RNA–Protein interactions for RNA: ENST00000515180.5

CDK7-212, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-212ENST00000515180 BLMP54132 1417 aaPredicted RBP18.27■□□□□ 0.52
CDK7-212ENST00000515180 TOM1L2Q6ZVM7 507 aa18.27■□□□□ 0.52
CDK7-212ENST00000515180 DEFB132Q7Z7B7 95 aa18.27■□□□□ 0.52
CDK7-212ENST00000515180 CRB1P82279 1406 aa18.26■□□□□ 0.51
CDK7-212ENST00000515180 USP54Q70EL1 1684 aa18.26■□□□□ 0.51
CDK7-212ENST00000515180 ANKRD36BQ8N2N9 1353 aa18.25■□□□□ 0.51
CDK7-212ENST00000515180 CSB-PGBD3P0DP91 1061 aa18.24■□□□□ 0.51
CDK7-212ENST00000515180 FBLN1P23142 703 aa18.24■□□□□ 0.51
CDK7-212ENST00000515180 WDR17Q8IZU2 1322 aa18.23■□□□□ 0.51
CDK7-212ENST00000515180 OVOS2A0A0J9YW53 1432 aa18.23■□□□□ 0.51
CDK7-212ENST00000515180 OVOS2Q6IE36 1432 aa18.23■□□□□ 0.51
CDK7-212ENST00000515180 HSPA5P11021 654 aaKnown RBP18.23■□□□□ 0.51
CDK7-212ENST00000515180 SF3B2Q13435 895 aaKnown RBP18.23■□□□□ 0.51
CDK7-212ENST00000515180 CDCA8Q53HL2 280 aa18.23■□□□□ 0.51
CDK7-212ENST00000515180 THRAP3Q9Y2W1 955 aaKnown RBP18.23■□□□□ 0.51
CDK7-212ENST00000515180 PDE3BQ13370 1112 aa18.22■□□□□ 0.51
CDK7-212ENST00000515180 POLR3GLQ9BT43 218 aa18.22■□□□□ 0.51
CDK7-212ENST00000515180 LTN1O94822 1766 aa18.22■□□□□ 0.51
CDK7-212ENST00000515180 EIF4G2P78344 907 aaKnown RBP eCLIP18.21■□□□□ 0.51
CDK7-212ENST00000515180 COG3Q96JB2 828 aa18.21■□□□□ 0.51
CDK7-212ENST00000515180 GGNBP2Q9H3C7 697 aa18.21■□□□□ 0.51
CDK7-212ENST00000515180 MYOM1P52179 1685 aa18.19■□□□□ 0.5
CDK7-212ENST00000515180 FYB1O15117 783 aa18.19■□□□□ 0.5
CDK7-212ENST00000515180 TRIM37O94972 964 aa18.19■□□□□ 0.5
CDK7-212ENST00000515180 CARD14Q9BXL6 1004 aa18.19■□□□□ 0.5
CDK7-212ENST00000515180 PARP4Q9UKK3 1724 aaKnown RBP18.18■□□□□ 0.5
CDK7-212ENST00000515180 FAM196AQ6ZSG2 479 aa18.18■□□□□ 0.5
CDK7-212ENST00000515180 CARD10Q9BWT7 1032 aa18.18■□□□□ 0.5
CDK7-212ENST00000515180 EP400Q96L91 3159 aa18.18■□□□□ 0.5
CDK7-212ENST00000515180 EN1Q05925 392 aaPredicted RBP18.17■□□□□ 0.5
CDK7-212ENST00000515180 BAG6P46379 1132 aa18.16■□□□□ 0.5
CDK7-212ENST00000515180 DDB1Q16531 1140 aa18.16■□□□□ 0.5
CDK7-212ENST00000515180 ANKRD24Q8TF21 1146 aa18.16■□□□□ 0.5
CDK7-212ENST00000515180 LTV1Q96GA3 475 aaPredicted RBP18.16■□□□□ 0.5
CDK7-212ENST00000515180 NLRP2Q9NX02 1062 aa18.16■□□□□ 0.5
CDK7-212ENST00000515180 MAP3K19Q56UN5 1328 aa18.16■□□□□ 0.5
CDK7-212ENST00000515180 RGPD1P0DJD0 1748 aa18.15■□□□□ 0.5
CDK7-212ENST00000515180 ABCC6O95255 1503 aa18.15■□□□□ 0.5
CDK7-212ENST00000515180 WNK3Q9BYP7 1800 aa18.15■□□□□ 0.5
CDK7-212ENST00000515180 IP6K1Q92551 441 aa18.15■□□□□ 0.5
CDK7-212ENST00000515180 ERBB3P21860 1342 aa18.15■□□□□ 0.5
CDK7-212ENST00000515180 LRRC37A3O60309 1634 aa18.15■□□□□ 0.5
CDK7-212ENST00000515180 NSD3Q9BZ95 1437 aa18.15■□□□□ 0.5
CDK7-212ENST00000515180 RRS1Q15050 365 aaKnown RBP18.14■□□□□ 0.49
CDK7-212ENST00000515180 TNS1Q9HBL0 1735 aaKnown RBP18.14■□□□□ 0.49
CDK7-212ENST00000515180 KIF20BQ96Q89 1820 aa18.13■□□□□ 0.49
CDK7-212ENST00000515180 DISP2A7MBM2 1401 aa18.13■□□□□ 0.49
CDK7-212ENST00000515180 C11orf95C9JLR9 678 aaPredicted RBP18.12■□□□□ 0.49
CDK7-212ENST00000515180 HOXC9P31274 260 aa18.12■□□□□ 0.49
CDK7-212ENST00000515180 AMPHP49418 695 aa18.12■□□□□ 0.49
CDK7-212ENST00000515180 CCDC7Q96M83 1385 aa18.12■□□□□ 0.49
CDK7-212ENST00000515180 APBA3O96018 575 aa18.11■□□□□ 0.49
CDK7-212ENST00000515180 EZH2Q15910 746 aaKnown RBP18.11■□□□□ 0.49
CDK7-212ENST00000515180 MARCH10Q8NA82 808 aaPredicted RBP18.11■□□□□ 0.49
CDK7-212ENST00000515180 CDCA7Q9BWT1 371 aaPredicted RBP18.11■□□□□ 0.49
CDK7-212ENST00000515180 PEAK1Q9H792 1746 aa18.09■□□□□ 0.49
CDK7-212ENST00000515180 EXOC5O00471 708 aa18.09■□□□□ 0.49
CDK7-212ENST00000515180 OVOS2A0A0G2JMS6 1433 aa18.08■□□□□ 0.49
CDK7-212ENST00000515180 PTF1AQ7RTS3 328 aa18.08■□□□□ 0.48
CDK7-212ENST00000515180 RGPD2P0DJD1 1756 aa18.07■□□□□ 0.48
CDK7-212ENST00000515180 IL2RBP14784 551 aa18.07■□□□□ 0.48
CDK7-212ENST00000515180 CAMKK2Q96RR4 588 aa18.07■□□□□ 0.48
CDK7-212ENST00000515180 PANK3Q9H999 370 aa18.06■□□□□ 0.48
CDK7-212ENST00000515180 SBF2Q86WG5 1849 aa18.05■□□□□ 0.48
CDK7-212ENST00000515180 PSDA5PKW4 1024 aaPredicted RBP18.05■□□□□ 0.48
CDK7-212ENST00000515180 HSP90AB2PQ58FF8 381 aa18.05■□□□□ 0.48
CDK7-212ENST00000515180 CGNL1Q0VF96 1302 aa18.04■□□□□ 0.48
CDK7-212ENST00000515180 EMILIN1Q9Y6C2 1016 aa18.04■□□□□ 0.48
CDK7-212ENST00000515180 TNS2Q63HR2 1409 aa18.04■□□□□ 0.48
CDK7-212ENST00000515180 USHBP1Q8N6Y0 703 aa18.03■□□□□ 0.48
CDK7-212ENST00000515180 RTL1A6NKG5 1358 aa18.03■□□□□ 0.48
CDK7-212ENST00000515180 NBPF6Q5VWK0 638 aa18.02■□□□□ 0.48
CDK7-212ENST00000515180 NBPF4Q96M43 638 aa18.02■□□□□ 0.48
CDK7-212ENST00000515180 FAM208AQ9UK61 1670 aaKnown RBP18.02■□□□□ 0.47
CDK7-212ENST00000515180 PPM1GO15355 546 aaPredicted RBP18.01■□□□□ 0.47
CDK7-212ENST00000515180 TNNT2P45379 298 aaPredicted RBP18.01■□□□□ 0.47
CDK7-212ENST00000515180 ACSBG1Q96GR2 724 aa18.01■□□□□ 0.47
CDK7-212ENST00000515180 KIF7Q2M1P5 1343 aa18■□□□□ 0.47
CDK7-212ENST00000515180 KCNQ2O43526 872 aa18■□□□□ 0.47
CDK7-212ENST00000515180 BCL11BQ9C0K0 894 aaPredicted RBP18■□□□□ 0.47
CDK7-212ENST00000515180 R3HDM1Q15032 1099 aaKnown RBP17.99■□□□□ 0.47
CDK7-212ENST00000515180 DDX54Q8TDD1 881 aaKnown RBP17.99■□□□□ 0.47
CDK7-212ENST00000515180 INSRP06213 1382 aa17.99■□□□□ 0.47
CDK7-212ENST00000515180 FLT4P35916 1363 aa17.99■□□□□ 0.47
CDK7-212ENST00000515180 BCL9O00512 1426 aa17.98■□□□□ 0.47
CDK7-212ENST00000515180 MAP2P11137 1827 aaKnown RBP17.98■□□□□ 0.47
CDK7-212ENST00000515180 RREB1Q92766 1687 aa17.97■□□□□ 0.47
CDK7-212ENST00000515180 POLKQ9UBT6 870 aa17.97■□□□□ 0.47
CDK7-212ENST00000515180 MEGF6O75095 1541 aa17.97■□□□□ 0.47
CDK7-212ENST00000515180 PARD3Q8TEW0 1356 aa17.96■□□□□ 0.47
CDK7-212ENST00000515180 NUP188Q5SRE5 1749 aa17.96■□□□□ 0.47
CDK7-212ENST00000515180 ANKRD26Q9UPS8 1709 aa17.96■□□□□ 0.47
CDK7-212ENST00000515180 SMG6Q86US8 1419 aaKnown RBP17.96■□□□□ 0.47
CDK7-212ENST00000515180 KIF24Q5T7B8 1368 aa17.95■□□□□ 0.46
CDK7-212ENST00000515180 KAT6BQ8WYB5 2073 aa17.94■□□□□ 0.46
CDK7-212ENST00000515180 PLSCR1O15162 318 aa17.94■□□□□ 0.46
CDK7-212ENST00000515180 PROM2Q8N271 834 aa17.94■□□□□ 0.46
CDK7-212ENST00000515180 ZCRB1Q8TBF4 217 aaKnown RBP17.94■□□□□ 0.46
CDK7-212ENST00000515180 WASHC2AQ641Q2 1341 aa17.94■□□□□ 0.46
CDK7-212ENST00000515180 KNSTRNQ9Y448 316 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms