RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 DEFB132Q7Z7B7 95 aa20.77■□□□□ 0.92
SGCA-211ENST00000514934 NME9Q86XW9 330 aa20.75■□□□□ 0.91
SGCA-211ENST00000514934 KIF20BQ96Q89 1820 aa20.75■□□□□ 0.91
SGCA-211ENST00000514934 NINLQ9Y2I6 1382 aa20.74■□□□□ 0.91
SGCA-211ENST00000514934 TCP11L2Q8N4U5 519 aa20.74■□□□□ 0.91
SGCA-211ENST00000514934 TIMELESSQ9UNS1 1208 aa20.73■□□□□ 0.91
SGCA-211ENST00000514934 NUP188Q5SRE5 1749 aa20.73■□□□□ 0.91
SGCA-211ENST00000514934 RGPD2P0DJD1 1756 aa20.72■□□□□ 0.91
SGCA-211ENST00000514934 A0A0G2JS52 829 aa20.72■□□□□ 0.91
SGCA-211ENST00000514934 EVA1CP58658 441 aa20.72■□□□□ 0.91
SGCA-211ENST00000514934 MYT1Q01538 1121 aa20.72■□□□□ 0.91
SGCA-211ENST00000514934 KCNH5Q8NCM2 988 aa20.72■□□□□ 0.91
SGCA-211ENST00000514934 USP35Q9P2H5 1018 aa20.72■□□□□ 0.91
SGCA-211ENST00000514934 THRAP3Q9Y2W1 955 aaKnown RBP20.72■□□□□ 0.91
SGCA-211ENST00000514934 WDR17Q8IZU2 1322 aa20.72■□□□□ 0.91
SGCA-211ENST00000514934 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.71■□□□□ 0.91
SGCA-211ENST00000514934 RGPD3A6NKT7 1758 aaPredicted RBP20.71■□□□□ 0.91
SGCA-211ENST00000514934 RGPD4Q7Z3J3 1758 aa20.71■□□□□ 0.91
SGCA-211ENST00000514934 FAM208AQ9UK61 1670 aaKnown RBP20.7■□□□□ 0.91
SGCA-211ENST00000514934 TMC1Q8TDI8 760 aa20.7■□□□□ 0.9
SGCA-211ENST00000514934 PCGF6Q9BYE7 350 aa20.69■□□□□ 0.9
SGCA-211ENST00000514934 ANKRD36BQ8N2N9 1353 aa20.69■□□□□ 0.9
SGCA-211ENST00000514934 HDGFL2Q7Z4V5 671 aaPredicted RBP20.67■□□□□ 0.9
SGCA-211ENST00000514934 TERF2IPQ9NYB0 399 aa20.67■□□□□ 0.9
SGCA-211ENST00000514934 SOX12O15370 315 aa20.66■□□□□ 0.9
SGCA-211ENST00000514934 SHANK3Q9BYB0 1731 aa20.65■□□□□ 0.9
SGCA-211ENST00000514934 LRP5O75197 1615 aa20.65■□□□□ 0.9
SGCA-211ENST00000514934 ZBTB7CA1YPR0 619 aa20.65■□□□□ 0.9
SGCA-211ENST00000514934 ANKRD26Q9UPS8 1709 aa20.64■□□□□ 0.9
SGCA-211ENST00000514934 FAM196AQ6ZSG2 479 aa20.64■□□□□ 0.89
SGCA-211ENST00000514934 BCL9O00512 1426 aa20.63■□□□□ 0.89
SGCA-211ENST00000514934 ERBB3P21860 1342 aa20.63■□□□□ 0.89
SGCA-211ENST00000514934 SLC24A1O60721 1099 aa20.63■□□□□ 0.89
SGCA-211ENST00000514934 CARD10Q9BWT7 1032 aa20.63■□□□□ 0.89
SGCA-211ENST00000514934 EN1Q05925 392 aaPredicted RBP20.62■□□□□ 0.89
SGCA-211ENST00000514934 OVOS2A0A0G2JMS6 1433 aa20.61■□□□□ 0.89
SGCA-211ENST00000514934 TRIM37O94972 964 aa20.61■□□□□ 0.89
SGCA-211ENST00000514934 BAG6P46379 1132 aa20.61■□□□□ 0.89
SGCA-211ENST00000514934 SF3B2Q13435 895 aaKnown RBP20.61■□□□□ 0.89
SGCA-211ENST00000514934 TOM1L2Q6ZVM7 507 aa20.61■□□□□ 0.89
SGCA-211ENST00000514934 CAMKK2Q96RR4 588 aa20.61■□□□□ 0.89
SGCA-211ENST00000514934 NHSQ6T4R5 1651 aa20.61■□□□□ 0.89
SGCA-211ENST00000514934 TMF1P82094 1093 aa20.6■□□□□ 0.89
SGCA-211ENST00000514934 TNS2Q63HR2 1409 aa20.6■□□□□ 0.89
SGCA-211ENST00000514934 CCDC7Q96M83 1385 aa20.59■□□□□ 0.89
SGCA-211ENST00000514934 PDE3BQ13370 1112 aa20.59■□□□□ 0.89
SGCA-211ENST00000514934 MARCH10Q8NA82 808 aaPredicted RBP20.58■□□□□ 0.89
SGCA-211ENST00000514934 MAP2P11137 1827 aaKnown RBP20.57■□□□□ 0.88
SGCA-211ENST00000514934 FYB1O15117 783 aa20.57■□□□□ 0.88
SGCA-211ENST00000514934 FBLN1P23142 703 aa20.57■□□□□ 0.88
SGCA-211ENST00000514934 EZH2Q15910 746 aaKnown RBP20.57■□□□□ 0.88
SGCA-211ENST00000514934 PARD3Q8TEW0 1356 aa20.57■□□□□ 0.88
SGCA-211ENST00000514934 PTF1AQ7RTS3 328 aa20.56■□□□□ 0.88
SGCA-211ENST00000514934 CARD14Q9BXL6 1004 aa20.56■□□□□ 0.88
SGCA-211ENST00000514934 MAP3K19Q56UN5 1328 aa20.55■□□□□ 0.88
SGCA-211ENST00000514934 DDB1Q16531 1140 aa20.55■□□□□ 0.88
SGCA-211ENST00000514934 CDCA7Q9BWT1 371 aaPredicted RBP20.55■□□□□ 0.88
SGCA-211ENST00000514934 BTAF1O14981 1849 aa20.55■□□□□ 0.88
SGCA-211ENST00000514934 IP6K1Q92551 441 aa20.54■□□□□ 0.88
SGCA-211ENST00000514934 KAT6BQ8WYB5 2073 aa20.54■□□□□ 0.88
SGCA-211ENST00000514934 ANKRD24Q8TF21 1146 aa20.53■□□□□ 0.88
SGCA-211ENST00000514934 RTL1A6NKG5 1358 aa20.51■□□□□ 0.87
SGCA-211ENST00000514934 APBA3O96018 575 aa20.51■□□□□ 0.87
SGCA-211ENST00000514934 CSB-PGBD3P0DP91 1061 aa20.51■□□□□ 0.87
SGCA-211ENST00000514934 COG3Q96JB2 828 aa20.51■□□□□ 0.87
SGCA-211ENST00000514934 NSD3Q9BZ95 1437 aa20.51■□□□□ 0.87
SGCA-211ENST00000514934 CASZ1Q86V15 1759 aa20.5■□□□□ 0.87
SGCA-211ENST00000514934 HOXC9P31274 260 aa20.5■□□□□ 0.87
SGCA-211ENST00000514934 GGNBP2Q9H3C7 697 aa20.5■□□□□ 0.87
SGCA-211ENST00000514934 PSDA5PKW4 1024 aaPredicted RBP20.49■□□□□ 0.87
SGCA-211ENST00000514934 C11orf95C9JLR9 678 aaPredicted RBP20.49■□□□□ 0.87
SGCA-211ENST00000514934 CDCA8Q53HL2 280 aa20.49■□□□□ 0.87
SGCA-211ENST00000514934 DOT1LQ8TEK3 1739 aa20.48■□□□□ 0.87
SGCA-211ENST00000514934 CCER1Q8TC90 406 aaPredicted RBP20.48■□□□□ 0.87
SGCA-211ENST00000514934 PAPPAQ13219 1627 aa20.48■□□□□ 0.87
SGCA-211ENST00000514934 NLRP2Q9NX02 1062 aa20.47■□□□□ 0.87
SGCA-211ENST00000514934 MEGF6O75095 1541 aa20.47■□□□□ 0.87
SGCA-211ENST00000514934 HSPA5P11021 654 aaKnown RBP20.46■□□□□ 0.87
SGCA-211ENST00000514934 BCL11BQ9C0K0 894 aaPredicted RBP20.46■□□□□ 0.87
SGCA-211ENST00000514934 PKD1L3Q7Z443 1732 aa20.45■□□□□ 0.86
SGCA-211ENST00000514934 IL2RBP14784 551 aa20.45■□□□□ 0.86
SGCA-211ENST00000514934 RRS1Q15050 365 aaKnown RBP20.45■□□□□ 0.86
SGCA-211ENST00000514934 NCAPD2Q15021 1401 aa20.44■□□□□ 0.86
SGCA-211ENST00000514934 EXOC5O00471 708 aa20.44■□□□□ 0.86
SGCA-211ENST00000514934 PLSCR1O15162 318 aa20.44■□□□□ 0.86
SGCA-211ENST00000514934 PROM2Q8N271 834 aa20.44■□□□□ 0.86
SGCA-211ENST00000514934 R3HDM1Q15032 1099 aaKnown RBP20.43■□□□□ 0.86
SGCA-211ENST00000514934 LY75O60449 1722 aa20.43■□□□□ 0.86
SGCA-211ENST00000514934 KIF24Q5T7B8 1368 aa20.43■□□□□ 0.86
SGCA-211ENST00000514934 INSRP06213 1382 aa20.42■□□□□ 0.86
SGCA-211ENST00000514934 KCNQ2O43526 872 aa20.41■□□□□ 0.86
SGCA-211ENST00000514934 EIF4G2P78344 907 aaKnown RBP eCLIP20.41■□□□□ 0.86
SGCA-211ENST00000514934 TOGARAM1Q9Y4F4 1720 aa20.41■□□□□ 0.86
SGCA-211ENST00000514934 FLT4P35916 1363 aa20.4■□□□□ 0.86
SGCA-211ENST00000514934 LTV1Q96GA3 475 aaPredicted RBP20.4■□□□□ 0.86
SGCA-211ENST00000514934 TUBGCP6Q96RT7 1819 aa20.4■□□□□ 0.86
SGCA-211ENST00000514934 ITGB4P16144 1822 aa20.39■□□□□ 0.86
SGCA-211ENST00000514934 AMPHP49418 695 aa20.39■□□□□ 0.85
SGCA-211ENST00000514934 NBPF6Q5VWK0 638 aa20.39■□□□□ 0.85
SGCA-211ENST00000514934 NBPF4Q96M43 638 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms