RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 FAM98CQ17RN3 349 aaKnown RBP17.78■□□□□ 0.44
CLCN3-210ENST00000515420 BARGINQ6ZT62 677 aa17.78■□□□□ 0.44
CLCN3-210ENST00000515420 THRAP3Q9Y2W1 955 aaKnown RBP17.78■□□□□ 0.44
CLCN3-210ENST00000515420 CRB1P82279 1406 aa17.78■□□□□ 0.44
CLCN3-210ENST00000515420 RGPD5Q99666 1765 aa17.78■□□□□ 0.44
CLCN3-210ENST00000515420 KIF20BQ96Q89 1820 aa17.77■□□□□ 0.44
CLCN3-210ENST00000515420 ZRANB1Q9UGI0 708 aa17.77■□□□□ 0.44
CLCN3-210ENST00000515420 LARP1Q6PKG0 1096 aaKnown RBP17.76■□□□□ 0.43
CLCN3-210ENST00000515420 KRT27Q7Z3Y8 459 aa17.76■□□□□ 0.43
CLCN3-210ENST00000515420 CCDC125Q86Z20 511 aa17.75■□□□□ 0.43
CLCN3-210ENST00000515420 TCP11L2Q8N4U5 519 aa17.75■□□□□ 0.43
CLCN3-210ENST00000515420 COG3Q96JB2 828 aa17.75■□□□□ 0.43
CLCN3-210ENST00000515420 WDR17Q8IZU2 1322 aa17.74■□□□□ 0.43
CLCN3-210ENST00000515420 A0A0G2JS52 829 aa17.74■□□□□ 0.43
CLCN3-210ENST00000515420 ZBTB7CA1YPR0 619 aa17.74■□□□□ 0.43
CLCN3-210ENST00000515420 SOX12O15370 315 aa17.74■□□□□ 0.43
CLCN3-210ENST00000515420 MYT1Q01538 1121 aa17.74■□□□□ 0.43
CLCN3-210ENST00000515420 AXIN2Q9Y2T1 843 aa17.74■□□□□ 0.43
CLCN3-210ENST00000515420 PARP4Q9UKK3 1724 aaKnown RBP17.74■□□□□ 0.43
CLCN3-210ENST00000515420 WNK3Q9BYP7 1800 aa17.74■□□□□ 0.43
CLCN3-210ENST00000515420 FYB1O15117 783 aa17.72■□□□□ 0.43
CLCN3-210ENST00000515420 BLMP54132 1417 aaPredicted RBP17.72■□□□□ 0.43
CLCN3-210ENST00000515420 NSD3Q9BZ95 1437 aa17.71■□□□□ 0.43
CLCN3-210ENST00000515420 FAM208AQ9UK61 1670 aaKnown RBP17.71■□□□□ 0.42
CLCN3-210ENST00000515420 USP35Q9P2H5 1018 aa17.7■□□□□ 0.42
CLCN3-210ENST00000515420 TOM1L2Q6ZVM7 507 aa17.69■□□□□ 0.42
CLCN3-210ENST00000515420 CARD14Q9BXL6 1004 aa17.69■□□□□ 0.42
CLCN3-210ENST00000515420 ERBB3P21860 1342 aa17.69■□□□□ 0.42
CLCN3-210ENST00000515420 RTL1A6NKG5 1358 aa17.68■□□□□ 0.42
CLCN3-210ENST00000515420 CCDC7Q96M83 1385 aa17.68■□□□□ 0.42
CLCN3-210ENST00000515420 CDCA7Q9BWT1 371 aaPredicted RBP17.68■□□□□ 0.42
CLCN3-210ENST00000515420 CARD10Q9BWT7 1032 aa17.68■□□□□ 0.42
CLCN3-210ENST00000515420 CGNL1Q0VF96 1302 aa17.68■□□□□ 0.42
CLCN3-210ENST00000515420 ANKRD26Q9UPS8 1709 aa17.67■□□□□ 0.42
CLCN3-210ENST00000515420 IP6K1Q92551 441 aa17.67■□□□□ 0.42
CLCN3-210ENST00000515420 GGNBP2Q9H3C7 697 aa17.67■□□□□ 0.42
CLCN3-210ENST00000515420 LRRC37A3O60309 1634 aa17.67■□□□□ 0.42
CLCN3-210ENST00000515420 RGPD1P0DJD0 1748 aa17.67■□□□□ 0.42
CLCN3-210ENST00000515420 CSB-PGBD3P0DP91 1061 aa17.66■□□□□ 0.42
CLCN3-210ENST00000515420 MAP3K19Q56UN5 1328 aa17.66■□□□□ 0.42
CLCN3-210ENST00000515420 KIF24Q5T7B8 1368 aa17.66■□□□□ 0.42
CLCN3-210ENST00000515420 DISP2A7MBM2 1401 aa17.65■□□□□ 0.42
CLCN3-210ENST00000515420 C11orf95C9JLR9 678 aaPredicted RBP17.65■□□□□ 0.42
CLCN3-210ENST00000515420 PDE3BQ13370 1112 aa17.64■□□□□ 0.41
CLCN3-210ENST00000515420 POLR3GLQ9BT43 218 aa17.64■□□□□ 0.41
CLCN3-210ENST00000515420 FAM196AQ6ZSG2 479 aa17.63■□□□□ 0.41
CLCN3-210ENST00000515420 ANKRD24Q8TF21 1146 aa17.63■□□□□ 0.41
CLCN3-210ENST00000515420 HOXC9P31274 260 aa17.62■□□□□ 0.41
CLCN3-210ENST00000515420 AMPHP49418 695 aa17.62■□□□□ 0.41
CLCN3-210ENST00000515420 SF3B2Q13435 895 aaKnown RBP17.62■□□□□ 0.41
CLCN3-210ENST00000515420 NSD2O96028 1365 aa17.62■□□□□ 0.41
CLCN3-210ENST00000515420 PEAK1Q9H792 1746 aa17.61■□□□□ 0.41
CLCN3-210ENST00000515420 TNS1Q9HBL0 1735 aaKnown RBP17.61■□□□□ 0.41
CLCN3-210ENST00000515420 KIF7Q2M1P5 1343 aa17.61■□□□□ 0.41
CLCN3-210ENST00000515420 DDB1Q16531 1140 aa17.6■□□□□ 0.41
CLCN3-210ENST00000515420 PANK3Q9H999 370 aa17.6■□□□□ 0.41
CLCN3-210ENST00000515420 NLRP2Q9NX02 1062 aa17.6■□□□□ 0.41
CLCN3-210ENST00000515420 FLT4P35916 1363 aa17.6■□□□□ 0.41
CLCN3-210ENST00000515420 OVOS2A0A0G2JMS6 1433 aa17.6■□□□□ 0.41
CLCN3-210ENST00000515420 MAP2P11137 1827 aaKnown RBP17.59■□□□□ 0.41
CLCN3-210ENST00000515420 BCL9O00512 1426 aa17.59■□□□□ 0.41
CLCN3-210ENST00000515420 TNS2Q63HR2 1409 aa17.59■□□□□ 0.41
CLCN3-210ENST00000515420 RRS1Q15050 365 aaKnown RBP17.59■□□□□ 0.41
CLCN3-210ENST00000515420 SMG6Q86US8 1419 aaKnown RBP17.58■□□□□ 0.41
CLCN3-210ENST00000515420 INSRP06213 1382 aa17.58■□□□□ 0.4
CLCN3-210ENST00000515420 FBLN1P23142 703 aa17.58■□□□□ 0.4
CLCN3-210ENST00000515420 FAM182BQ5T319 152 aa17.58■□□□□ 0.4
CLCN3-210ENST00000515420 SBF2Q86WG5 1849 aa17.57■□□□□ 0.4
CLCN3-210ENST00000515420 BAG6P46379 1132 aa17.57■□□□□ 0.4
CLCN3-210ENST00000515420 RGPD2P0DJD1 1756 aa17.56■□□□□ 0.4
CLCN3-210ENST00000515420 IL2RBP14784 551 aa17.56■□□□□ 0.4
CLCN3-210ENST00000515420 EXOC5O00471 708 aa17.55■□□□□ 0.4
CLCN3-210ENST00000515420 KNSTRNQ9Y448 316 aa17.54■□□□□ 0.4
CLCN3-210ENST00000515420 LTV1Q96GA3 475 aaPredicted RBP17.53■□□□□ 0.4
CLCN3-210ENST00000515420 PARD3Q8TEW0 1356 aa17.53■□□□□ 0.4
CLCN3-210ENST00000515420 TRIM37O94972 964 aa17.52■□□□□ 0.4
CLCN3-210ENST00000515420 DEFB132Q7Z7B7 95 aa17.52■□□□□ 0.4
CLCN3-210ENST00000515420 EMILIN1Q9Y6C2 1016 aa17.52■□□□□ 0.4
CLCN3-210ENST00000515420 RGPD3A6NKT7 1758 aaPredicted RBP17.52■□□□□ 0.4
CLCN3-210ENST00000515420 RGPD4Q7Z3J3 1758 aa17.52■□□□□ 0.4
CLCN3-210ENST00000515420 WASHC2AQ641Q2 1341 aa17.51■□□□□ 0.39
CLCN3-210ENST00000515420 HSP90AB2PQ58FF8 381 aa17.51■□□□□ 0.39
CLCN3-210ENST00000515420 MARCH10Q8NA82 808 aaPredicted RBP17.51■□□□□ 0.39
CLCN3-210ENST00000515420 POLKQ9UBT6 870 aa17.5■□□□□ 0.39
CLCN3-210ENST00000515420 NCAPD2Q15021 1401 aa17.49■□□□□ 0.39
CLCN3-210ENST00000515420 AMER1Q5JTC6 1135 aaPredicted RBP17.49■□□□□ 0.39
CLCN3-210ENST00000515420 NBPF6Q5VWK0 638 aa17.49■□□□□ 0.39
CLCN3-210ENST00000515420 NBPF4Q96M43 638 aa17.49■□□□□ 0.39
CLCN3-210ENST00000515420 RREB1Q92766 1687 aa17.48■□□□□ 0.39
CLCN3-210ENST00000515420 PER1O15534 1290 aaPredicted RBP17.48■□□□□ 0.39
CLCN3-210ENST00000515420 NPC1L1Q9UHC9 1359 aa17.48■□□□□ 0.39
CLCN3-210ENST00000515420 NHSQ6T4R5 1651 aa17.48■□□□□ 0.39
CLCN3-210ENST00000515420 SHANK3Q9BYB0 1731 aa17.47■□□□□ 0.39
CLCN3-210ENST00000515420 APBA3O96018 575 aa17.47■□□□□ 0.39
CLCN3-210ENST00000515420 EN1Q05925 392 aaPredicted RBP17.47■□□□□ 0.39
CLCN3-210ENST00000515420 MORC1Q86VD1 984 aa17.47■□□□□ 0.39
CLCN3-210ENST00000515420 BCL11BQ9C0K0 894 aaPredicted RBP17.47■□□□□ 0.39
CLCN3-210ENST00000515420 MEGF6O75095 1541 aa17.47■□□□□ 0.39
CLCN3-210ENST00000515420 PPM1GO15355 546 aaPredicted RBP17.46■□□□□ 0.39
CLCN3-210ENST00000515420 CAMKK2Q96RR4 588 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms