RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 TTC21AQ8NDW8 1320 aa21.53■■□□□ 1.04
DDR1-278ENST00000515233 PLSCR1O15162 318 aa21.52■■□□□ 1.04
DDR1-278ENST00000515233 AKAP12Q02952 1782 aa21.51■■□□□ 1.03
DDR1-278ENST00000515233 NEUROD1Q13562 356 aa21.51■■□□□ 1.03
DDR1-278ENST00000515233 CDCA7Q9BWT1 371 aaPredicted RBP21.51■■□□□ 1.03
DDR1-278ENST00000515233 CPSF1Q10570 1443 aaKnown RBP21.51■■□□□ 1.03
DDR1-278ENST00000515233 LRRC37A3O60309 1634 aa21.5■■□□□ 1.03
DDR1-278ENST00000515233 SBF2Q86WG5 1849 aa21.5■■□□□ 1.03
DDR1-278ENST00000515233 BCL9O00512 1426 aa21.47■■□□□ 1.03
DDR1-278ENST00000515233 RGPD3A6NKT7 1758 aaPredicted RBP21.47■■□□□ 1.03
DDR1-278ENST00000515233 RGPD4Q7Z3J3 1758 aa21.47■■□□□ 1.03
DDR1-278ENST00000515233 CARD10Q9BWT7 1032 aa21.47■■□□□ 1.03
DDR1-278ENST00000515233 BCL11BQ9C0K0 894 aaPredicted RBP21.47■■□□□ 1.03
DDR1-278ENST00000515233 KTN1Q86UP2 1357 aaKnown RBP21.47■■□□□ 1.03
DDR1-278ENST00000515233 SBNO2Q9Y2G9 1366 aa21.47■■□□□ 1.03
DDR1-278ENST00000515233 RGPD5Q99666 1765 aa21.46■■□□□ 1.03
DDR1-278ENST00000515233 MARCH10Q8NA82 808 aaPredicted RBP21.46■■□□□ 1.03
DDR1-278ENST00000515233 WNK3Q9BYP7 1800 aa21.45■■□□□ 1.03
DDR1-278ENST00000515233 SPON1Q9HCB6 807 aa21.43■■□□□ 1.02
DDR1-278ENST00000515233 NFAT5O94916 1531 aa21.43■■□□□ 1.02
DDR1-278ENST00000515233 EXOC5O00471 708 aa21.42■■□□□ 1.02
DDR1-278ENST00000515233 SOX12O15370 315 aa21.42■■□□□ 1.02
DDR1-278ENST00000515233 KCNQ2O43526 872 aa21.42■■□□□ 1.02
DDR1-278ENST00000515233 ABCC6O95255 1503 aa21.42■■□□□ 1.02
DDR1-278ENST00000515233 CSB-PGBD3P0DP91 1061 aa21.42■■□□□ 1.02
DDR1-278ENST00000515233 USP31Q70CQ4 1352 aa21.42■■□□□ 1.02
DDR1-278ENST00000515233 PTF1AQ7RTS3 328 aa21.42■■□□□ 1.02
DDR1-278ENST00000515233 MON2Q7Z3U7 1717 aa21.41■■□□□ 1.02
DDR1-278ENST00000515233 CCDC7Q96M83 1385 aa21.41■■□□□ 1.02
DDR1-278ENST00000515233 PROM2Q8N271 834 aa21.4■■□□□ 1.02
DDR1-278ENST00000515233 CARD11Q9BXL7 1154 aa21.39■■□□□ 1.01
DDR1-278ENST00000515233 USP54Q70EL1 1684 aa21.38■■□□□ 1.01
DDR1-278ENST00000515233 CD163L1Q9NR16 1453 aa21.38■■□□□ 1.01
DDR1-278ENST00000515233 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.37■■□□□ 1.01
DDR1-278ENST00000515233 PUS7Q96PZ0 661 aaKnown RBP21.36■■□□□ 1.01
DDR1-278ENST00000515233 ANO8Q9HCE9 1232 aaPredicted RBP21.36■■□□□ 1.01
DDR1-278ENST00000515233 PPP1R1BQ9UD71 204 aaPredicted RBP21.36■■□□□ 1.01
DDR1-278ENST00000515233 SLC12A5Q9H2X9 1139 aa21.35■■□□□ 1.01
DDR1-278ENST00000515233 ERBB3P21860 1342 aa21.34■■□□□ 1.01
DDR1-278ENST00000515233 HDGFL2Q7Z4V5 671 aaPredicted RBP21.34■■□□□ 1.01
DDR1-278ENST00000515233 NME9Q86XW9 330 aa21.34■■□□□ 1.01
DDR1-278ENST00000515233 TNS2Q63HR2 1409 aa21.33■■□□□ 1.01
DDR1-278ENST00000515233 TXNRD1Q16881 649 aa21.33■■□□□ 1.01
DDR1-278ENST00000515233 TMC1Q8TDI8 760 aa21.33■■□□□ 1.01
DDR1-278ENST00000515233 NINLQ9Y2I6 1382 aa21.33■■□□□ 1
DDR1-278ENST00000515233 CASZ1Q86V15 1759 aa21.33■■□□□ 1
DDR1-278ENST00000515233 EDC4Q6P2E9 1401 aaKnown RBP21.31■■□□□ 1
DDR1-278ENST00000515233 TERF2IPQ9NYB0 399 aa21.31■■□□□ 1
DDR1-278ENST00000515233 LTN1O94822 1766 aa21.31■■□□□ 1
DDR1-278ENST00000515233 IL2RBP14784 551 aa21.3■■□□□ 1
DDR1-278ENST00000515233 NLRP2Q9NX02 1062 aa21.3■■□□□ 1
DDR1-278ENST00000515233 SLC15A2Q16348 729 aa21.29■■□□□ 1
DDR1-278ENST00000515233 PDGFDQ9GZP0 370 aaPredicted RBP21.29■■□□□ 1
DDR1-278ENST00000515233 STK32BQ9NY57 414 aa21.29■■□□□ 1
DDR1-278ENST00000515233 ANKRD24Q8TF21 1146 aa21.28■■□□□ 1
DDR1-278ENST00000515233 A0A1W2PP64 1363 aa21.27■■□□□ 1
DDR1-278ENST00000515233 TONSLQ96HA7 1378 aa21.27■■□□□ 1
DDR1-278ENST00000515233 DCAF8L1A6NGE4 600 aa21.27■■□□□ 1
DDR1-278ENST00000515233 NHSQ6T4R5 1651 aa21.27■■□□□ 1
DDR1-278ENST00000515233 YY1P25490 414 aa21.26■□□□□ 0.99
DDR1-278ENST00000515233 SLC24A1O60721 1099 aa21.25■□□□□ 0.99
DDR1-278ENST00000515233 PTGER2P43116 358 aa21.25■□□□□ 0.99
DDR1-278ENST00000515233 ACSBG1Q96GR2 724 aa21.25■□□□□ 0.99
DDR1-278ENST00000515233 ZBTB7AO95365 584 aa21.24■□□□□ 0.99
DDR1-278ENST00000515233 IP6K1Q92551 441 aa21.24■□□□□ 0.99
DDR1-278ENST00000515233 TESK2Q96S53 571 aa21.24■□□□□ 0.99
DDR1-278ENST00000515233 ST20-MTHFSA0A0A6YYL1 179 aa21.21■□□□□ 0.99
DDR1-278ENST00000515233 MTFR1LQ9H019 292 aa21.21■□□□□ 0.99
DDR1-278ENST00000515233 ATF5Q9Y2D1 282 aaPredicted RBP21.21■□□□□ 0.99
DDR1-278ENST00000515233 SGIP1Q9BQI5 828 aa21.19■□□□□ 0.98
DDR1-278ENST00000515233 BTAF1O14981 1849 aa21.19■□□□□ 0.98
DDR1-278ENST00000515233 COG3Q96JB2 828 aa21.18■□□□□ 0.98
DDR1-278ENST00000515233 FAM208AQ9UK61 1670 aaKnown RBP21.18■□□□□ 0.98
DDR1-278ENST00000515233 PAPPAQ13219 1627 aa21.17■□□□□ 0.98
DDR1-278ENST00000515233 MYOM1P52179 1685 aa21.17■□□□□ 0.98
DDR1-278ENST00000515233 KAT6BQ8WYB5 2073 aa21.17■□□□□ 0.98
DDR1-278ENST00000515233 SYT17Q9BSW7 474 aa21.16■□□□□ 0.98
DDR1-278ENST00000515233 MAP3K19Q56UN5 1328 aa21.15■□□□□ 0.98
DDR1-278ENST00000515233 HOXC9P31274 260 aa21.15■□□□□ 0.98
DDR1-278ENST00000515233 LRRC4BQ9NT99 713 aa21.15■□□□□ 0.98
DDR1-278ENST00000515233 DDX54Q8TDD1 881 aaKnown RBP21.14■□□□□ 0.97
DDR1-278ENST00000515233 LTV1Q96GA3 475 aaPredicted RBP21.14■□□□□ 0.97
DDR1-278ENST00000515233 FHDC1Q9C0D6 1143 aaPredicted RBP21.14■□□□□ 0.97
DDR1-278ENST00000515233 AMPHP49418 695 aa21.13■□□□□ 0.97
DDR1-278ENST00000515233 SLC27A3Q5K4L6 730 aa21.13■□□□□ 0.97
DDR1-278ENST00000515233 ANKRD36BQ8N2N9 1353 aa21.12■□□□□ 0.97
DDR1-278ENST00000515233 FBLN1P23142 703 aa21.12■□□□□ 0.97
DDR1-278ENST00000515233 ZNF827Q17R98 1081 aa21.11■□□□□ 0.97
DDR1-278ENST00000515233 AKT1S1Q96B36 256 aa21.11■□□□□ 0.97
DDR1-278ENST00000515233 ARXQ96QS3 562 aa21.1■□□□□ 0.97
DDR1-278ENST00000515233 FYB1O15117 783 aa21.09■□□□□ 0.97
DDR1-278ENST00000515233 ZCRB1Q8TBF4 217 aaKnown RBP21.09■□□□□ 0.97
DDR1-278ENST00000515233 SLC16A10Q8TF71 515 aa21.09■□□□□ 0.97
DDR1-278ENST00000515233 TMF1P82094 1093 aa21.08■□□□□ 0.97
DDR1-278ENST00000515233 RTL1A6NKG5 1358 aa21.08■□□□□ 0.96
DDR1-278ENST00000515233 MAP3K5Q99683 1374 aa21.08■□□□□ 0.96
DDR1-278ENST00000515233 RGPD2P0DJD1 1756 aa21.08■□□□□ 0.96
DDR1-278ENST00000515233 QSER1Q2KHR3 1735 aa21.07■□□□□ 0.96
DDR1-278ENST00000515233 PRIM1P49642 420 aaKnown RBP21.07■□□□□ 0.96
DDR1-278ENST00000515233 NBPF6Q5VWK0 638 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms