RNA–Protein interactions for RNA: ENST00000515022.5

TRIM6-211, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-211ENST00000515022 BCL11BQ9C0K0 894 aaPredicted RBP12.45□□□□□ -0.42
TRIM6-211ENST00000515022 C1QTNF8P60827 252 aa12.44□□□□□ -0.42
TRIM6-211ENST00000515022 FHDC1Q9C0D6 1143 aaPredicted RBP12.44□□□□□ -0.42
TRIM6-211ENST00000515022 KDM2AQ9Y2K7 1162 aa12.44□□□□□ -0.42
TRIM6-211ENST00000515022 EIF3AQ14152 1382 aaKnown RBP12.43□□□□□ -0.42
TRIM6-211ENST00000515022 PEAK1Q9H792 1746 aa12.43□□□□□ -0.42
TRIM6-211ENST00000515022 PARP4Q9UKK3 1724 aaKnown RBP12.43□□□□□ -0.42
TRIM6-211ENST00000515022 IFFO2Q5TF58 517 aa12.43□□□□□ -0.42
TRIM6-211ENST00000515022 PROM2Q8N271 834 aa12.43□□□□□ -0.42
TRIM6-211ENST00000515022 LMO7Q8WWI1 1683 aa12.42□□□□□ -0.42
TRIM6-211ENST00000515022 ATP7BP35670 1465 aa12.42□□□□□ -0.42
TRIM6-211ENST00000515022 SYT17Q9BSW7 474 aa12.42□□□□□ -0.42
TRIM6-211ENST00000515022 CEP350Q5VT06 3117 aa12.42□□□□□ -0.42
TRIM6-211ENST00000515022 ITSN1Q15811 1721 aa12.42□□□□□ -0.42
TRIM6-211ENST00000515022 ACEP12821 1306 aa12.41□□□□□ -0.42
TRIM6-211ENST00000515022 ABTB2Q8N961 1025 aa12.41□□□□□ -0.42
TRIM6-211ENST00000515022 SSUH2Q9Y2M2 353 aa12.41□□□□□ -0.42
TRIM6-211ENST00000515022 OVOS2A0A0G2JMS6 1433 aa12.4□□□□□ -0.42
TRIM6-211ENST00000515022 OVOS2A0A0J9YW53 1432 aa12.4□□□□□ -0.42
TRIM6-211ENST00000515022 OVOS2Q6IE36 1432 aa12.4□□□□□ -0.42
TRIM6-211ENST00000515022 PLSCR1O15162 318 aa12.4□□□□□ -0.42
TRIM6-211ENST00000515022 CDK19Q9BWU1 502 aa12.4□□□□□ -0.42
TRIM6-211ENST00000515022 COL5A2P05997 1499 aaPredicted RBP12.4□□□□□ -0.43
TRIM6-211ENST00000515022 RGPD3A6NKT7 1758 aaPredicted RBP12.39□□□□□ -0.43
TRIM6-211ENST00000515022 RGPD4Q7Z3J3 1758 aa12.39□□□□□ -0.43
TRIM6-211ENST00000515022 THRAP3Q9Y2W1 955 aaKnown RBP12.39□□□□□ -0.43
TRIM6-211ENST00000515022 LRRC37A3O60309 1634 aa12.39□□□□□ -0.43
TRIM6-211ENST00000515022 GCP02774 474 aa12.38□□□□□ -0.43
TRIM6-211ENST00000515022 DDB1Q16531 1140 aa12.38□□□□□ -0.43
TRIM6-211ENST00000515022 MARCH10Q8NA82 808 aaPredicted RBP12.38□□□□□ -0.43
TRIM6-211ENST00000515022 STK32BQ9NY57 414 aa12.38□□□□□ -0.43
TRIM6-211ENST00000515022 CPDO75976 1380 aa12.38□□□□□ -0.43
TRIM6-211ENST00000515022 GOLGB1Q14789 3259 aaKnown RBP12.38□□□□□ -0.43
TRIM6-211ENST00000515022 KAT6BQ8WYB5 2073 aa12.38□□□□□ -0.43
TRIM6-211ENST00000515022 USP19O94966 1318 aa12.37□□□□□ -0.43
TRIM6-211ENST00000515022 ARHGEF28Q8N1W1 1705 aaKnown RBP12.37□□□□□ -0.43
TRIM6-211ENST00000515022 AKT1S1Q96B36 256 aa12.37□□□□□ -0.43
TRIM6-211ENST00000515022 CRB1P82279 1406 aa12.37□□□□□ -0.43
TRIM6-211ENST00000515022 POLR3AO14802 1390 aaPredicted RBP12.36□□□□□ -0.43
TRIM6-211ENST00000515022 SLC15A2Q16348 729 aa12.36□□□□□ -0.43
TRIM6-211ENST00000515022 TXNRD1Q16881 649 aa12.36□□□□□ -0.43
TRIM6-211ENST00000515022 TOM1L2Q6ZVM7 507 aa12.36□□□□□ -0.43
TRIM6-211ENST00000515022 DCAF11Q8TEB1 546 aa12.36□□□□□ -0.43
TRIM6-211ENST00000515022 TOPAZ1Q8N9V7 1692 aa12.35□□□□□ -0.43
TRIM6-211ENST00000515022 SGIP1Q9BQI5 828 aa12.35□□□□□ -0.43
TRIM6-211ENST00000515022 AKAP12Q02952 1782 aa12.35□□□□□ -0.43
TRIM6-211ENST00000515022 GPR162Q16538 588 aa12.34□□□□□ -0.43
TRIM6-211ENST00000515022 NLRP13Q86W25 1043 aa12.34□□□□□ -0.43
TRIM6-211ENST00000515022 PELP1Q8IZL8 1130 aaKnown RBP12.34□□□□□ -0.43
TRIM6-211ENST00000515022 KLHL34Q8N239 644 aa12.34□□□□□ -0.43
TRIM6-211ENST00000515022 ARXQ96QS3 562 aa12.34□□□□□ -0.43
TRIM6-211ENST00000515022 MTFR1LQ9H019 292 aa12.34□□□□□ -0.43
TRIM6-211ENST00000515022 CCDC61Q9Y6R9 512 aa12.34□□□□□ -0.43
TRIM6-211ENST00000515022 RGPD5Q99666 1765 aa12.33□□□□□ -0.44
TRIM6-211ENST00000515022 WNK3Q9BYP7 1800 aa12.33□□□□□ -0.44
TRIM6-211ENST00000515022 PLEKHG3A1L390 1219 aa12.33□□□□□ -0.44
TRIM6-211ENST00000515022 C11orf95C9JLR9 678 aaPredicted RBP12.33□□□□□ -0.44
TRIM6-211ENST00000515022 GIGYF1O75420 1035 aaPredicted RBP12.33□□□□□ -0.44
TRIM6-211ENST00000515022 AXIN2Q9Y2T1 843 aa12.33□□□□□ -0.44
TRIM6-211ENST00000515022 COL18A1P39060 1754 aa12.31□□□□□ -0.44
TRIM6-211ENST00000515022 SOX12O15370 315 aa12.31□□□□□ -0.44
TRIM6-211ENST00000515022 NLRP6P59044 892 aa12.31□□□□□ -0.44
TRIM6-211ENST00000515022 ACSBG1Q96GR2 724 aa12.31□□□□□ -0.44
TRIM6-211ENST00000515022 CABP2Q9NPB3 220 aa12.3□□□□□ -0.44
TRIM6-211ENST00000515022 AATKQ6ZMQ8 1374 aa12.3□□□□□ -0.44
TRIM6-211ENST00000515022 PPIP5K1Q6PFW1 1433 aa12.29□□□□□ -0.44
TRIM6-211ENST00000515022 SRPK2P78362 688 aaKnown RBP12.29□□□□□ -0.44
TRIM6-211ENST00000515022 ZNF827Q17R98 1081 aa12.29□□□□□ -0.44
TRIM6-211ENST00000515022 WDR17Q8IZU2 1322 aa12.29□□□□□ -0.44
TRIM6-211ENST00000515022 CSB-PGBD3P0DP91 1061 aa12.28□□□□□ -0.44
TRIM6-211ENST00000515022 SHANK3Q9BYB0 1731 aa12.28□□□□□ -0.44
TRIM6-211ENST00000515022 EXOC5O00471 708 aa12.27□□□□□ -0.45
TRIM6-211ENST00000515022 NLGN2Q8NFZ4 835 aa12.27□□□□□ -0.45
TRIM6-211ENST00000515022 CABP1Q9NZU7 370 aa12.26□□□□□ -0.45
TRIM6-211ENST00000515022 BCL9O00512 1426 aa12.26□□□□□ -0.45
TRIM6-211ENST00000515022 SLIT3O75094 1523 aa12.26□□□□□ -0.45
TRIM6-211ENST00000515022 NBPF1Q3BBV0 1214 aa12.25□□□□□ -0.45
TRIM6-211ENST00000515022 CARD10Q9BWT7 1032 aa12.25□□□□□ -0.45
TRIM6-211ENST00000515022 LRRC4BQ9NT99 713 aa12.25□□□□□ -0.45
TRIM6-211ENST00000515022 MAP3K5Q99683 1374 aa12.25□□□□□ -0.45
TRIM6-211ENST00000515022 PAPPAQ13219 1627 aa12.25□□□□□ -0.45
TRIM6-211ENST00000515022 PIK3C2AO00443 1686 aa12.25□□□□□ -0.45
TRIM6-211ENST00000515022 NHSQ6T4R5 1651 aa12.25□□□□□ -0.45
TRIM6-211ENST00000515022 BTAF1O14981 1849 aa12.25□□□□□ -0.45
TRIM6-211ENST00000515022 KCNQ4P56696 695 aa12.24□□□□□ -0.45
TRIM6-211ENST00000515022 CDCA7Q9BWT1 371 aaPredicted RBP12.24□□□□□ -0.45
TRIM6-211ENST00000515022 USP6P35125 1406 aa12.23□□□□□ -0.45
TRIM6-211ENST00000515022 CPSF1Q10570 1443 aaKnown RBP12.23□□□□□ -0.45
TRIM6-211ENST00000515022 YBX3P16989 372 aaKnown RBP eCLIP12.23□□□□□ -0.45
TRIM6-211ENST00000515022 ARHGEF25Q86VW2 580 aa12.23□□□□□ -0.45
TRIM6-211ENST00000515022 RAB3GAP2Q9H2M9 1393 aa12.22□□□□□ -0.45
TRIM6-211ENST00000515022 REM2Q8IYK8 340 aaPredicted RBP12.22□□□□□ -0.45
TRIM6-211ENST00000515022 TUBGCP6Q96RT7 1819 aa12.22□□□□□ -0.45
TRIM6-211ENST00000515022 TNS2Q63HR2 1409 aa12.21□□□□□ -0.45
TRIM6-211ENST00000515022 POLD1P28340 1107 aa12.2□□□□□ -0.46
TRIM6-211ENST00000515022 ZNF526Q8TF50 670 aaPredicted RBP12.2□□□□□ -0.46
TRIM6-211ENST00000515022 ATP10DQ9P241 1426 aa12.2□□□□□ -0.46
TRIM6-211ENST00000515022 PNPLA7Q6ZV29 1317 aa12.19□□□□□ -0.46
TRIM6-211ENST00000515022 CENPJQ9HC77 1338 aaPredicted RBP12.19□□□□□ -0.46
TRIM6-211ENST00000515022 NLRP2Q9NX02 1062 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms