RNA–Protein interactions for RNA: ENST00000515483.5

TNPO1-210, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-210ENST00000515483 CDCA7Q9BWT1 371 aaPredicted RBP21.83■■□□□ 1.09
TNPO1-210ENST00000515483 BCL9O00512 1426 aa21.82■■□□□ 1.08
TNPO1-210ENST00000515483 ZBTB7CA1YPR0 619 aa21.81■■□□□ 1.08
TNPO1-210ENST00000515483 MARCH10Q8NA82 808 aaPredicted RBP21.81■■□□□ 1.08
TNPO1-210ENST00000515483 AATKQ6ZMQ8 1374 aa21.8■■□□□ 1.08
TNPO1-210ENST00000515483 ARXQ96QS3 562 aa21.8■■□□□ 1.08
TNPO1-210ENST00000515483 SGIP1Q9BQI5 828 aa21.8■■□□□ 1.08
TNPO1-210ENST00000515483 CHD4Q14839 1912 aa21.79■■□□□ 1.08
TNPO1-210ENST00000515483 SBF2Q86WG5 1849 aa21.79■■□□□ 1.08
TNPO1-210ENST00000515483 GIGYF1O75420 1035 aaPredicted RBP21.79■■□□□ 1.08
TNPO1-210ENST00000515483 BRD4O60885 1362 aaPredicted RBP21.78■■□□□ 1.08
TNPO1-210ENST00000515483 LRRC37A3O60309 1634 aa21.77■■□□□ 1.08
TNPO1-210ENST00000515483 GPR162Q16538 588 aa21.77■■□□□ 1.08
TNPO1-210ENST00000515483 MAP3K5Q99683 1374 aa21.76■■□□□ 1.07
TNPO1-210ENST00000515483 NLRP6P59044 892 aa21.75■■□□□ 1.07
TNPO1-210ENST00000515483 WDR17Q8IZU2 1322 aa21.75■■□□□ 1.07
TNPO1-210ENST00000515483 TOPAZ1Q8N9V7 1692 aa21.74■■□□□ 1.07
TNPO1-210ENST00000515483 ARHGEF28Q8N1W1 1705 aaKnown RBP21.74■■□□□ 1.07
TNPO1-210ENST00000515483 EXOC5O00471 708 aa21.73■■□□□ 1.07
TNPO1-210ENST00000515483 SRPK2P78362 688 aaKnown RBP21.71■■□□□ 1.07
TNPO1-210ENST00000515483 PPIP5K1Q6PFW1 1433 aa21.71■■□□□ 1.07
TNPO1-210ENST00000515483 CARD10Q9BWT7 1032 aa21.7■■□□□ 1.06
TNPO1-210ENST00000515483 AXIN2Q9Y2T1 843 aa21.69■■□□□ 1.06
TNPO1-210ENST00000515483 CSB-PGBD3P0DP91 1061 aa21.68■■□□□ 1.06
TNPO1-210ENST00000515483 CEP350Q5VT06 3117 aa21.66■■□□□ 1.06
TNPO1-210ENST00000515483 SLIT3O75094 1523 aa21.66■■□□□ 1.06
TNPO1-210ENST00000515483 USP6P35125 1406 aa21.64■■□□□ 1.06
TNPO1-210ENST00000515483 AKAP12Q02952 1782 aa21.64■■□□□ 1.06
TNPO1-210ENST00000515483 ARHGEF25Q86VW2 580 aa21.64■■□□□ 1.05
TNPO1-210ENST00000515483 PELP1Q8IZL8 1130 aaKnown RBP21.64■■□□□ 1.05
TNPO1-210ENST00000515483 SLC16A10Q8TF71 515 aa21.64■■□□□ 1.05
TNPO1-210ENST00000515483 CABP2Q9NPB3 220 aa21.64■■□□□ 1.05
TNPO1-210ENST00000515483 POLD1P28340 1107 aa21.63■■□□□ 1.05
TNPO1-210ENST00000515483 KLHL34Q8N239 644 aa21.63■■□□□ 1.05
TNPO1-210ENST00000515483 KCNH5Q8NCM2 988 aa21.63■■□□□ 1.05
TNPO1-210ENST00000515483 CABP1Q9NZU7 370 aa21.63■■□□□ 1.05
TNPO1-210ENST00000515483 CPSF1Q10570 1443 aaKnown RBP21.63■■□□□ 1.05
TNPO1-210ENST00000515483 CCDC7Q96M83 1385 aa21.62■■□□□ 1.05
TNPO1-210ENST00000515483 ACSBG1Q96GR2 724 aa21.61■■□□□ 1.05
TNPO1-210ENST00000515483 COL18A1P39060 1754 aa21.61■■□□□ 1.05
TNPO1-210ENST00000515483 WNK3Q9BYP7 1800 aa21.59■■□□□ 1.05
TNPO1-210ENST00000515483 ZNF827Q17R98 1081 aa21.59■■□□□ 1.05
TNPO1-210ENST00000515483 TNS2Q63HR2 1409 aa21.59■■□□□ 1.05
TNPO1-210ENST00000515483 CENPJQ9HC77 1338 aaPredicted RBP21.58■■□□□ 1.05
TNPO1-210ENST00000515483 GRIN3BO60391 1043 aa21.58■■□□□ 1.05
TNPO1-210ENST00000515483 RAB3GAP2Q9H2M9 1393 aa21.58■■□□□ 1.04
TNPO1-210ENST00000515483 PAPPAQ13219 1627 aa21.55■■□□□ 1.04
TNPO1-210ENST00000515483 SOX12O15370 315 aa21.55■■□□□ 1.04
TNPO1-210ENST00000515483 LRRC4BQ9NT99 713 aa21.55■■□□□ 1.04
TNPO1-210ENST00000515483 NHSQ6T4R5 1651 aa21.54■■□□□ 1.04
TNPO1-210ENST00000515483 GOLGB1Q14789 3259 aaKnown RBP21.54■■□□□ 1.04
TNPO1-210ENST00000515483 SLC27A3Q5K4L6 730 aa21.54■■□□□ 1.04
TNPO1-210ENST00000515483 AKT1S1Q96B36 256 aa21.54■■□□□ 1.04
TNPO1-210ENST00000515483 ZNF692Q9BU19 519 aaPredicted RBP21.54■■□□□ 1.04
TNPO1-210ENST00000515483 NBPF1Q3BBV0 1214 aa21.53■■□□□ 1.04
TNPO1-210ENST00000515483 TTC21BQ7Z4L5 1316 aa21.53■■□□□ 1.04
TNPO1-210ENST00000515483 SHANK3Q9BYB0 1731 aa21.52■■□□□ 1.04
TNPO1-210ENST00000515483 NLGN2Q8NFZ4 835 aa21.52■■□□□ 1.04
TNPO1-210ENST00000515483 TRPM1Q7Z4N2 1603 aa21.51■■□□□ 1.03
TNPO1-210ENST00000515483 PIK3C2AO00443 1686 aa21.51■■□□□ 1.03
TNPO1-210ENST00000515483 IL2RBP14784 551 aa21.51■■□□□ 1.03
TNPO1-210ENST00000515483 TFCP2L1Q9NZI6 479 aa21.51■■□□□ 1.03
TNPO1-210ENST00000515483 TTC21AQ8NDW8 1320 aa21.51■■□□□ 1.03
TNPO1-210ENST00000515483 ABCC6O95255 1503 aa21.5■■□□□ 1.03
TNPO1-210ENST00000515483 NLRP2Q9NX02 1062 aa21.5■■□□□ 1.03
TNPO1-210ENST00000515483 PNPLA7Q6ZV29 1317 aa21.5■■□□□ 1.03
TNPO1-210ENST00000515483 KIAA1210Q9ULL0 1709 aa21.49■■□□□ 1.03
TNPO1-210ENST00000515483 YBX3P16989 372 aaKnown RBP eCLIP21.48■■□□□ 1.039e-7■□□□□ 8.9
TNPO1-210ENST00000515483 HSPA6P17066 643 aa21.48■■□□□ 1.03
TNPO1-210ENST00000515483 GPBP1L1Q9HC44 474 aaPredicted RBP21.48■■□□□ 1.03
TNPO1-210ENST00000515483 EVC2Q86UK5 1308 aa21.47■■□□□ 1.03
TNPO1-210ENST00000515483 QRICH2Q9H0J4 1663 aa21.47■■□□□ 1.03
TNPO1-210ENST00000515483 ATP10DQ9P241 1426 aa21.46■■□□□ 1.03
TNPO1-210ENST00000515483 RGPD5Q99666 1765 aa21.46■■□□□ 1.03
TNPO1-210ENST00000515483 ERBB3P21860 1342 aa21.46■■□□□ 1.03
TNPO1-210ENST00000515483 BTAF1O14981 1849 aa21.45■■□□□ 1.02
TNPO1-210ENST00000515483 NFAT5O94916 1531 aa21.44■■□□□ 1.02
TNPO1-210ENST00000515483 KAT6BQ8WYB5 2073 aa21.41■■□□□ 1.02
TNPO1-210ENST00000515483 COL24A1Q17RW2 1714 aa21.41■■□□□ 1.02
TNPO1-210ENST00000515483 QSER1Q2KHR3 1735 aa21.41■■□□□ 1.02
TNPO1-210ENST00000515483 MSH5O43196 834 aa21.39■■□□□ 1.01
TNPO1-210ENST00000515483 DDX54Q8TDD1 881 aaKnown RBP21.39■■□□□ 1.01
TNPO1-210ENST00000515483 ANKRD24Q8TF21 1146 aa21.39■■□□□ 1.01
TNPO1-210ENST00000515483 KTN1Q86UP2 1357 aaKnown RBP21.38■■□□□ 1.01
TNPO1-210ENST00000515483 KCNQ4P56696 695 aa21.38■■□□□ 1.01
TNPO1-210ENST00000515483 SYTL4Q96C24 671 aaPredicted RBP21.37■■□□□ 1.01
TNPO1-210ENST00000515483 CD2APQ9Y5K6 639 aa21.37■■□□□ 1.01
TNPO1-210ENST00000515483 ZNF526Q8TF50 670 aaPredicted RBP21.36■■□□□ 1.01
TNPO1-210ENST00000515483 PRIM1P49642 420 aaKnown RBP21.35■■□□□ 1.01
TNPO1-210ENST00000515483 USP31Q70CQ4 1352 aa21.35■■□□□ 1.01
TNPO1-210ENST00000515483 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.34■■□□□ 1.01
TNPO1-210ENST00000515483 CCNL1Q9UK58 526 aaPredicted RBP21.34■■□□□ 1.01
TNPO1-210ENST00000515483 ADCY9O60503 1353 aa21.34■■□□□ 1.01
TNPO1-210ENST00000515483 COL23A1Q86Y22 540 aaPredicted RBP21.33■■□□□ 1.01
TNPO1-210ENST00000515483 ANKRD36BQ8N2N9 1353 aa21.33■■□□□ 1
TNPO1-210ENST00000515483 HMGB2P26583 209 aaKnown RBP21.31■■□□□ 1
TNPO1-210ENST00000515483 MSL1Q68DK7 614 aa21.31■■□□□ 1
TNPO1-210ENST00000515483 APLP1P51693 650 aa21.29■■□□□ 1
TNPO1-210ENST00000515483 FLAD1Q8NFF5 587 aa21.29■■□□□ 1
TNPO1-210ENST00000515483 TUBGCP6Q96RT7 1819 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms