RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 C11orf95C9JLR9 678 aaPredicted RBP19.16■□□□□ 0.66
TCOF1-215ENST00000515516 TMF1P82094 1093 aa19.16■□□□□ 0.66
TCOF1-215ENST00000515516 CLSPNQ9HAW4 1339 aa19.16■□□□□ 0.66
TCOF1-215ENST00000515516 USP31Q70CQ4 1352 aa19.16■□□□□ 0.66
TCOF1-215ENST00000515516 NINLQ9Y2I6 1382 aa19.16■□□□□ 0.66
TCOF1-215ENST00000515516 APBA3O96018 575 aa19.15■□□□□ 0.66
TCOF1-215ENST00000515516 CDCA7Q9BWT1 371 aaPredicted RBP19.15■□□□□ 0.66
TCOF1-215ENST00000515516 EDC4Q6P2E9 1401 aaKnown RBP19.15■□□□□ 0.66
TCOF1-215ENST00000515516 DDB1Q16531 1140 aa19.14■□□□□ 0.65
TCOF1-215ENST00000515516 CD163L1Q9NR16 1453 aa19.14■□□□□ 0.65
TCOF1-215ENST00000515516 AKAP12Q02952 1782 aa19.14■□□□□ 0.65
TCOF1-215ENST00000515516 CDCA8Q53HL2 280 aa19.13■□□□□ 0.65
TCOF1-215ENST00000515516 CARD10Q9BWT7 1032 aa19.13■□□□□ 0.65
TCOF1-215ENST00000515516 A0A1W2PP64 1363 aa19.13■□□□□ 0.65
TCOF1-215ENST00000515516 USP47Q96K76 1375 aa19.13■□□□□ 0.65
TCOF1-215ENST00000515516 EZH2Q15910 746 aaKnown RBP19.1■□□□□ 0.65
TCOF1-215ENST00000515516 DISP2A7MBM2 1401 aa19.09■□□□□ 0.65
TCOF1-215ENST00000515516 COG3Q96JB2 828 aa19.09■□□□□ 0.65
TCOF1-215ENST00000515516 NFAT5O94916 1531 aa19.09■□□□□ 0.65
TCOF1-215ENST00000515516 CCDC7Q96M83 1385 aa19.08■□□□□ 0.65
TCOF1-215ENST00000515516 EXOC5O00471 708 aa19.08■□□□□ 0.64
TCOF1-215ENST00000515516 CAMKK2Q96RR4 588 aa19.08■□□□□ 0.64
TCOF1-215ENST00000515516 NLRP2Q9NX02 1062 aa19.08■□□□□ 0.64
TCOF1-215ENST00000515516 RGPD1P0DJD0 1748 aa19.08■□□□□ 0.64
TCOF1-215ENST00000515516 MON2Q7Z3U7 1717 aa19.08■□□□□ 0.64
TCOF1-215ENST00000515516 PSDA5PKW4 1024 aaPredicted RBP19.07■□□□□ 0.64
TCOF1-215ENST00000515516 OVOS2A0A0G2JMS6 1433 aa19.07■□□□□ 0.64
TCOF1-215ENST00000515516 OVOS2A0A0J9YW53 1432 aa19.07■□□□□ 0.64
TCOF1-215ENST00000515516 OVOS2Q6IE36 1432 aa19.07■□□□□ 0.64
TCOF1-215ENST00000515516 PARD3Q8TEW0 1356 aa19.06■□□□□ 0.64
TCOF1-215ENST00000515516 CCER1Q8TC90 406 aaPredicted RBP19.06■□□□□ 0.64
TCOF1-215ENST00000515516 ANKRD24Q8TF21 1146 aa19.06■□□□□ 0.64
TCOF1-215ENST00000515516 ANKRD36BQ8N2N9 1353 aa19.06■□□□□ 0.64
TCOF1-215ENST00000515516 COL18A1P39060 1754 aa19.05■□□□□ 0.64
TCOF1-215ENST00000515516 ABCC6O95255 1503 aa19.05■□□□□ 0.64
TCOF1-215ENST00000515516 ERBB3P21860 1342 aa19.04■□□□□ 0.64
TCOF1-215ENST00000515516 R3HDM1Q15032 1099 aaKnown RBP19.03■□□□□ 0.64
TCOF1-215ENST00000515516 NBPF14Q5TI25 921 aa19.03■□□□□ 0.64
TCOF1-215ENST00000515516 MARCH10Q8NA82 808 aaPredicted RBP19.03■□□□□ 0.64
TCOF1-215ENST00000515516 IP6K1Q92551 441 aa19.03■□□□□ 0.64
TCOF1-215ENST00000515516 AMPHP49418 695 aa19.02■□□□□ 0.64
TCOF1-215ENST00000515516 PARP4Q9UKK3 1724 aaKnown RBP19.02■□□□□ 0.63
TCOF1-215ENST00000515516 LTV1Q96GA3 475 aaPredicted RBP19.01■□□□□ 0.63
TCOF1-215ENST00000515516 BCL11BQ9C0K0 894 aaPredicted RBP19.01■□□□□ 0.63
TCOF1-215ENST00000515516 IL2RBP14784 551 aa19■□□□□ 0.63
TCOF1-215ENST00000515516 TNS1Q9HBL0 1735 aaKnown RBP18.98■□□□□ 0.63
TCOF1-215ENST00000515516 FYB1O15117 783 aa18.98■□□□□ 0.63
TCOF1-215ENST00000515516 PLSCR1O15162 318 aa18.98■□□□□ 0.63
TCOF1-215ENST00000515516 GGNBP2Q9H3C7 697 aa18.98■□□□□ 0.63
TCOF1-215ENST00000515516 USP54Q70EL1 1684 aa18.98■□□□□ 0.63
TCOF1-215ENST00000515516 MAP3K19Q56UN5 1328 aa18.98■□□□□ 0.63
TCOF1-215ENST00000515516 LRRC37A3O60309 1634 aa18.96■□□□□ 0.63
TCOF1-215ENST00000515516 HOXC9P31274 260 aa18.96■□□□□ 0.63
TCOF1-215ENST00000515516 POLR3GLQ9BT43 218 aa18.96■□□□□ 0.63
TCOF1-215ENST00000515516 BCL9O00512 1426 aa18.96■□□□□ 0.63
TCOF1-215ENST00000515516 FBLN1P23142 703 aa18.95■□□□□ 0.62
TCOF1-215ENST00000515516 TNS2Q63HR2 1409 aa18.94■□□□□ 0.62
TCOF1-215ENST00000515516 EIF4G2P78344 907 aaKnown RBP eCLIP18.94■□□□□ 0.62
TCOF1-215ENST00000515516 RRS1Q15050 365 aaKnown RBP18.93■□□□□ 0.62
TCOF1-215ENST00000515516 RGPD5Q99666 1765 aa18.93■□□□□ 0.62
TCOF1-215ENST00000515516 PTF1AQ7RTS3 328 aa18.92■□□□□ 0.62
TCOF1-215ENST00000515516 DDX54Q8TDD1 881 aaKnown RBP18.91■□□□□ 0.62
TCOF1-215ENST00000515516 ACSBG1Q96GR2 724 aa18.91■□□□□ 0.62
TCOF1-215ENST00000515516 CARD14Q9BXL6 1004 aa18.91■□□□□ 0.62
TCOF1-215ENST00000515516 RTL1A6NKG5 1358 aa18.91■□□□□ 0.62
TCOF1-215ENST00000515516 PEAK1Q9H792 1746 aa18.91■□□□□ 0.62
TCOF1-215ENST00000515516 LTN1O94822 1766 aa18.9■□□□□ 0.62
TCOF1-215ENST00000515516 SMG6Q86US8 1419 aaKnown RBP18.9■□□□□ 0.62
TCOF1-215ENST00000515516 NSD3Q9BZ95 1437 aa18.9■□□□□ 0.62
TCOF1-215ENST00000515516 KCNQ2O43526 872 aa18.89■□□□□ 0.61
TCOF1-215ENST00000515516 SRCAPQ6ZRS2 3230 aa18.89■□□□□ 0.61
TCOF1-215ENST00000515516 HSPA5P11021 654 aaKnown RBP18.88■□□□□ 0.61
TCOF1-215ENST00000515516 CGNL1Q0VF96 1302 aa18.87■□□□□ 0.61
TCOF1-215ENST00000515516 WNK3Q9BYP7 1800 aa18.87■□□□□ 0.61
TCOF1-215ENST00000515516 TXNRD1Q16881 649 aa18.86■□□□□ 0.61
TCOF1-215ENST00000515516 HSP90AB2PQ58FF8 381 aa18.85■□□□□ 0.61
TCOF1-215ENST00000515516 PROM2Q8N271 834 aa18.85■□□□□ 0.61
TCOF1-215ENST00000515516 ZCRB1Q8TBF4 217 aaKnown RBP18.85■□□□□ 0.61
TCOF1-215ENST00000515516 RAPGEF4Q8WZA2 1011 aa18.85■□□□□ 0.61
TCOF1-215ENST00000515516 STK32BQ9NY57 414 aa18.85■□□□□ 0.61
TCOF1-215ENST00000515516 LRP5O75197 1615 aa18.85■□□□□ 0.61
TCOF1-215ENST00000515516 INSRP06213 1382 aa18.84■□□□□ 0.61
TCOF1-215ENST00000515516 FLT4P35916 1363 aa18.84■□□□□ 0.61
TCOF1-215ENST00000515516 KIF24Q5T7B8 1368 aa18.84■□□□□ 0.61
TCOF1-215ENST00000515516 PPM1GO15355 546 aaPredicted RBP18.84■□□□□ 0.61
TCOF1-215ENST00000515516 NBPF6Q5VWK0 638 aa18.84■□□□□ 0.61
TCOF1-215ENST00000515516 NBPF4Q96M43 638 aa18.84■□□□□ 0.61
TCOF1-215ENST00000515516 RREB1Q92766 1687 aa18.83■□□□□ 0.61
TCOF1-215ENST00000515516 TATP17735 454 aaPredicted RBP18.83■□□□□ 0.6
TCOF1-215ENST00000515516 SPON1Q9HCB6 807 aa18.83■□□□□ 0.6
TCOF1-215ENST00000515516 USHBP1Q8N6Y0 703 aa18.82■□□□□ 0.6
TCOF1-215ENST00000515516 SYTL4Q96C24 671 aaPredicted RBP18.82■□□□□ 0.6
TCOF1-215ENST00000515516 NUP188Q5SRE5 1749 aa18.81■□□□□ 0.6
TCOF1-215ENST00000515516 ANO8Q9HCE9 1232 aaPredicted RBP18.81■□□□□ 0.6
TCOF1-215ENST00000515516 PPP1R1BQ9UD71 204 aaPredicted RBP18.81■□□□□ 0.6
TCOF1-215ENST00000515516 EMILIN1Q9Y6C2 1016 aa18.81■□□□□ 0.6
TCOF1-215ENST00000515516 FAM208AQ9UK61 1670 aaKnown RBP18.8■□□□□ 0.6
TCOF1-215ENST00000515516 SLC15A2Q16348 729 aa18.79■□□□□ 0.6
TCOF1-215ENST00000515516 PANK3Q9H999 370 aa18.79■□□□□ 0.6
TCOF1-215ENST00000515516 SBF2Q86WG5 1849 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms