RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 TMC1Q8TDI8 760 aa18.89■□□□□ 0.61
PFDN1-206ENST00000514611 WDR17Q8IZU2 1322 aa18.88■□□□□ 0.61
PFDN1-206ENST00000514611 APBA3O96018 575 aa18.87■□□□□ 0.61
PFDN1-206ENST00000514611 NME9Q86XW9 330 aa18.87■□□□□ 0.61
PFDN1-206ENST00000514611 CAMKK2Q96RR4 588 aa18.87■□□□□ 0.61
PFDN1-206ENST00000514611 SLC12A5Q9H2X9 1139 aa18.87■□□□□ 0.61
PFDN1-206ENST00000514611 WNK3Q9BYP7 1800 aa18.86■□□□□ 0.61
PFDN1-206ENST00000514611 LRP5O75197 1615 aa18.86■□□□□ 0.61
PFDN1-206ENST00000514611 A0A1W2PP64 1363 aa18.86■□□□□ 0.61
PFDN1-206ENST00000514611 USP31Q70CQ4 1352 aa18.86■□□□□ 0.61
PFDN1-206ENST00000514611 USP54Q70EL1 1684 aa18.85■□□□□ 0.61
PFDN1-206ENST00000514611 OVOS2A0A0G2JMS6 1433 aa18.85■□□□□ 0.61
PFDN1-206ENST00000514611 OVOS2A0A0J9YW53 1432 aa18.85■□□□□ 0.61
PFDN1-206ENST00000514611 OVOS2Q6IE36 1432 aa18.85■□□□□ 0.61
PFDN1-206ENST00000514611 R3HDM1Q15032 1099 aaKnown RBP18.85■□□□□ 0.61
PFDN1-206ENST00000514611 PEAK1Q9H792 1746 aa18.85■□□□□ 0.61
PFDN1-206ENST00000514611 RGPD5Q99666 1765 aa18.84■□□□□ 0.61
PFDN1-206ENST00000514611 HDGFL2Q7Z4V5 671 aaPredicted RBP18.84■□□□□ 0.61
PFDN1-206ENST00000514611 TESK2Q96S53 571 aa18.84■□□□□ 0.61
PFDN1-206ENST00000514611 ABCC6O95255 1503 aa18.84■□□□□ 0.61
PFDN1-206ENST00000514611 EDC4Q6P2E9 1401 aaKnown RBP18.83■□□□□ 0.61
PFDN1-206ENST00000514611 PARD3Q8TEW0 1356 aa18.83■□□□□ 0.61
PFDN1-206ENST00000514611 RREB1Q92766 1687 aa18.83■□□□□ 0.61
PFDN1-206ENST00000514611 ST20-MTHFSA0A0A6YYL1 179 aa18.83■□□□□ 0.6
PFDN1-206ENST00000514611 CSB-PGBD3P0DP91 1061 aa18.83■□□□□ 0.6
PFDN1-206ENST00000514611 DDB1Q16531 1140 aa18.83■□□□□ 0.6
PFDN1-206ENST00000514611 NUP188Q5SRE5 1749 aa18.81■□□□□ 0.6
PFDN1-206ENST00000514611 CARD10Q9BWT7 1032 aa18.8■□□□□ 0.6
PFDN1-206ENST00000514611 TERF2IPQ9NYB0 399 aa18.8■□□□□ 0.6
PFDN1-206ENST00000514611 ERBB3P21860 1342 aa18.78■□□□□ 0.6
PFDN1-206ENST00000514611 MARCH10Q8NA82 808 aaPredicted RBP18.78■□□□□ 0.6
PFDN1-206ENST00000514611 PUS7Q96PZ0 661 aaKnown RBP18.78■□□□□ 0.6
PFDN1-206ENST00000514611 CCDC7Q96M83 1385 aa18.78■□□□□ 0.6
PFDN1-206ENST00000514611 LTN1O94822 1766 aa18.78■□□□□ 0.6
PFDN1-206ENST00000514611 PTF1AQ7RTS3 328 aa18.77■□□□□ 0.6
PFDN1-206ENST00000514611 CDCA7Q9BWT1 371 aaPredicted RBP18.77■□□□□ 0.6
PFDN1-206ENST00000514611 USP47Q96K76 1375 aa18.77■□□□□ 0.6
PFDN1-206ENST00000514611 NINLQ9Y2I6 1382 aa18.77■□□□□ 0.6
PFDN1-206ENST00000514611 TNS2Q63HR2 1409 aa18.76■□□□□ 0.59
PFDN1-206ENST00000514611 C11orf95C9JLR9 678 aaPredicted RBP18.75■□□□□ 0.59
PFDN1-206ENST00000514611 SBF2Q86WG5 1849 aa18.74■□□□□ 0.59
PFDN1-206ENST00000514611 BCL9O00512 1426 aa18.74■□□□□ 0.59
PFDN1-206ENST00000514611 ANKRD24Q8TF21 1146 aa18.73■□□□□ 0.59
PFDN1-206ENST00000514611 NLRP2Q9NX02 1062 aa18.73■□□□□ 0.59
PFDN1-206ENST00000514611 ANKRD36BQ8N2N9 1353 aa18.72■□□□□ 0.59
PFDN1-206ENST00000514611 BCL11BQ9C0K0 894 aaPredicted RBP18.72■□□□□ 0.59
PFDN1-206ENST00000514611 RGPD3A6NKT7 1758 aaPredicted RBP18.72■□□□□ 0.59
PFDN1-206ENST00000514611 RGPD4Q7Z3J3 1758 aa18.72■□□□□ 0.59
PFDN1-206ENST00000514611 EXOC5O00471 708 aa18.71■□□□□ 0.59
PFDN1-206ENST00000514611 PLSCR1O15162 318 aa18.69■□□□□ 0.58
PFDN1-206ENST00000514611 FBLN1P23142 703 aa18.69■□□□□ 0.58
PFDN1-206ENST00000514611 TMF1P82094 1093 aa18.69■□□□□ 0.58
PFDN1-206ENST00000514611 NBPF14Q5TI25 921 aa18.69■□□□□ 0.58
PFDN1-206ENST00000514611 COG3Q96JB2 828 aa18.69■□□□□ 0.58
PFDN1-206ENST00000514611 SLC24A1O60721 1099 aa18.68■□□□□ 0.58
PFDN1-206ENST00000514611 IL2RBP14784 551 aa18.68■□□□□ 0.58
PFDN1-206ENST00000514611 ANO8Q9HCE9 1232 aaPredicted RBP18.68■□□□□ 0.58
PFDN1-206ENST00000514611 IP6K1Q92551 441 aa18.67■□□□□ 0.58
PFDN1-206ENST00000514611 LTV1Q96GA3 475 aaPredicted RBP18.67■□□□□ 0.58
PFDN1-206ENST00000514611 MAP3K19Q56UN5 1328 aa18.67■□□□□ 0.58
PFDN1-206ENST00000514611 KCNQ2O43526 872 aa18.66■□□□□ 0.58
PFDN1-206ENST00000514611 NHSQ6T4R5 1651 aa18.66■□□□□ 0.58
PFDN1-206ENST00000514611 PROM2Q8N271 834 aa18.65■□□□□ 0.58
PFDN1-206ENST00000514611 ACSBG1Q96GR2 724 aa18.65■□□□□ 0.58
PFDN1-206ENST00000514611 PCGF6Q9BYE7 350 aa18.65■□□□□ 0.58
PFDN1-206ENST00000514611 HOXC9P31274 260 aa18.64■□□□□ 0.57
PFDN1-206ENST00000514611 GGNBP2Q9H3C7 697 aa18.64■□□□□ 0.57
PFDN1-206ENST00000514611 FAM208AQ9UK61 1670 aaKnown RBP18.63■□□□□ 0.57
PFDN1-206ENST00000514611 MYOM1P52179 1685 aa18.63■□□□□ 0.57
PFDN1-206ENST00000514611 FYB1O15117 783 aa18.62■□□□□ 0.57
PFDN1-206ENST00000514611 AMPHP49418 695 aa18.62■□□□□ 0.57
PFDN1-206ENST00000514611 RRS1Q15050 365 aaKnown RBP18.62■□□□□ 0.57
PFDN1-206ENST00000514611 TXNRD1Q16881 649 aa18.61■□□□□ 0.57
PFDN1-206ENST00000514611 RTL1A6NKG5 1358 aa18.6■□□□□ 0.57
PFDN1-206ENST00000514611 CLSPNQ9HAW4 1339 aa18.6■□□□□ 0.57
PFDN1-206ENST00000514611 PDGFDQ9GZP0 370 aaPredicted RBP18.6■□□□□ 0.57
PFDN1-206ENST00000514611 CASZ1Q86V15 1759 aa18.6■□□□□ 0.57
PFDN1-206ENST00000514611 MEGF6O75095 1541 aa18.59■□□□□ 0.57
PFDN1-206ENST00000514611 KIF20BQ96Q89 1820 aa18.59■□□□□ 0.57
PFDN1-206ENST00000514611 CDCA8Q53HL2 280 aa18.59■□□□□ 0.57
PFDN1-206ENST00000514611 NSD3Q9BZ95 1437 aa18.58■□□□□ 0.57
PFDN1-206ENST00000514611 TIMELESSQ9UNS1 1208 aa18.58■□□□□ 0.56
PFDN1-206ENST00000514611 DDX54Q8TDD1 881 aaKnown RBP18.57■□□□□ 0.56
PFDN1-206ENST00000514611 SPON1Q9HCB6 807 aa18.57■□□□□ 0.56
PFDN1-206ENST00000514611 RGPD2P0DJD1 1756 aa18.57■□□□□ 0.56
PFDN1-206ENST00000514611 BTAF1O14981 1849 aa18.56■□□□□ 0.56
PFDN1-206ENST00000514611 CARD14Q9BXL6 1004 aa18.56■□□□□ 0.56
PFDN1-206ENST00000514611 PAPPAQ13219 1627 aa18.56■□□□□ 0.56
PFDN1-206ENST00000514611 SHANK3Q9BYB0 1731 aa18.55■□□□□ 0.56
PFDN1-206ENST00000514611 USHBP1Q8N6Y0 703 aa18.55■□□□□ 0.56
PFDN1-206ENST00000514611 STK32BQ9NY57 414 aa18.55■□□□□ 0.56
PFDN1-206ENST00000514611 ZBTB7AO95365 584 aa18.54■□□□□ 0.56
PFDN1-206ENST00000514611 SLC15A2Q16348 729 aa18.54■□□□□ 0.56
PFDN1-206ENST00000514611 NBPF6Q5VWK0 638 aa18.54■□□□□ 0.56
PFDN1-206ENST00000514611 NBPF4Q96M43 638 aa18.54■□□□□ 0.56
PFDN1-206ENST00000514611 PPP1R1BQ9UD71 204 aaPredicted RBP18.54■□□□□ 0.56
PFDN1-206ENST00000514611 SMG6Q86US8 1419 aaKnown RBP18.54■□□□□ 0.56
PFDN1-206ENST00000514611 FLT4P35916 1363 aa18.53■□□□□ 0.56
PFDN1-206ENST00000514611 DOT1LQ8TEK3 1739 aa18.52■□□□□ 0.56
PFDN1-206ENST00000514611 HSP90AB2PQ58FF8 381 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms