RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 HOXC9P31274 260 aa12.38□□□□□ -0.43
TPM3-222ENST00000515609 PRKAR2BP31323 418 aa12.38□□□□□ -0.43
TPM3-222ENST00000515609 TMPOP42166 694 aaKnown RBP12.38□□□□□ -0.43
TPM3-222ENST00000515609 WWC1Q8IX03 1113 aa12.38□□□□□ -0.43
TPM3-222ENST00000515609 RSPH6AQ9H0K4 717 aa12.38□□□□□ -0.43
TPM3-222ENST00000515609 SOS2Q07890 1332 aaPredicted RBP12.37□□□□□ -0.43
TPM3-222ENST00000515609 PHRF1Q9P1Y6 1649 aaKnown RBP12.37□□□□□ -0.43
TPM3-222ENST00000515609 TOM1O60784 492 aa12.37□□□□□ -0.43
TPM3-222ENST00000515609 XPCQ01831 940 aaPredicted RBP12.37□□□□□ -0.43
TPM3-222ENST00000515609 HSP90AB2PQ58FF8 381 aa12.37□□□□□ -0.43
TPM3-222ENST00000515609 IQSEC2Q5JU85 1478 aa12.37□□□□□ -0.43
TPM3-222ENST00000515609 PXDNQ92626 1479 aa12.37□□□□□ -0.43
TPM3-222ENST00000515609 ABCC6O95255 1503 aa12.37□□□□□ -0.43
TPM3-222ENST00000515609 ALS2Q96Q42 1657 aa12.36□□□□□ -0.43
TPM3-222ENST00000515609 CT47B1P0C2W7 299 aaPredicted RBP12.36□□□□□ -0.43
TPM3-222ENST00000515609 FBLN1P23142 703 aa12.36□□□□□ -0.43
TPM3-222ENST00000515609 HAP1P54257 671 aaPredicted RBP12.36□□□□□ -0.43
TPM3-222ENST00000515609 RIPK4P57078 832 aa12.36□□□□□ -0.43
TPM3-222ENST00000515609 SLFN5Q08AF3 891 aa12.36□□□□□ -0.43
TPM3-222ENST00000515609 NFE2L2Q16236 605 aa12.36□□□□□ -0.43
TPM3-222ENST00000515609 ARHGEF25Q86VW2 580 aa12.36□□□□□ -0.43
TPM3-222ENST00000515609 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.36□□□□□ -0.43
TPM3-222ENST00000515609 PHF23Q9BUL5 403 aaPredicted RBP12.36□□□□□ -0.43
TPM3-222ENST00000515609 NFAT5O94916 1531 aa12.36□□□□□ -0.43
TPM3-222ENST00000515609 NEUROD2Q15784 382 aa12.35□□□□□ -0.43
TPM3-222ENST00000515609 SULT6B1Q6IMI4 303 aa12.35□□□□□ -0.43
TPM3-222ENST00000515609 LRRC59Q96AG4 307 aaKnown RBP12.35□□□□□ -0.43
TPM3-222ENST00000515609 RCAN3Q9UKA8 241 aa12.35□□□□□ -0.43
TPM3-222ENST00000515609 IGSF1Q8N6C5 1336 aa12.35□□□□□ -0.43
TPM3-222ENST00000515609 MED1Q15648 1581 aaPredicted RBP12.35□□□□□ -0.43
TPM3-222ENST00000515609 KDRP35968 1356 aa12.34□□□□□ -0.43
TPM3-222ENST00000515609 PLEKHG2Q9H7P9 1386 aa12.34□□□□□ -0.43
TPM3-222ENST00000515609 HMOX1P09601 288 aa12.34□□□□□ -0.43
TPM3-222ENST00000515609 GAS2L2Q8NHY3 880 aa12.34□□□□□ -0.43
TPM3-222ENST00000515609 SUPT16HQ9Y5B9 1047 aaKnown RBP12.34□□□□□ -0.43
TPM3-222ENST00000515609 LTBP4Q8N2S1 1624 aa12.33□□□□□ -0.43
TPM3-222ENST00000515609 CPDO75976 1380 aa12.33□□□□□ -0.44
TPM3-222ENST00000515609 HTATSF1O43719 755 aaKnown RBP12.33□□□□□ -0.44
TPM3-222ENST00000515609 TRMT2AQ8IZ69 625 aaKnown RBP12.33□□□□□ -0.44
TPM3-222ENST00000515609 MARF1Q9Y4F3 1742 aaKnown RBP12.33□□□□□ -0.44
TPM3-222ENST00000515609 PEAK1Q9H792 1746 aa12.32□□□□□ -0.44
TPM3-222ENST00000515609 DUSP27Q5VZP5 1158 aa12.32□□□□□ -0.44
TPM3-222ENST00000515609 PELP1Q8IZL8 1130 aaKnown RBP12.32□□□□□ -0.44
TPM3-222ENST00000515609 RTF1Q92541 710 aaKnown RBP12.32□□□□□ -0.44
TPM3-222ENST00000515609 LTN1O94822 1766 aa12.32□□□□□ -0.44
TPM3-222ENST00000515609 GNAI1P63096 354 aa12.31□□□□□ -0.44
TPM3-222ENST00000515609 AMOTQ4VCS5 1084 aa12.31□□□□□ -0.44
TPM3-222ENST00000515609 ZNF428Q96B54 188 aa12.31□□□□□ -0.44
TPM3-222ENST00000515609 EYA1Q99502 592 aa12.31□□□□□ -0.44
TPM3-222ENST00000515609 RRP7AQ9Y3A4 280 aaKnown RBP12.31□□□□□ -0.44
TPM3-222ENST00000515609 NHSL1Q5SYE7 1610 aa12.3□□□□□ -0.44
TPM3-222ENST00000515609 ZBTB7CA1YPR0 619 aa12.3□□□□□ -0.44
TPM3-222ENST00000515609 CDCA7LQ96GN5 454 aa12.3□□□□□ -0.44
TPM3-222ENST00000515609 RGPD1P0DJD0 1748 aa12.3□□□□□ -0.44
TPM3-222ENST00000515609 CHMP4AQ9BY43 222 aa12.29□□□□□ -0.44
TPM3-222ENST00000515609 IFT57Q9NWB7 429 aa12.29□□□□□ -0.44
TPM3-222ENST00000515609 ZC3H6P61129 1189 aaKnown RBP12.28□□□□□ -0.44
TPM3-222ENST00000515609 FKBP8Q14318 412 aa12.28□□□□□ -0.44
TPM3-222ENST00000515609 PLEKHO1Q53GL0 409 aaPredicted RBP12.28□□□□□ -0.44
TPM3-222ENST00000515609 ANKRD24Q8TF21 1146 aa12.28□□□□□ -0.44
TPM3-222ENST00000515609 LTV1Q96GA3 475 aaPredicted RBP12.28□□□□□ -0.44
TPM3-222ENST00000515609 PRDM11Q9NQV5 511 aa12.28□□□□□ -0.44
TPM3-222ENST00000515609 TRIM35Q9UPQ4 493 aa12.28□□□□□ -0.44
TPM3-222ENST00000515609 AHDC1Q5TGY3 1603 aaPredicted RBP12.28□□□□□ -0.44
TPM3-222ENST00000515609 RNF123Q5XPI4 1314 aa12.28□□□□□ -0.44
TPM3-222ENST00000515609 SENP3-EIF4A1A0A087X0R7 540 aa12.27□□□□□ -0.45
TPM3-222ENST00000515609 CSB-PGBD3P0DP91 1061 aa12.27□□□□□ -0.45
TPM3-222ENST00000515609 MS4A1P11836 297 aa12.27□□□□□ -0.45
TPM3-222ENST00000515609 DDX17Q92841 729 aaKnown RBP12.27□□□□□ -0.45
TPM3-222ENST00000515609 PHACTR3Q96KR7 559 aa12.27□□□□□ -0.45
TPM3-222ENST00000515609 ERBB3P21860 1342 aa12.27□□□□□ -0.45
TPM3-222ENST00000515609 FAM208AQ9UK61 1670 aaKnown RBP12.26□□□□□ -0.45
TPM3-222ENST00000515609 GNAT3A8MTJ3 354 aa12.26□□□□□ -0.45
TPM3-222ENST00000515609 AEBP1Q8IUX7 1158 aa12.26□□□□□ -0.45
TPM3-222ENST00000515609 RAPGEF4Q8WZA2 1011 aa12.26□□□□□ -0.45
TPM3-222ENST00000515609 CFAP44Q96MT7 982 aa12.26□□□□□ -0.45
TPM3-222ENST00000515609 BABAM1Q9NWV8 329 aa12.26□□□□□ -0.45
TPM3-222ENST00000515609 RRP1P56182 461 aaKnown RBP12.25□□□□□ -0.45
TPM3-222ENST00000515609 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.25□□□□□ -0.45
TPM3-222ENST00000515609 ROBO1Q9Y6N7 1651 aa12.25□□□□□ -0.45
TPM3-222ENST00000515609 NCAPD2Q15021 1401 aa12.24□□□□□ -0.45
TPM3-222ENST00000515609 C1orf141Q5JVX7 400 aa12.24□□□□□ -0.45
TPM3-222ENST00000515609 KIAA0232Q92628 1395 aa12.24□□□□□ -0.45
TPM3-222ENST00000515609 NLRP2Q9NX02 1062 aa12.24□□□□□ -0.45
TPM3-222ENST00000515609 SPG7Q9UQ90 795 aa12.24□□□□□ -0.45
TPM3-222ENST00000515609 MAP3K5Q99683 1374 aa12.23□□□□□ -0.45
TPM3-222ENST00000515609 SOS1Q07889 1333 aaPredicted RBP12.23□□□□□ -0.45
TPM3-222ENST00000515609 UBAP1LF5GYI3 381 aa12.23□□□□□ -0.45
TPM3-222ENST00000515609 PLEKHG5O94827 1062 aa12.23□□□□□ -0.45
TPM3-222ENST00000515609 TATP17735 454 aaPredicted RBP12.23□□□□□ -0.45
TPM3-222ENST00000515609 NBPF6Q5VWK0 638 aa12.23□□□□□ -0.45
TPM3-222ENST00000515609 CABLES1Q8TDN4 633 aa12.23□□□□□ -0.45
TPM3-222ENST00000515609 NBPF4Q96M43 638 aa12.23□□□□□ -0.45
TPM3-222ENST00000515609 FANCIQ9NVI1 1328 aa12.22□□□□□ -0.45
TPM3-222ENST00000515609 CANXP27824 592 aaKnown RBP12.22□□□□□ -0.45
TPM3-222ENST00000515609 EVA1CP58658 441 aa12.22□□□□□ -0.45
TPM3-222ENST00000515609 AAMPQ13685 434 aa12.22□□□□□ -0.45
TPM3-222ENST00000515609 MTHFSDQ2M296 383 aaKnown RBP12.22□□□□□ -0.45
TPM3-222ENST00000515609 CRYBG1Q9Y4K1 1723 aa12.22□□□□□ -0.45
TPM3-222ENST00000515609 WDR17Q8IZU2 1322 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms