RNA–Protein interactions for RNA: ENST00000513595.1

FOXD1-201, Transcript of forkhead box D1, humanhuman

TSL 3

Gene FOXD1, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD1-201ENST00000513595 FXR2P51116 673 aaKnown RBP eCLIP18.68■□□□□ 0.58
FOXD1-201ENST00000513595 TRPM1Q7Z4N2 1603 aa18.67■□□□□ 0.58
FOXD1-201ENST00000513595 CHRNA2Q15822 529 aa18.67■□□□□ 0.58
FOXD1-201ENST00000513595 KIAA0232Q92628 1395 aa18.67■□□□□ 0.58
FOXD1-201ENST00000513595 TRPM3Q9HCF6 1732 aaPredicted RBP18.66■□□□□ 0.58
FOXD1-201ENST00000513595 EIF4G2P78344 907 aaKnown RBP eCLIP18.65■□□□□ 0.58
FOXD1-201ENST00000513595 ALS2Q96Q42 1657 aa18.65■□□□□ 0.58
FOXD1-201ENST00000513595 KIAA1210Q9ULL0 1709 aa18.65■□□□□ 0.58
FOXD1-201ENST00000513595 ROCK2O75116 1388 aaKnown RBP18.65■□□□□ 0.58
FOXD1-201ENST00000513595 EVA1CP58658 441 aa18.64■□□□□ 0.57
FOXD1-201ENST00000513595 TCP11L2Q8N4U5 519 aa18.64■□□□□ 0.57
FOXD1-201ENST00000513595 ARXQ96QS3 562 aa18.64■□□□□ 0.57
FOXD1-201ENST00000513595 MTFR1LQ9H019 292 aa18.64■□□□□ 0.57
FOXD1-201ENST00000513595 KLHL34Q8N239 644 aa18.63■□□□□ 0.57
FOXD1-201ENST00000513595 PRAM1Q96QH2 718 aa18.63■□□□□ 0.57
FOXD1-201ENST00000513595 STK32BQ9NY57 414 aa18.63■□□□□ 0.57
FOXD1-201ENST00000513595 PIK3C2GO75747 1445 aa18.63■□□□□ 0.57
FOXD1-201ENST00000513595 PAK3O75914 559 aaPredicted RBP18.62■□□□□ 0.57
FOXD1-201ENST00000513595 SAFB2Q14151 953 aaKnown RBP eCLIP18.62■□□□□ 0.57
FOXD1-201ENST00000513595 SSH2Q76I76 1423 aa18.62■□□□□ 0.57
FOXD1-201ENST00000513595 LARP1Q6PKG0 1096 aaKnown RBP18.61■□□□□ 0.57
FOXD1-201ENST00000513595 CARD11Q9BXL7 1154 aa18.61■□□□□ 0.57
FOXD1-201ENST00000513595 C14orf93Q9H972 538 aaKnown RBP18.61■□□□□ 0.57
FOXD1-201ENST00000513595 SSUH2Q9Y2M2 353 aa18.61■□□□□ 0.57
FOXD1-201ENST00000513595 THRAP3Q9Y2W1 955 aaKnown RBP18.61■□□□□ 0.57
FOXD1-201ENST00000513595 ZC3H6P61129 1189 aaKnown RBP18.6■□□□□ 0.57
FOXD1-201ENST00000513595 PROM2Q8N271 834 aa18.6■□□□□ 0.57
FOXD1-201ENST00000513595 SGIP1Q9BQI5 828 aa18.6■□□□□ 0.57
FOXD1-201ENST00000513595 HSPA5P11021 654 aaKnown RBP18.59■□□□□ 0.57
FOXD1-201ENST00000513595 RGPD3A6NKT7 1758 aaPredicted RBP18.59■□□□□ 0.57
FOXD1-201ENST00000513595 RGPD4Q7Z3J3 1758 aa18.59■□□□□ 0.57
FOXD1-201ENST00000513595 CRYBG1Q9Y4K1 1723 aa18.59■□□□□ 0.57
FOXD1-201ENST00000513595 ATP10DQ9P241 1426 aa18.58■□□□□ 0.57
FOXD1-201ENST00000513595 USP47Q96K76 1375 aa18.58■□□□□ 0.57
FOXD1-201ENST00000513595 MAP3K5Q99683 1374 aa18.58■□□□□ 0.57
FOXD1-201ENST00000513595 NGDNQ8NEJ9 315 aaKnown RBP18.58■□□□□ 0.56
FOXD1-201ENST00000513595 GPBP1L1Q9HC44 474 aaPredicted RBP18.58■□□□□ 0.56
FOXD1-201ENST00000513595 POGKQ9P215 609 aa18.57■□□□□ 0.56
FOXD1-201ENST00000513595 PRR36Q9H6K5 1346 aa18.56■□□□□ 0.56
FOXD1-201ENST00000513595 SLC34A2O95436 690 aa18.56■□□□□ 0.56
FOXD1-201ENST00000513595 SLC15A2Q16348 729 aa18.56■□□□□ 0.56
FOXD1-201ENST00000513595 NBPF1Q3BBV0 1214 aa18.56■□□□□ 0.56
FOXD1-201ENST00000513595 COL13A1Q5TAT6 717 aaPredicted RBP18.56■□□□□ 0.56
FOXD1-201ENST00000513595 OVOS2A0A0G2JMS6 1433 aa18.56■□□□□ 0.56
FOXD1-201ENST00000513595 OVOS2A0A0J9YW53 1432 aa18.56■□□□□ 0.56
FOXD1-201ENST00000513595 OVOS2Q6IE36 1432 aa18.56■□□□□ 0.56
FOXD1-201ENST00000513595 EIF3AQ14152 1382 aaKnown RBP18.55■□□□□ 0.56
FOXD1-201ENST00000513595 PRELPP51888 382 aa18.54■□□□□ 0.56
FOXD1-201ENST00000513595 PTF1AQ7RTS3 328 aa18.54■□□□□ 0.56
FOXD1-201ENST00000513595 ZNF526Q8TF50 670 aaPredicted RBP18.54■□□□□ 0.56
FOXD1-201ENST00000513595 CFAP70Q5T0N1 1121 aa18.53■□□□□ 0.56
FOXD1-201ENST00000513595 TNS4Q8IZW8 715 aa18.53■□□□□ 0.56
FOXD1-201ENST00000513595 ZNF692Q9BU19 519 aaPredicted RBP18.52■□□□□ 0.56
FOXD1-201ENST00000513595 HIRIP3Q9BW71 556 aaPredicted RBP18.51■□□□□ 0.55
FOXD1-201ENST00000513595 PEAK1Q9H792 1746 aa18.5■□□□□ 0.55
FOXD1-201ENST00000513595 TXNRD1Q16881 649 aa18.5■□□□□ 0.55
FOXD1-201ENST00000513595 WASLO00401 505 aaPredicted RBP18.49■□□□□ 0.55
FOXD1-201ENST00000513595 NUTM2GQ5VZR2 741 aa18.49■□□□□ 0.55
FOXD1-201ENST00000513595 CPDO75976 1380 aa18.49■□□□□ 0.55
FOXD1-201ENST00000513595 ADGRB1O14514 1584 aa18.49■□□□□ 0.55
FOXD1-201ENST00000513595 PARP4Q9UKK3 1724 aaKnown RBP18.49■□□□□ 0.55
FOXD1-201ENST00000513595 TULP4Q9NRJ4 1543 aa18.49■□□□□ 0.55
FOXD1-201ENST00000513595 ATP7BP35670 1465 aa18.47■□□□□ 0.55
FOXD1-201ENST00000513595 GRIN3BO60391 1043 aa18.47■□□□□ 0.55
FOXD1-201ENST00000513595 APLP1P51693 650 aa18.47■□□□□ 0.55
FOXD1-201ENST00000513595 DDB1Q16531 1140 aa18.47■□□□□ 0.55
FOXD1-201ENST00000513595 BCL9O00512 1426 aa18.47■□□□□ 0.55
FOXD1-201ENST00000513595 MINK1Q8N4C8 1332 aaPredicted RBP18.47■□□□□ 0.55
FOXD1-201ENST00000513595 PHRF1Q9P1Y6 1649 aaKnown RBP18.46■□□□□ 0.55
FOXD1-201ENST00000513595 SP7Q8TDD2 431 aaPredicted RBP18.46■□□□□ 0.55
FOXD1-201ENST00000513595 ST20-MTHFSA0A0A6YYL1 179 aa18.45■□□□□ 0.54
FOXD1-201ENST00000513595 NLGN2Q8NFZ4 835 aa18.45■□□□□ 0.54
FOXD1-201ENST00000513595 CRB1P82279 1406 aa18.44■□□□□ 0.54
FOXD1-201ENST00000513595 SLC24A1O60721 1099 aa18.44■□□□□ 0.54
FOXD1-201ENST00000513595 YBX3P16989 372 aaKnown RBP eCLIP18.44■□□□□ 0.54
FOXD1-201ENST00000513595 SBF2Q86WG5 1849 aa18.44■□□□□ 0.54
FOXD1-201ENST00000513595 LMO7Q8WWI1 1683 aa18.44■□□□□ 0.54
FOXD1-201ENST00000513595 MARCH10Q8NA82 808 aaPredicted RBP18.43■□□□□ 0.54
FOXD1-201ENST00000513595 AATKQ6ZMQ8 1374 aa18.42■□□□□ 0.54
FOXD1-201ENST00000513595 COL5A2P05997 1499 aaPredicted RBP18.42■□□□□ 0.54
FOXD1-201ENST00000513595 POLD1P28340 1107 aa18.42■□□□□ 0.54
FOXD1-201ENST00000513595 DNAJC5GQ8N7S2 189 aa18.42■□□□□ 0.54
FOXD1-201ENST00000513595 TRAK1Q9UPV9 953 aa18.42■□□□□ 0.54
FOXD1-201ENST00000513595 DIEXFQ68CQ4 756 aaKnown RBP18.41■□□□□ 0.54
FOXD1-201ENST00000513595 SPDYE1Q8NFV5 336 aaPredicted RBP18.41■□□□□ 0.54
FOXD1-201ENST00000513595 NUDT16Q96DE0 195 aaKnown RBP18.41■□□□□ 0.54
FOXD1-201ENST00000513595 USP19O94966 1318 aa18.41■□□□□ 0.54
FOXD1-201ENST00000513595 CCDC7Q96M83 1385 aa18.41■□□□□ 0.54
FOXD1-201ENST00000513595 GCP02774 474 aa18.4■□□□□ 0.54
FOXD1-201ENST00000513595 ABTB2Q8N961 1025 aa18.4■□□□□ 0.54
FOXD1-201ENST00000513595 SBNO2Q9Y2G9 1366 aa18.39■□□□□ 0.53
FOXD1-201ENST00000513595 TESK2Q96S53 571 aa18.38■□□□□ 0.53
FOXD1-201ENST00000513595 CDCA7Q9BWT1 371 aaPredicted RBP18.38■□□□□ 0.53
FOXD1-201ENST00000513595 WASHC2AQ641Q2 1341 aa18.38■□□□□ 0.53
FOXD1-201ENST00000513595 TMF1P82094 1093 aa18.37■□□□□ 0.53
FOXD1-201ENST00000513595 POLR3AO14802 1390 aaPredicted RBP18.37■□□□□ 0.53
FOXD1-201ENST00000513595 LRRC37A3O60309 1634 aa18.37■□□□□ 0.53
FOXD1-201ENST00000513595 KIF7Q2M1P5 1343 aa18.36■□□□□ 0.53
FOXD1-201ENST00000513595 NLRP13Q86W25 1043 aa18.36■□□□□ 0.53
FOXD1-201ENST00000513595 CENPJQ9HC77 1338 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms