□□ 0.05
CLDND1-231ENST00000515620 MAP3K5Q99683 1374 aa15.36■□□□□ 0.05
CLDND1-231ENST00000515620 COL18A1P39060 1754 aa15.36■□□□□ 0.05
CLDND1-231ENST00000515620 USP6P35125 1406 aa15.36■□□□□ 0.05
CLDND1-231ENST00000515620 CPSF1Q10570 1443 aaKnown RBP15.36■□□□□ 0.05
CLDND1-231ENST00000515620 GPR162Q16538 588 aa15.36■□□□□ 0.05
CLDND1-231ENST00000515620 AXIN2Q9Y2T1 843 aa15.36■□□□□ 0.05
CLDND1-231ENST00000515620 BRD4O60885 1362 aaPredicted RBP15.36■□□□□ 0.05
CLDND1-231ENST00000515620 RAB3GAP2Q9H2M9 1393 aa15.36■□□□□ 0.05
CLDND1-231ENST00000515620 PIK3C2AO00443 1686 aa15.35■□□□□ 0.05
CLDND1-231ENST00000515620 CABP2Q9NPB3 220 aa15.35■□□□□ 0.05
CLDND1-231ENST00000515620 PAPPAQ13219 1627 aa15.35■□□□□ 0.05
CLDND1-231ENST00000515620 NHSQ6T4R5 1651 aa15.35■□□□□ 0.05
CLDND1-231ENST00000515620 CSB-PGBD3P0DP91 1061 aa15.34■□□□□ 0.05
CLDND1-231ENST00000515620 TNS2Q63HR2 1409 aa15.34■□□□□ 0.05
CLDND1-231ENST00000515620 KLHL34Q8N239 644 aa15.33■□□□□ 0.04
CLDND1-231ENST00000515620 CARD10Q9BWT7 1032 aa15.33■□□□□ 0.04
CLDND1-231ENST00000515620 QRICH2Q9H0J4 1663 aa15.32■□□□□ 0.04
CLDND1-231ENST00000515620 EXOC5O00471 708 aa15.32■□□□□ 0.04
CLDND1-231ENST00000515620 PELP1Q8IZL8 1130 aaKnown RBP15.32■□□□□ 0.04
CLDND1-231ENST00000515620 ACSBG1Q96GR2 724 aa15.32■□□□□ 0.04
CLDND1-231ENST00000515620 SOX12O15370 315 aa15.31■□□□□ 0.04
CLDND1-231ENST00000515620 ZNF827Q17R98 1081 aa15.31■□□□□ 0.04
CLDND1-231ENST00000515620 CABP1Q9NZU7 370 aa15.31■□□□□ 0.04
CLDND1-231ENST00000515620 TRPM1Q7Z4N2 1603 aa15.31■□□□□ 0.04
CLDND1-231ENST00000515620 RGPD5Q99666 1765 aa15.3■□□□□ 0.04
CLDND1-231ENST00000515620 SHANK3Q9BYB0 1731 aa15.3■□□□□ 0.04
CLDND1-231ENST00000515620 CENPJQ9HC77 1338 aaPredicted RBP15.3■□□□□ 0.04
CLDND1-231ENST00000515620 KIAA1210Q9ULL0 1709 aa15.3■□□□□ 0.04
CLDND1-231ENST00000515620 ABCC6O95255 1503 aa15.29■□□□□ 0.04
CLDND1-231ENST00000515620 CCDC7Q96M83 1385 aa15.29■□□□□ 0.04
CLDND1-231ENST00000515620 ARHGEF25Q86VW2 580 aa15.29■□□□□ 0.04
CLDND1-231ENST00000515620 NBPF1Q3BBV0 1214 aa15.28■□□□□ 0.04
CLDND1-231ENST00000515620 BTAF1O14981 1849 aa15.27■□□□□ 0.04
CLDND1-231ENST00000515620 CEP350Q5VT06 3117 aa15.26■□□□□ 0.03
CLDND1-231ENST00000515620 KCNH5Q8NCM2 988 aa15.26■□□□□ 0.03
CLDND1-231ENST00000515620 NFAT5O94916 1531 aa15.26■□□□□ 0.03
CLDND1-231ENST00000515620 POLD1P28340 1107 aa15.25■□□□□ 0.03
CLDND1-231ENST00000515620 NLGN2Q8NFZ4 835 aa15.25■□□□□ 0.03
CLDND1-231ENST00000515620 LRRC4BQ9NT99 713 aa15.25■□□□□ 0.03
CLDND1-231ENST00000515620 TTC21BQ7Z4L5 1316 aa15.24■□□□□ 0.03
CLDND1-231ENST00000515620 SLC16A10Q8TF71 515 aa15.23■□□□□ 0.03
CLDND1-231ENST00000515620 GOLGB1Q14789 3259 aaKnown RBP15.23■□□□□ 0.03
CLDND1-231ENST00000515620 AKT1S1Q96B36 256 aa15.22■□□□□ 0.03
CLDND1-231ENST00000515620 QSER1Q2KHR3 1735 aa15.22■□□□□ 0.03
CLDND1-231ENST00000515620 PNPLA7Q6ZV29 1317 aa15.21■□□□□ 0.03
CLDND1-231ENST00000515620 COL24A1Q17RW2 1714 aa15.21■□□□□ 0.03
CLDND1-231ENST00000515620 NLRP2Q9NX02 1062 aa15.21■□□□□ 0.03
CLDND1-231ENST00000515620 ATP10DQ9P241 1426 aa15.2■□□□□ 0.02
CLDND1-231ENST00000515620 IL2RBP14784 551 aa15.2■□□□□ 0.02
CLDND1-231ENST00000515620 YBX3P16989 372 aaKnown RBP eCLIP15.2■□□□□ 0.02
CLDND1-231ENST00000515620 TUBGCP6Q96RT7 1819 aa15.2■□□□□ 0.02
CLDND1-231ENST00000515620 ERBB3P21860 1342 aa15.19■□□□□ 0.02
CLDND1-231ENST00000515620 EVC2Q86UK5 1308 aa15.19■□□□□ 0.02
CLDND1-231ENST00000515620 TTC21AQ8NDW8 1320 aa15.19■□□□□ 0.02
CLDND1-231ENST00000515620 TFCP2L1Q9NZI6 479 aa15.19■□□□□ 0.02
CLDND1-231ENST00000515620 GRIN3BO60391 1043 aa15.18■□□□□ 0.02
CLDND1-231ENST00000515620 KCNQ4P56696 695 aa15.18■□□□□ 0.02
CLDND1-231ENST00000515620 SLC27A3Q5K4L6 730 aa15.18■□□□□ 0.02
CLDND1-231ENST00000515620 ZNF692Q9BU19 519 aaPredicted RBP15.18■□□□□ 0.02
CLDND1-231ENST00000515620 KTN1Q86UP2 1357 aaKnown RBP15.16■□□□□ 0.02
CLDND1-231ENST00000515620 GPBP1L1Q9HC44 474 aaPredicted RBP15.15■□□□□ 0.02
CLDND1-231ENST00000515620 LTN1O94822 1766 aa15.14■□□□□ 0.01
CLDND1-231ENST00000515620 HSPA6P17066 643 aa15.14■□□□□ 0.01
CLDND1-231ENST00000515620 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.14■□□□□ 0.01
CLDND1-231ENST00000515620 ANKRD24Q8TF21 1146 aa15.14■□□□□ 0.01
CLDND1-231ENST00000515620 SYTL4Q96C24 671 aaPredicted RBP15.14■□□□□ 0.01
CLDND1-231ENST00000515620 KAT6BQ8WYB5 2073 aa15.13■□□□□ 0.01
CLDND1-231ENST00000515620 MON2Q7Z3U7 1717 aa15.13■□□□□ 0.01
CLDND1-231ENST00000515620 DDX54Q8TDD1 881 aaKnown RBP15.13■□□□□ 0.01
CLDND1-231ENST00000515620 ZNF526Q8TF50 670 aaPredicted RBP15.13■□□□□ 0.01
CLDND1-231ENST00000515620 DOT1LQ8TEK3 1739 aa15.12■□□□□ 0.01
CLDND1-231ENST00000515620 MSL1Q68DK7 614 aa15.12■□□□□ 0.01
CLDND1-231ENST00000515620 USP54Q70EL1 1684 aa15.12■□□□□ 0.01
CLDND1-231ENST00000515620 NME9Q86XW9 330 aa15.11■□□□□ 0.01
CLDND1-231ENST00000515620 LY75O60449 1722 aa15.11■□□□□ 0.01
CLDND1-231ENST00000515620 ADCY9O60503 1353 aa15.11■□□□□ 0.01
CLDND1-231ENST00000515620 USP31Q70CQ4 1352 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms