RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 CDCA8Q53HL2 280 aa16.01■□□□□ 0.15
VCAN-212ENST00000515397 CARD14Q9BXL6 1004 aa16.01■□□□□ 0.15
VCAN-212ENST00000515397 MON2Q7Z3U7 1717 aa16.01■□□□□ 0.15
VCAN-212ENST00000515397 LMO7Q8WWI1 1683 aa16.01■□□□□ 0.15
VCAN-212ENST00000515397 FYB1O15117 783 aa16■□□□□ 0.15
VCAN-212ENST00000515397 BARGINQ6ZT62 677 aa16■□□□□ 0.15
VCAN-212ENST00000515397 COG3Q96JB2 828 aa16■□□□□ 0.15
VCAN-212ENST00000515397 ANKRD36BQ8N2N9 1353 aa16■□□□□ 0.15
VCAN-212ENST00000515397 C11orf95C9JLR9 678 aaPredicted RBP15.99■□□□□ 0.15
VCAN-212ENST00000515397 PDE3BQ13370 1112 aa15.99■□□□□ 0.15
VCAN-212ENST00000515397 LTV1Q96GA3 475 aaPredicted RBP15.99■□□□□ 0.15
VCAN-212ENST00000515397 NINLQ9Y2I6 1382 aa15.99■□□□□ 0.15
VCAN-212ENST00000515397 NFAT5O94916 1531 aa15.99■□□□□ 0.15
VCAN-212ENST00000515397 WDR17Q8IZU2 1322 aa15.98■□□□□ 0.15
VCAN-212ENST00000515397 CRB1P82279 1406 aa15.98■□□□□ 0.15
VCAN-212ENST00000515397 CCDC125Q86Z20 511 aa15.98■□□□□ 0.15
VCAN-212ENST00000515397 COL18A1P39060 1754 aa15.98■□□□□ 0.15
VCAN-212ENST00000515397 SF3B2Q13435 895 aaKnown RBP15.97■□□□□ 0.15
VCAN-212ENST00000515397 RRS1Q15050 365 aaKnown RBP15.97■□□□□ 0.15
VCAN-212ENST00000515397 NLRP2Q9NX02 1062 aa15.97■□□□□ 0.15
VCAN-212ENST00000515397 THRAP3Q9Y2W1 955 aaKnown RBP15.97■□□□□ 0.15
VCAN-212ENST00000515397 OVOS2A0A0J9YW53 1432 aa15.96■□□□□ 0.15
VCAN-212ENST00000515397 OVOS2Q6IE36 1432 aa15.96■□□□□ 0.15
VCAN-212ENST00000515397 TRIM37O94972 964 aa15.96■□□□□ 0.15
VCAN-212ENST00000515397 ANKRD24Q8TF21 1146 aa15.96■□□□□ 0.15
VCAN-212ENST00000515397 BLMP54132 1417 aaPredicted RBP15.95■□□□□ 0.14
VCAN-212ENST00000515397 CARD10Q9BWT7 1032 aa15.95■□□□□ 0.14
VCAN-212ENST00000515397 RGPD5Q99666 1765 aa15.95■□□□□ 0.14
VCAN-212ENST00000515397 MAP3K19Q56UN5 1328 aa15.94■□□□□ 0.14
VCAN-212ENST00000515397 AMPHP49418 695 aa15.94■□□□□ 0.14
VCAN-212ENST00000515397 EN1Q05925 392 aaPredicted RBP15.94■□□□□ 0.14
VCAN-212ENST00000515397 THSD7AQ9UPZ6 1657 aa15.94■□□□□ 0.14
VCAN-212ENST00000515397 DDB1Q16531 1140 aa15.93■□□□□ 0.14
VCAN-212ENST00000515397 FAM196AQ6ZSG2 479 aa15.93■□□□□ 0.14
VCAN-212ENST00000515397 IP6K1Q92551 441 aa15.93■□□□□ 0.14
VCAN-212ENST00000515397 NSD3Q9BZ95 1437 aa15.93■□□□□ 0.14
VCAN-212ENST00000515397 ERBB3P21860 1342 aa15.92■□□□□ 0.14
VCAN-212ENST00000515397 HOXC9P31274 260 aa15.91■□□□□ 0.14
VCAN-212ENST00000515397 PANK3Q9H999 370 aa15.91■□□□□ 0.14
VCAN-212ENST00000515397 APBA3O96018 575 aa15.9■□□□□ 0.14
VCAN-212ENST00000515397 PTF1AQ7RTS3 328 aa15.9■□□□□ 0.14
VCAN-212ENST00000515397 MARCH10Q8NA82 808 aaPredicted RBP15.9■□□□□ 0.14
VCAN-212ENST00000515397 EXOC5O00471 708 aa15.89■□□□□ 0.13
VCAN-212ENST00000515397 TNNT2P45379 298 aaPredicted RBP15.89■□□□□ 0.13
VCAN-212ENST00000515397 BAG6P46379 1132 aa15.89■□□□□ 0.13
VCAN-212ENST00000515397 EZH2Q15910 746 aaKnown RBP15.89■□□□□ 0.13
VCAN-212ENST00000515397 PPM1GO15355 546 aaPredicted RBP15.88■□□□□ 0.13
VCAN-212ENST00000515397 HSP90AB2PQ58FF8 381 aa15.87■□□□□ 0.13
VCAN-212ENST00000515397 USHBP1Q8N6Y0 703 aa15.87■□□□□ 0.13
VCAN-212ENST00000515397 EMILIN1Q9Y6C2 1016 aa15.87■□□□□ 0.13
VCAN-212ENST00000515397 MYOM1P52179 1685 aa15.86■□□□□ 0.13
VCAN-212ENST00000515397 USP54Q70EL1 1684 aa15.86■□□□□ 0.13
VCAN-212ENST00000515397 LTN1O94822 1766 aa15.86■□□□□ 0.13
VCAN-212ENST00000515397 CCDC7Q96M83 1385 aa15.86■□□□□ 0.13
VCAN-212ENST00000515397 PSDA5PKW4 1024 aaPredicted RBP15.85■□□□□ 0.13
VCAN-212ENST00000515397 IL2RBP14784 551 aa15.85■□□□□ 0.13
VCAN-212ENST00000515397 CDCA7Q9BWT1 371 aaPredicted RBP15.85■□□□□ 0.13
VCAN-212ENST00000515397 CGNL1Q0VF96 1302 aa15.85■□□□□ 0.13
VCAN-212ENST00000515397 DISP2A7MBM2 1401 aa15.85■□□□□ 0.13
VCAN-212ENST00000515397 NBPF6Q5VWK0 638 aa15.84■□□□□ 0.13
VCAN-212ENST00000515397 DDX54Q8TDD1 881 aaKnown RBP15.84■□□□□ 0.13
VCAN-212ENST00000515397 ACSBG1Q96GR2 724 aa15.84■□□□□ 0.13
VCAN-212ENST00000515397 NBPF4Q96M43 638 aa15.84■□□□□ 0.13
VCAN-212ENST00000515397 CAMKK2Q96RR4 588 aa15.84■□□□□ 0.13
VCAN-212ENST00000515397 KIF7Q2M1P5 1343 aa15.84■□□□□ 0.13
VCAN-212ENST00000515397 CNGB1Q14028 1251 aaPredicted RBP15.83■□□□□ 0.12
VCAN-212ENST00000515397 KCNQ2O43526 872 aa15.82■□□□□ 0.12
VCAN-212ENST00000515397 OVOS2A0A0G2JMS6 1433 aa15.81■□□□□ 0.12
VCAN-212ENST00000515397 POLKQ9UBT6 870 aa15.81■□□□□ 0.12
VCAN-212ENST00000515397 PARP4Q9UKK3 1724 aaKnown RBP15.81■□□□□ 0.12
VCAN-212ENST00000515397 LRRC37A3O60309 1634 aa15.8■□□□□ 0.12
VCAN-212ENST00000515397 ABCC6O95255 1503 aa15.8■□□□□ 0.12
VCAN-212ENST00000515397 R3HDM1Q15032 1099 aaKnown RBP15.79■□□□□ 0.12
VCAN-212ENST00000515397 KNSTRNQ9Y448 316 aa15.79■□□□□ 0.12
VCAN-212ENST00000515397 SRCAPQ6ZRS2 3230 aa15.79■□□□□ 0.12
VCAN-212ENST00000515397 KIF20BQ96Q89 1820 aa15.78■□□□□ 0.12
VCAN-212ENST00000515397 MORC1Q86VD1 984 aa15.78■□□□□ 0.12
VCAN-212ENST00000515397 BCL11BQ9C0K0 894 aaPredicted RBP15.78■□□□□ 0.12
VCAN-212ENST00000515397 INSRP06213 1382 aa15.77■□□□□ 0.12
VCAN-212ENST00000515397 RGPD1P0DJD0 1748 aa15.77■□□□□ 0.11
VCAN-212ENST00000515397 PEAK1Q9H792 1746 aa15.77■□□□□ 0.11
VCAN-212ENST00000515397 RTL1A6NKG5 1358 aa15.76■□□□□ 0.11
VCAN-212ENST00000515397 FLT4P35916 1363 aa15.76■□□□□ 0.11
VCAN-212ENST00000515397 ZCRB1Q8TBF4 217 aaKnown RBP15.76■□□□□ 0.11
VCAN-212ENST00000515397 RGPD2P0DJD1 1756 aa15.76■□□□□ 0.11
VCAN-212ENST00000515397 TNS1Q9HBL0 1735 aaKnown RBP15.76■□□□□ 0.11
VCAN-212ENST00000515397 TNS2Q63HR2 1409 aa15.76■□□□□ 0.11
VCAN-212ENST00000515397 WASHC2AQ641Q2 1341 aa15.75■□□□□ 0.11
VCAN-212ENST00000515397 PROM2Q8N271 834 aa15.75■□□□□ 0.11
VCAN-212ENST00000515397 KAT6BQ8WYB5 2073 aa15.74■□□□□ 0.11
VCAN-212ENST00000515397 WNK3Q9BYP7 1800 aa15.74■□□□□ 0.11
VCAN-212ENST00000515397 RAPGEF4Q8WZA2 1011 aa15.74■□□□□ 0.11
VCAN-212ENST00000515397 EYA1Q99502 592 aa15.74■□□□□ 0.11
VCAN-212ENST00000515397 MEGF6O75095 1541 aa15.73■□□□□ 0.11
VCAN-212ENST00000515397 TATP17735 454 aaPredicted RBP15.73■□□□□ 0.11
VCAN-212ENST00000515397 AMER1Q5JTC6 1135 aaPredicted RBP15.73■□□□□ 0.11
VCAN-212ENST00000515397 CC2D1BQ5T0F9 858 aaKnown RBP15.73■□□□□ 0.11
VCAN-212ENST00000515397 SYTL4Q96C24 671 aaPredicted RBP15.73■□□□□ 0.11
VCAN-212ENST00000515397 SMG6Q86US8 1419 aaKnown RBP15.73■□□□□ 0.11
VCAN-212ENST00000515397 PLSCR1O15162 318 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms