RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 SYT17Q9BSW7 474 aa16.02■□□□□ 0.16
DDX41-216ENST00000513562 FHDC1Q9C0D6 1143 aaPredicted RBP16.02■□□□□ 0.16
DDX41-216ENST00000513562 ATF5Q9Y2D1 282 aaPredicted RBP16.02■□□□□ 0.16
DDX41-216ENST00000513562 WDR17Q8IZU2 1322 aa16.01■□□□□ 0.15
DDX41-216ENST00000513562 ZBTB7CA1YPR0 619 aa16.01■□□□□ 0.15
DDX41-216ENST00000513562 SLC15A2Q16348 729 aa16.01■□□□□ 0.15
DDX41-216ENST00000513562 TXNRD1Q16881 649 aa16.01■□□□□ 0.15
DDX41-216ENST00000513562 SGIP1Q9BQI5 828 aa16.01■□□□□ 0.15
DDX41-216ENST00000513562 CDCA7Q9BWT1 371 aaPredicted RBP16.01■□□□□ 0.15
DDX41-216ENST00000513562 STK32BQ9NY57 414 aa16.01■□□□□ 0.15
DDX41-216ENST00000513562 USP6P35125 1406 aa16.01■□□□□ 0.15
DDX41-216ENST00000513562 SENP3-EIF4A1A0A087X0R7 540 aa16■□□□□ 0.15
DDX41-216ENST00000513562 SRPK2P78362 688 aaKnown RBP16■□□□□ 0.15
DDX41-216ENST00000513562 MTFR1LQ9H019 292 aa16■□□□□ 0.15
DDX41-216ENST00000513562 SBF2Q86WG5 1849 aa16■□□□□ 0.15
DDX41-216ENST00000513562 NLRP6P59044 892 aa15.99■□□□□ 0.15
DDX41-216ENST00000513562 AXIN2Q9Y2T1 843 aa15.99■□□□□ 0.15
DDX41-216ENST00000513562 C1QTNF8P60827 252 aa15.98■□□□□ 0.15
DDX41-216ENST00000513562 CPSF1Q10570 1443 aaKnown RBP15.98■□□□□ 0.15
DDX41-216ENST00000513562 CABP2Q9NPB3 220 aa15.98■□□□□ 0.15
DDX41-216ENST00000513562 MAP3K5Q99683 1374 aa15.97■□□□□ 0.15
DDX41-216ENST00000513562 COL18A1P39060 1754 aa15.96■□□□□ 0.15
DDX41-216ENST00000513562 CARD10Q9BWT7 1032 aa15.96■□□□□ 0.15
DDX41-216ENST00000513562 WNK3Q9BYP7 1800 aa15.96■□□□□ 0.14
DDX41-216ENST00000513562 CENPJQ9HC77 1338 aaPredicted RBP15.95■□□□□ 0.14
DDX41-216ENST00000513562 KIAA1210Q9ULL0 1709 aa15.95■□□□□ 0.14
DDX41-216ENST00000513562 NBPF1Q3BBV0 1214 aa15.95■□□□□ 0.14
DDX41-216ENST00000513562 ARHGEF25Q86VW2 580 aa15.95■□□□□ 0.14
DDX41-216ENST00000513562 CABP1Q9NZU7 370 aa15.95■□□□□ 0.14
DDX41-216ENST00000513562 TNS2Q63HR2 1409 aa15.94■□□□□ 0.14
DDX41-216ENST00000513562 ARXQ96QS3 562 aa15.94■□□□□ 0.14
DDX41-216ENST00000513562 PIK3C2AO00443 1686 aa15.94■□□□□ 0.14
DDX41-216ENST00000513562 CCDC7Q96M83 1385 aa15.92■□□□□ 0.14
DDX41-216ENST00000513562 EXOC5O00471 708 aa15.92■□□□□ 0.14
DDX41-216ENST00000513562 CSB-PGBD3P0DP91 1061 aa15.92■□□□□ 0.14
DDX41-216ENST00000513562 PAPPAQ13219 1627 aa15.92■□□□□ 0.14
DDX41-216ENST00000513562 TRPM1Q7Z4N2 1603 aa15.91■□□□□ 0.14
DDX41-216ENST00000513562 AKAP12Q02952 1782 aa15.91■□□□□ 0.14
DDX41-216ENST00000513562 KCNH5Q8NCM2 988 aa15.91■□□□□ 0.14
DDX41-216ENST00000513562 NHSQ6T4R5 1651 aa15.89■□□□□ 0.13
DDX41-216ENST00000513562 QRICH2Q9H0J4 1663 aa15.89■□□□□ 0.13
DDX41-216ENST00000513562 ABCC6O95255 1503 aa15.89■□□□□ 0.13
DDX41-216ENST00000513562 GOLGB1Q14789 3259 aaKnown RBP15.89■□□□□ 0.13
DDX41-216ENST00000513562 IFFO2Q5TF58 517 aa15.89■□□□□ 0.13
DDX41-216ENST00000513562 TTC21BQ7Z4L5 1316 aa15.89■□□□□ 0.13
DDX41-216ENST00000513562 NFAT5O94916 1531 aa15.89■□□□□ 0.13
DDX41-216ENST00000513562 ZNF827Q17R98 1081 aa15.88■□□□□ 0.13
DDX41-216ENST00000513562 ACSBG1Q96GR2 724 aa15.87■□□□□ 0.13
DDX41-216ENST00000513562 CEP350Q5VT06 3117 aa15.86■□□□□ 0.13
DDX41-216ENST00000513562 SOX12O15370 315 aa15.86■□□□□ 0.13
DDX41-216ENST00000513562 GIGYF1O75420 1035 aaPredicted RBP15.86■□□□□ 0.13
DDX41-216ENST00000513562 GPR162Q16538 588 aa15.86■□□□□ 0.13
DDX41-216ENST00000513562 ZNF692Q9BU19 519 aaPredicted RBP15.86■□□□□ 0.13
DDX41-216ENST00000513562 TTC21AQ8NDW8 1320 aa15.86■□□□□ 0.13
DDX41-216ENST00000513562 EVC2Q86UK5 1308 aa15.85■□□□□ 0.13
DDX41-216ENST00000513562 LRRC4BQ9NT99 713 aa15.84■□□□□ 0.13
DDX41-216ENST00000513562 ERBB3P21860 1342 aa15.84■□□□□ 0.13
DDX41-216ENST00000513562 SLC16A10Q8TF71 515 aa15.83■□□□□ 0.12
DDX41-216ENST00000513562 AKT1S1Q96B36 256 aa15.83■□□□□ 0.12
DDX41-216ENST00000513562 CHD4Q14839 1912 aa15.83■□□□□ 0.12
DDX41-216ENST00000513562 IL2RBP14784 551 aa15.81■□□□□ 0.12
DDX41-216ENST00000513562 POLD1P28340 1107 aa15.81■□□□□ 0.12
DDX41-216ENST00000513562 NLRP2Q9NX02 1062 aa15.8■□□□□ 0.12
DDX41-216ENST00000513562 RGPD5Q99666 1765 aa15.8■□□□□ 0.12
DDX41-216ENST00000513562 SHANK3Q9BYB0 1731 aa15.8■□□□□ 0.12
DDX41-216ENST00000513562 USP31Q70CQ4 1352 aa15.79■□□□□ 0.12
DDX41-216ENST00000513562 KTN1Q86UP2 1357 aaKnown RBP15.79■□□□□ 0.12
DDX41-216ENST00000513562 PNPLA7Q6ZV29 1317 aa15.79■□□□□ 0.12
DDX41-216ENST00000513562 SLC27A3Q5K4L6 730 aa15.79■□□□□ 0.12
DDX41-216ENST00000513562 KLHL34Q8N239 644 aa15.79■□□□□ 0.12
DDX41-216ENST00000513562 BTAF1O14981 1849 aa15.78■□□□□ 0.12
DDX41-216ENST00000513562 PELP1Q8IZL8 1130 aaKnown RBP15.78■□□□□ 0.12
DDX41-216ENST00000513562 NLGN2Q8NFZ4 835 aa15.78■□□□□ 0.12
DDX41-216ENST00000513562 COL24A1Q17RW2 1714 aa15.77■□□□□ 0.11
DDX41-216ENST00000513562 QSER1Q2KHR3 1735 aa15.75■□□□□ 0.11
DDX41-216ENST00000513562 ANKRD24Q8TF21 1146 aa15.75■□□□□ 0.11
DDX41-216ENST00000513562 TFCP2L1Q9NZI6 479 aa15.75■□□□□ 0.11
DDX41-216ENST00000513562 USP54Q70EL1 1684 aa15.74■□□□□ 0.11
DDX41-216ENST00000513562 GRIN3BO60391 1043 aa15.74■□□□□ 0.11
DDX41-216ENST00000513562 YBX3P16989 372 aaKnown RBP eCLIP15.74■□□□□ 0.112e-8■□□□□ 9.6
DDX41-216ENST00000513562 SBNO2Q9Y2G9 1366 aa15.74■□□□□ 0.11
DDX41-216ENST00000513562 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.73■□□□□ 0.11
DDX41-216ENST00000513562 MON2Q7Z3U7 1717 aa15.72■□□□□ 0.11
DDX41-216ENST00000513562 NME9Q86XW9 330 aa15.72■□□□□ 0.11
DDX41-216ENST00000513562 ANKRD36BQ8N2N9 1353 aa15.72■□□□□ 0.11
DDX41-216ENST00000513562 CD163L1Q9NR16 1453 aa15.71■□□□□ 0.11
DDX41-216ENST00000513562 ATP10DQ9P241 1426 aa15.71■□□□□ 0.11
DDX41-216ENST00000513562 KCNQ4P56696 695 aa15.71■□□□□ 0.11
DDX41-216ENST00000513562 DDX54Q8TDD1 881 aaKnown RBP15.71■□□□□ 0.11
DDX41-216ENST00000513562 L3MBTL2Q969R5 705 aa15.71■□□□□ 0.11
DDX41-216ENST00000513562 NSD2O96028 1365 aa15.71■□□□□ 0.11
DDX41-216ENST00000513562 ROCK2O75116 1388 aaKnown RBP15.7■□□□□ 0.1
DDX41-216ENST00000513562 PRIM1P49642 420 aaKnown RBP15.69■□□□□ 0.1
DDX41-216ENST00000513562 SYTL4Q96C24 671 aaPredicted RBP15.68■□□□□ 0.1
DDX41-216ENST00000513562 ADCY9O60503 1353 aa15.67■□□□□ 0.1
DDX41-216ENST00000513562 TUBGCP6Q96RT7 1819 aa15.67■□□□□ 0.1
DDX41-216ENST00000513562 COL23A1Q86Y22 540 aaPredicted RBP15.67■□□□□ 0.1
DDX41-216ENST00000513562 IP6K1Q92551 441 aa15.67■□□□□ 0.1
DDX41-216ENST00000513562 CCNL1Q9UK58 526 aaPredicted RBP15.67■□□□□ 0.1
DDX41-216ENST00000513562 EDC4Q6P2E9 1401 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms