RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 MARCH10Q8NA82 808 aaPredicted RBP18.01■□□□□ 0.47
SFXN1-210ENST00000513725 LMO7Q8WWI1 1683 aa18.01■□□□□ 0.47
SFXN1-210ENST00000513725 ANKRD30BQ9BXX2 1392 aa18.01■□□□□ 0.47
SFXN1-210ENST00000513725 POGKQ9P215 609 aa18■□□□□ 0.47
SFXN1-210ENST00000513725 CPDO75976 1380 aa18■□□□□ 0.47
SFXN1-210ENST00000513725 NUTM2GQ5VZR2 741 aa17.99■□□□□ 0.47
SFXN1-210ENST00000513725 COL5A2P05997 1499 aaPredicted RBP17.99■□□□□ 0.47
SFXN1-210ENST00000513725 TOMM70O94826 608 aa17.98■□□□□ 0.47
SFXN1-210ENST00000513725 PAPPAQ13219 1627 aa17.98■□□□□ 0.47
SFXN1-210ENST00000513725 PIK3C2GO75747 1445 aa17.98■□□□□ 0.47
SFXN1-210ENST00000513725 AKAP12Q02952 1782 aa17.97■□□□□ 0.47
SFXN1-210ENST00000513725 ZNF827Q17R98 1081 aa17.97■□□□□ 0.47
SFXN1-210ENST00000513725 COL24A1Q17RW2 1714 aa17.97■□□□□ 0.47
SFXN1-210ENST00000513725 PRR36Q9H6K5 1346 aa17.97■□□□□ 0.47
SFXN1-210ENST00000513725 WDR90Q96KV7 1748 aa17.96■□□□□ 0.47
SFXN1-210ENST00000513725 TULP4Q9NRJ4 1543 aa17.95■□□□□ 0.46
SFXN1-210ENST00000513725 RGL3Q3MIN7 710 aa17.95■□□□□ 0.46
SFXN1-210ENST00000513725 CDCA7Q9BWT1 371 aaPredicted RBP17.95■□□□□ 0.46
SFXN1-210ENST00000513725 PCNTO95613 3336 aa17.95■□□□□ 0.46
SFXN1-210ENST00000513725 ITGAEP38570 1179 aa17.94■□□□□ 0.46
SFXN1-210ENST00000513725 HIRIP3Q9BW71 556 aaPredicted RBP17.93■□□□□ 0.46
SFXN1-210ENST00000513725 TOM1L2Q6ZVM7 507 aa17.92■□□□□ 0.46
SFXN1-210ENST00000513725 C14orf93Q9H972 538 aaKnown RBP17.91■□□□□ 0.46
SFXN1-210ENST00000513725 QSER1Q2KHR3 1735 aa17.9■□□□□ 0.46
SFXN1-210ENST00000513725 WASLO00401 505 aaPredicted RBP17.89■□□□□ 0.45
SFXN1-210ENST00000513725 ABTB2Q8N961 1025 aa17.89■□□□□ 0.45
SFXN1-210ENST00000513725 AKT1S1Q96B36 256 aa17.89■□□□□ 0.45
SFXN1-210ENST00000513725 PNPLA7Q6ZV29 1317 aa17.89■□□□□ 0.45
SFXN1-210ENST00000513725 EXOC5O00471 708 aa17.88■□□□□ 0.45
SFXN1-210ENST00000513725 HTRA3P83110 453 aa17.88■□□□□ 0.45
SFXN1-210ENST00000513725 ARHGEF28Q8N1W1 1705 aaKnown RBP17.88■□□□□ 0.45
SFXN1-210ENST00000513725 WNK3Q9BYP7 1800 aa17.87■□□□□ 0.45
SFXN1-210ENST00000513725 GCP02774 474 aa17.87■□□□□ 0.45
SFXN1-210ENST00000513725 TFCP2L1Q9NZI6 479 aa17.87■□□□□ 0.45
SFXN1-210ENST00000513725 MINK1Q8N4C8 1332 aaPredicted RBP17.87■□□□□ 0.45
SFXN1-210ENST00000513725 BRD4O60885 1362 aaPredicted RBP17.87■□□□□ 0.45
SFXN1-210ENST00000513725 NHSQ6T4R5 1651 aa17.87■□□□□ 0.45
SFXN1-210ENST00000513725 ZBTB7CA1YPR0 619 aa17.86■□□□□ 0.45
SFXN1-210ENST00000513725 LRRC4BQ9NT99 713 aa17.86■□□□□ 0.45
SFXN1-210ENST00000513725 USP19O94966 1318 aa17.86■□□□□ 0.45
SFXN1-210ENST00000513725 ITSN1Q15811 1721 aa17.85■□□□□ 0.45
SFXN1-210ENST00000513725 CFAP70Q5T0N1 1121 aa17.85■□□□□ 0.45
SFXN1-210ENST00000513725 CD2APQ9Y5K6 639 aa17.85■□□□□ 0.45
SFXN1-210ENST00000513725 SPATA31E1Q6ZUB1 1445 aa17.84■□□□□ 0.45
SFXN1-210ENST00000513725 NLRP13Q86W25 1043 aa17.84■□□□□ 0.45
SFXN1-210ENST00000513725 RBM46Q8TBY0 533 aaKnown RBP17.84■□□□□ 0.45
SFXN1-210ENST00000513725 ACSBG1Q96GR2 724 aa17.84■□□□□ 0.45
SFXN1-210ENST00000513725 HSPA1AP0DMV8 641 aaKnown RBP17.83■□□□□ 0.44
SFXN1-210ENST00000513725 HSPA1BP0DMV9 641 aaKnown RBP17.83■□□□□ 0.44
SFXN1-210ENST00000513725 SLC4A1APQ9BWU0 796 aaKnown RBP17.83■□□□□ 0.44
SFXN1-210ENST00000513725 WDR17Q8IZU2 1322 aa17.82■□□□□ 0.44
SFXN1-210ENST00000513725 SLC27A3Q5K4L6 730 aa17.82■□□□□ 0.44
SFXN1-210ENST00000513725 C16orf71Q8IYS4 520 aaPredicted RBP17.81■□□□□ 0.44
SFXN1-210ENST00000513725 NUDT16Q96DE0 195 aaKnown RBP17.81■□□□□ 0.44
SFXN1-210ENST00000513725 USP6P35125 1406 aa17.81■□□□□ 0.44
SFXN1-210ENST00000513725 FSTL1Q12841 308 aa17.8■□□□□ 0.44
SFXN1-210ENST00000513725 MSH5O43196 834 aa17.79■□□□□ 0.44
SFXN1-210ENST00000513725 BTAF1O14981 1849 aa17.79■□□□□ 0.44
SFXN1-210ENST00000513725 ACEP12821 1306 aa17.78■□□□□ 0.44
SFXN1-210ENST00000513725 CARD10Q9BWT7 1032 aa17.78■□□□□ 0.44
SFXN1-210ENST00000513725 TRAK1Q9UPV9 953 aa17.78■□□□□ 0.44
SFXN1-210ENST00000513725 POLR3AO14802 1390 aaPredicted RBP17.78■□□□□ 0.44
SFXN1-210ENST00000513725 TNS2Q63HR2 1409 aa17.77■□□□□ 0.44
SFXN1-210ENST00000513725 LOC105371045A0A1W2PR82 267 aa17.76■□□□□ 0.43
SFXN1-210ENST00000513725 NMRK2Q9NPI5 230 aa17.76■□□□□ 0.43
SFXN1-210ENST00000513725 TUBGCP6Q96RT7 1819 aa17.76■□□□□ 0.43
SFXN1-210ENST00000513725 CSB-PGBD3P0DP91 1061 aa17.74■□□□□ 0.43
SFXN1-210ENST00000513725 IGSF1Q8N6C5 1336 aa17.73■□□□□ 0.43
SFXN1-210ENST00000513725 FAM161AQ3B820 660 aa17.73■□□□□ 0.43
SFXN1-210ENST00000513725 MSL1Q68DK7 614 aa17.73■□□□□ 0.43
SFXN1-210ENST00000513725 TRPM1Q7Z4N2 1603 aa17.72■□□□□ 0.43
SFXN1-210ENST00000513725 AXIN2Q9Y2T1 843 aa17.72■□□□□ 0.43
SFXN1-210ENST00000513725 CCDC7Q96M83 1385 aa17.71■□□□□ 0.43
SFXN1-210ENST00000513725 COL23A1Q86Y22 540 aaPredicted RBP17.71■□□□□ 0.43
SFXN1-210ENST00000513725 CCDC61Q9Y6R9 512 aa17.71■□□□□ 0.43
SFXN1-210ENST00000513725 KAT6BQ8WYB5 2073 aa17.71■□□□□ 0.43
SFXN1-210ENST00000513725 PLEKHG3A1L390 1219 aa17.7■□□□□ 0.42
SFXN1-210ENST00000513725 ABCC6O95255 1503 aa17.7■□□□□ 0.42
SFXN1-210ENST00000513725 COL18A1P39060 1754 aa17.69■□□□□ 0.42
SFXN1-210ENST00000513725 CICQ96RK0 1608 aaPredicted RBP17.68■□□□□ 0.42
SFXN1-210ENST00000513725 PPIP5K1Q6PFW1 1433 aa17.67■□□□□ 0.42
SFXN1-210ENST00000513725 KCNQ4P56696 695 aa17.67■□□□□ 0.42
SFXN1-210ENST00000513725 NLRP6P59044 892 aa17.67■□□□□ 0.42
SFXN1-210ENST00000513725 ADGRB1O14514 1584 aa17.66■□□□□ 0.42
SFXN1-210ENST00000513725 CDK19Q9BWU1 502 aa17.66■□□□□ 0.42
SFXN1-210ENST00000513725 SLIT3O75094 1523 aa17.65■□□□□ 0.42
SFXN1-210ENST00000513725 PIK3C2AO00443 1686 aa17.64■□□□□ 0.42
SFXN1-210ENST00000513725 CPSF1Q10570 1443 aaKnown RBP17.64■□□□□ 0.41
SFXN1-210ENST00000513725 SMC1BQ8NDV3 1235 aa17.63■□□□□ 0.41
SFXN1-210ENST00000513725 MLLT1Q03111 559 aaPredicted RBP17.61■□□□□ 0.41
SFXN1-210ENST00000513725 FLAD1Q8NFF5 587 aa17.61■□□□□ 0.41
SFXN1-210ENST00000513725 PRDM10Q9NQV6 1147 aa17.61■□□□□ 0.41
SFXN1-210ENST00000513725 CCNL1Q9UK58 526 aaPredicted RBP17.61■□□□□ 0.41
SFXN1-210ENST00000513725 KDM2BQ8NHM5 1336 aa17.61■□□□□ 0.41
SFXN1-210ENST00000513725 RGPD5Q99666 1765 aa17.61■□□□□ 0.41
SFXN1-210ENST00000513725 IL2RBP14784 551 aa17.6■□□□□ 0.41
SFXN1-210ENST00000513725 ARHGEF25Q86VW2 580 aa17.6■□□□□ 0.41
SFXN1-210ENST00000513725 C10orf71Q711Q0 1435 aa17.59■□□□□ 0.41
SFXN1-210ENST00000513725 PLEKHG2Q9H7P9 1386 aa17.59■□□□□ 0.41
SFXN1-210ENST00000513725 ARHGAP27Q6ZUM4 889 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms