RNA–Protein interactions for RNA: ENST00000515198.5

PTCD2-210, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-210ENST00000515198 SPATA31A1Q5TZJ5 1347 aa17.25■□□□□ 0.35
PTCD2-210ENST00000515198 NSD3Q9BZ95 1437 aa17.25■□□□□ 0.35
PTCD2-210ENST00000515198 A0A0G2JS52 829 aa17.25■□□□□ 0.35
PTCD2-210ENST00000515198 MYT1Q01538 1121 aa17.25■□□□□ 0.35
PTCD2-210ENST00000515198 FYB1O15117 783 aa17.24■□□□□ 0.35
PTCD2-210ENST00000515198 ONECUT3O60422 494 aaPredicted RBP17.24■□□□□ 0.35
PTCD2-210ENST00000515198 FAM98CQ17RN3 349 aaKnown RBP17.24■□□□□ 0.35
PTCD2-210ENST00000515198 SEPT12Q8IYM1 358 aa17.24■□□□□ 0.35
PTCD2-210ENST00000515198 CARD14Q9BXL6 1004 aa17.24■□□□□ 0.35
PTCD2-210ENST00000515198 BRWD3Q6RI45 1802 aa17.24■□□□□ 0.35
PTCD2-210ENST00000515198 C11orf95C9JLR9 678 aaPredicted RBP17.23■□□□□ 0.35
PTCD2-210ENST00000515198 LARP1Q6PKG0 1096 aaKnown RBP17.23■□□□□ 0.35
PTCD2-210ENST00000515198 GGNBP2Q9H3C7 697 aa17.23■□□□□ 0.35
PTCD2-210ENST00000515198 CRB1P82279 1406 aa17.22■□□□□ 0.35
PTCD2-210ENST00000515198 USP35Q9P2H5 1018 aa17.22■□□□□ 0.35
PTCD2-210ENST00000515198 AXIN2Q9Y2T1 843 aa17.22■□□□□ 0.35
PTCD2-210ENST00000515198 CGNL1Q0VF96 1302 aa17.21■□□□□ 0.35
PTCD2-210ENST00000515198 THRAP3Q9Y2W1 955 aaKnown RBP17.21■□□□□ 0.35
PTCD2-210ENST00000515198 KIF7Q2M1P5 1343 aa17.21■□□□□ 0.34
PTCD2-210ENST00000515198 THSD7AQ9UPZ6 1657 aa17.2■□□□□ 0.34
PTCD2-210ENST00000515198 CSB-PGBD3P0DP91 1061 aa17.2■□□□□ 0.34
PTCD2-210ENST00000515198 TOM1L2Q6ZVM7 507 aa17.2■□□□□ 0.34
PTCD2-210ENST00000515198 TCP11L2Q8N4U5 519 aa17.2■□□□□ 0.34
PTCD2-210ENST00000515198 PANK3Q9H999 370 aa17.2■□□□□ 0.34
PTCD2-210ENST00000515198 WDR17Q8IZU2 1322 aa17.2■□□□□ 0.34
PTCD2-210ENST00000515198 BARGINQ6ZT62 677 aa17.19■□□□□ 0.34
PTCD2-210ENST00000515198 KRT27Q7Z3Y8 459 aa17.18■□□□□ 0.34
PTCD2-210ENST00000515198 UPF1Q92900 1129 aaKnown RBP eCLIP17.18■□□□□ 0.34
PTCD2-210ENST00000515198 BLMP54132 1417 aaPredicted RBP17.17■□□□□ 0.34
PTCD2-210ENST00000515198 ANKRD26Q9UPS8 1709 aa17.17■□□□□ 0.34
PTCD2-210ENST00000515198 MAP3K19Q56UN5 1328 aa17.17■□□□□ 0.34
PTCD2-210ENST00000515198 AMPHP49418 695 aa17.16■□□□□ 0.34
PTCD2-210ENST00000515198 IP6K1Q92551 441 aa17.16■□□□□ 0.34
PTCD2-210ENST00000515198 ERBB3P21860 1342 aa17.15■□□□□ 0.34
PTCD2-210ENST00000515198 RTL1A6NKG5 1358 aa17.15■□□□□ 0.34
PTCD2-210ENST00000515198 WNK3Q9BYP7 1800 aa17.14■□□□□ 0.34
PTCD2-210ENST00000515198 FAM208AQ9UK61 1670 aaKnown RBP17.14■□□□□ 0.33
PTCD2-210ENST00000515198 PARP4Q9UKK3 1724 aaKnown RBP17.14■□□□□ 0.33
PTCD2-210ENST00000515198 FBLN1P23142 703 aa17.14■□□□□ 0.33
PTCD2-210ENST00000515198 ANKRD24Q8TF21 1146 aa17.14■□□□□ 0.33
PTCD2-210ENST00000515198 CARD10Q9BWT7 1032 aa17.14■□□□□ 0.33
PTCD2-210ENST00000515198 KNSTRNQ9Y448 316 aa17.14■□□□□ 0.33
PTCD2-210ENST00000515198 NSD2O96028 1365 aa17.14■□□□□ 0.33
PTCD2-210ENST00000515198 CCDC7Q96M83 1385 aa17.14■□□□□ 0.33
PTCD2-210ENST00000515198 HOXC9P31274 260 aa17.13■□□□□ 0.33
PTCD2-210ENST00000515198 MAPK8IP2Q13387 824 aaPredicted RBP17.13■□□□□ 0.33
PTCD2-210ENST00000515198 RRS1Q15050 365 aaKnown RBP17.13■□□□□ 0.33
PTCD2-210ENST00000515198 PDE3BQ13370 1112 aa17.12■□□□□ 0.33
PTCD2-210ENST00000515198 CDCA7Q9BWT1 371 aaPredicted RBP17.12■□□□□ 0.33
PTCD2-210ENST00000515198 NLRP2Q9NX02 1062 aa17.12■□□□□ 0.33
PTCD2-210ENST00000515198 CCDC125Q86Z20 511 aa17.11■□□□□ 0.33
PTCD2-210ENST00000515198 WASHC2AQ641Q2 1341 aa17.11■□□□□ 0.33
PTCD2-210ENST00000515198 KIF24Q5T7B8 1368 aa17.11■□□□□ 0.33
PTCD2-210ENST00000515198 MAP2P11137 1827 aaKnown RBP17.1■□□□□ 0.33
PTCD2-210ENST00000515198 LTV1Q96GA3 475 aaPredicted RBP17.1■□□□□ 0.33
PTCD2-210ENST00000515198 FLT4P35916 1363 aa17.09■□□□□ 0.33
PTCD2-210ENST00000515198 SMG6Q86US8 1419 aaKnown RBP17.09■□□□□ 0.33
PTCD2-210ENST00000515198 LRRC37A3O60309 1634 aa17.09■□□□□ 0.33
PTCD2-210ENST00000515198 PEAK1Q9H792 1746 aa17.09■□□□□ 0.33
PTCD2-210ENST00000515198 DDB1Q16531 1140 aa17.08■□□□□ 0.32
PTCD2-210ENST00000515198 INSRP06213 1382 aa17.07■□□□□ 0.32
PTCD2-210ENST00000515198 SF3B2Q13435 895 aaKnown RBP17.07■□□□□ 0.32
PTCD2-210ENST00000515198 EMILIN1Q9Y6C2 1016 aa17.07■□□□□ 0.32
PTCD2-210ENST00000515198 DISP2A7MBM2 1401 aa17.06■□□□□ 0.32
PTCD2-210ENST00000515198 PPM1GO15355 546 aaPredicted RBP17.06■□□□□ 0.32
PTCD2-210ENST00000515198 ZEB1P37275 1124 aaPredicted RBP17.06■□□□□ 0.32
PTCD2-210ENST00000515198 TNNT2P45379 298 aaPredicted RBP17.06■□□□□ 0.32
PTCD2-210ENST00000515198 FAM182BQ5T319 152 aa17.06■□□□□ 0.32
PTCD2-210ENST00000515198 FAM196AQ6ZSG2 479 aa17.06■□□□□ 0.32
PTCD2-210ENST00000515198 MORC1Q86VD1 984 aa17.06■□□□□ 0.32
PTCD2-210ENST00000515198 RGPD2P0DJD1 1756 aa17.06■□□□□ 0.32
PTCD2-210ENST00000515198 IL2RBP14784 551 aa17.05■□□□□ 0.32
PTCD2-210ENST00000515198 RGPD1P0DJD0 1748 aa17.04■□□□□ 0.32
PTCD2-210ENST00000515198 EXOC5O00471 708 aa17.04■□□□□ 0.32
PTCD2-210ENST00000515198 HSP90AB2PQ58FF8 381 aa17.04■□□□□ 0.32
PTCD2-210ENST00000515198 AMER1Q5JTC6 1135 aaPredicted RBP17.04■□□□□ 0.32
PTCD2-210ENST00000515198 POLKQ9UBT6 870 aa17.04■□□□□ 0.32
PTCD2-210ENST00000515198 PER1O15534 1290 aaPredicted RBP17.03■□□□□ 0.32
PTCD2-210ENST00000515198 OVOS2A0A0G2JMS6 1433 aa17.02■□□□□ 0.31
PTCD2-210ENST00000515198 TNS2Q63HR2 1409 aa17.02■□□□□ 0.31
PTCD2-210ENST00000515198 NBPF6Q5VWK0 638 aa17■□□□□ 0.31
PTCD2-210ENST00000515198 NBPF4Q96M43 638 aa17■□□□□ 0.31
PTCD2-210ENST00000515198 BAG6P46379 1132 aa16.99■□□□□ 0.31
PTCD2-210ENST00000515198 CC2D1BQ5T0F9 858 aaKnown RBP16.99■□□□□ 0.31
PTCD2-210ENST00000515198 NPC1L1Q9UHC9 1359 aa16.99■□□□□ 0.31
PTCD2-210ENST00000515198 TNS1Q9HBL0 1735 aaKnown RBP16.99■□□□□ 0.31
PTCD2-210ENST00000515198 TRIM37O94972 964 aa16.98■□□□□ 0.31
PTCD2-210ENST00000515198 MARCH10Q8NA82 808 aaPredicted RBP16.98■□□□□ 0.31
PTCD2-210ENST00000515198 USHBP1Q8N6Y0 703 aa16.97■□□□□ 0.31
PTCD2-210ENST00000515198 RAPGEF4Q8WZA2 1011 aa16.97■□□□□ 0.31
PTCD2-210ENST00000515198 SBF2Q86WG5 1849 aa16.97■□□□□ 0.31
PTCD2-210ENST00000515198 EP400Q96L91 3159 aa16.97■□□□□ 0.31
PTCD2-210ENST00000515198 DEFB132Q7Z7B7 95 aa16.96■□□□□ 0.31
PTCD2-210ENST00000515198 BCL9O00512 1426 aa16.96■□□□□ 0.3
PTCD2-210ENST00000515198 TATP17735 454 aaPredicted RBP16.95■□□□□ 0.3
PTCD2-210ENST00000515198 MEGF6O75095 1541 aa16.95■□□□□ 0.3
PTCD2-210ENST00000515198 CNGB1Q14028 1251 aaPredicted RBP16.94■□□□□ 0.3
PTCD2-210ENST00000515198 EIF4A2Q14240 407 aaKnown RBP16.94■□□□□ 0.3
PTCD2-210ENST00000515198 APBA3O96018 575 aa16.93■□□□□ 0.3
PTCD2-210ENST00000515198 ZCRB1Q8TBF4 217 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms