RNA–Protein interactions for RNA: ENST00000513471.5

C1QTNF3-206, Transcript of C1q and TNF related 3, humanhuman

TSL 1 (best)

Gene C1QTNF3, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-206ENST00000513471 CDHR5Q9HBB8 845 aa11.85□□□□□ -0.51
C1QTNF3-206ENST00000513471 GPCPD1Q9NPB8 672 aa11.85□□□□□ -0.51
C1QTNF3-206ENST00000513471 LHX6Q9UPM6 363 aa11.85□□□□□ -0.51
C1QTNF3-206ENST00000513471 HRO43593 1189 aa11.84□□□□□ -0.51
C1QTNF3-206ENST00000513471 ONECUT3O60422 494 aaPredicted RBP11.84□□□□□ -0.51
C1QTNF3-206ENST00000513471 HSPA5P11021 654 aaKnown RBP11.84□□□□□ -0.51
C1QTNF3-206ENST00000513471 ARID3AQ99856 593 aa11.84□□□□□ -0.51
C1QTNF3-206ENST00000513471 MYOM2P54296 1465 aa11.82□□□□□ -0.52
C1QTNF3-206ENST00000513471 CLTCQ00610 1675 aaKnown RBP11.82□□□□□ -0.52
C1QTNF3-206ENST00000513471 CFAP65Q6ZU64 1925 aaKnown RBP11.82□□□□□ -0.52
C1QTNF3-206ENST00000513471 USP47Q96K76 1375 aa11.82□□□□□ -0.52
C1QTNF3-206ENST00000513471 PREX1Q8TCU6 1659 aa11.82□□□□□ -0.52
C1QTNF3-206ENST00000513471 ADGRB3O60242 1522 aa11.82□□□□□ -0.52
C1QTNF3-206ENST00000513471 ERVK-7P63135 1459 aa11.81□□□□□ -0.52
C1QTNF3-206ENST00000513471 ZMYM3Q14202 1370 aa11.81□□□□□ -0.52
C1QTNF3-206ENST00000513471 ARHGAP33O14559 1287 aa11.81□□□□□ -0.52
C1QTNF3-206ENST00000513471 HDGFP51858 240 aaKnown RBP11.81□□□□□ -0.52
C1QTNF3-206ENST00000513471 REPIN1Q9BWE0 567 aaKnown RBP11.81□□□□□ -0.52
C1QTNF3-206ENST00000513471 TK2O00142 265 aa11.8□□□□□ -0.52
C1QTNF3-206ENST00000513471 APBB1O00213 710 aa11.8□□□□□ -0.52
C1QTNF3-206ENST00000513471 MDM2Q00987 491 aaPredicted RBP11.8□□□□□ -0.52
C1QTNF3-206ENST00000513471 KCTD12Q96CX2 325 aaKnown RBP11.8□□□□□ -0.52
C1QTNF3-206ENST00000513471 TMUB1Q9BVT8 246 aa11.8□□□□□ -0.52
C1QTNF3-206ENST00000513471 C1orf115Q9H7X2 142 aa11.8□□□□□ -0.52
C1QTNF3-206ENST00000513471 NPDC1Q9NQX5 325 aaPredicted RBP11.8□□□□□ -0.52
C1QTNF3-206ENST00000513471 PIK3C2BO00750 1634 aa11.8□□□□□ -0.52
C1QTNF3-206ENST00000513471 GPRASP1Q5JY77 1395 aa11.8□□□□□ -0.52
C1QTNF3-206ENST00000513471 A6NJR5 290 aa11.79□□□□□ -0.52
C1QTNF3-206ENST00000513471 IDI1Q13907 227 aa11.79□□□□□ -0.52
C1QTNF3-206ENST00000513471 TYW1BQ6NUM6 668 aa11.79□□□□□ -0.52
C1QTNF3-206ENST00000513471 LAMC1P11047 1609 aa11.79□□□□□ -0.52
C1QTNF3-206ENST00000513471 TRPM1Q7Z4N2 1603 aa11.79□□□□□ -0.52
C1QTNF3-206ENST00000513471 UGGT1Q9NYU2 1555 aa11.79□□□□□ -0.52
C1QTNF3-206ENST00000513471 EIF3AQ14152 1382 aaKnown RBP11.79□□□□□ -0.52
C1QTNF3-206ENST00000513471 MROH2AA6NES4 1674 aa11.79□□□□□ -0.52
C1QTNF3-206ENST00000513471 FBXW7Q969H0 707 aa11.79□□□□□ -0.52
C1QTNF3-206ENST00000513471 RBM33Q96EV2 1170 aaKnown RBP11.79□□□□□ -0.52
C1QTNF3-206ENST00000513471 SYNMO15061 1565 aa11.79□□□□□ -0.52
C1QTNF3-206ENST00000513471 SPATA31D1Q6ZQQ2 1576 aa11.79□□□□□ -0.52
C1QTNF3-206ENST00000513471 HIRIP3Q9BW71 556 aaPredicted RBP11.78□□□□□ -0.52
C1QTNF3-206ENST00000513471 PODXL2Q9NZ53 605 aa11.78□□□□□ -0.52
C1QTNF3-206ENST00000513471 KIAA1210Q9ULL0 1709 aa11.77□□□□□ -0.52
C1QTNF3-206ENST00000513471 SIGLEC1Q9BZZ2 1709 aa11.77□□□□□ -0.53
C1QTNF3-206ENST00000513471 A0A0G2JS52 829 aa11.77□□□□□ -0.53
C1QTNF3-206ENST00000513471 SSTR3P32745 418 aaPredicted RBP11.77□□□□□ -0.53
C1QTNF3-206ENST00000513471 PCDHGA10Q9Y5H3 936 aa11.77□□□□□ -0.53
C1QTNF3-206ENST00000513471 MADDQ8WXG6 1647 aa11.76□□□□□ -0.53
C1QTNF3-206ENST00000513471 DDX10Q13206 875 aaKnown RBP11.76□□□□□ -0.53
C1QTNF3-206ENST00000513471 MCM6Q14566 821 aa11.76□□□□□ -0.53
C1QTNF3-206ENST00000513471 SKIV2LQ15477 1246 aaKnown RBP11.76□□□□□ -0.53
C1QTNF3-206ENST00000513471 FBXO31Q5XUX0 539 aaPredicted RBP11.76□□□□□ -0.53
C1QTNF3-206ENST00000513471 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.76□□□□□ -0.53
C1QTNF3-206ENST00000513471 CERKQ8TCT0 537 aa11.76□□□□□ -0.53
C1QTNF3-206ENST00000513471 TNRQ92752 1358 aa11.75□□□□□ -0.53
C1QTNF3-206ENST00000513471 OATP04181 439 aa11.75□□□□□ -0.53
C1QTNF3-206ENST00000513471 TSR1Q2NL82 804 aaKnown RBP11.75□□□□□ -0.53
C1QTNF3-206ENST00000513471 CDCA8Q53HL2 280 aa11.75□□□□□ -0.53
C1QTNF3-206ENST00000513471 ZFYVE9O95405 1425 aa11.75□□□□□ -0.53
C1QTNF3-206ENST00000513471 IFT172Q9UG01 1749 aa11.74□□□□□ -0.53
C1QTNF3-206ENST00000513471 BEGAINQ9BUH8 593 aa11.74□□□□□ -0.53
C1QTNF3-206ENST00000513471 SCAF11Q99590 1463 aaKnown RBP11.73□□□□□ -0.53
C1QTNF3-206ENST00000513471 NRXN1Q9ULB1 1477 aa11.73□□□□□ -0.53
C1QTNF3-206ENST00000513471 ST20-MTHFSA0A0A6YYL1 179 aa11.73□□□□□ -0.53
C1QTNF3-206ENST00000513471 ANP32CO43423 234 aa11.73□□□□□ -0.53
C1QTNF3-206ENST00000513471 NBPF1Q3BBV0 1214 aa11.73□□□□□ -0.53
C1QTNF3-206ENST00000513471 CLUAP1Q96AJ1 413 aa11.73□□□□□ -0.53
C1QTNF3-206ENST00000513471 PPLO60437 1756 aa11.73□□□□□ -0.53
C1QTNF3-206ENST00000513471 CCDC7Q96M83 1385 aa11.73□□□□□ -0.53
C1QTNF3-206ENST00000513471 NLRP1Q9C000 1473 aa11.73□□□□□ -0.53
C1QTNF3-206ENST00000513471 ADGRF5Q8IZF2 1346 aa11.72□□□□□ -0.53
C1QTNF3-206ENST00000513471 FER1L4A9Z1Z3 1794 aa11.72□□□□□ -0.53
C1QTNF3-206ENST00000513471 TMEM131LA2VDJ0 1609 aa11.72□□□□□ -0.53
C1QTNF3-206ENST00000513471 TRAK2O60296 914 aa11.72□□□□□ -0.53
C1QTNF3-206ENST00000513471 TMF1P82094 1093 aa11.72□□□□□ -0.53
C1QTNF3-206ENST00000513471 METTL3Q86U44 580 aaKnown RBP11.72□□□□□ -0.53
C1QTNF3-206ENST00000513471 PHOX2BQ99453 314 aa11.72□□□□□ -0.53
C1QTNF3-206ENST00000513471 C14orf93Q9H972 538 aaKnown RBP11.72□□□□□ -0.53
C1QTNF3-206ENST00000513471 FAM217BQ9NTX9 383 aaPredicted RBP11.72□□□□□ -0.53
C1QTNF3-206ENST00000513471 PIK3C2GO75747 1445 aa11.71□□□□□ -0.53
C1QTNF3-206ENST00000513471 POLR1AO95602 1720 aaPredicted RBP11.71□□□□□ -0.53
C1QTNF3-206ENST00000513471 DMRTA1Q5VZB9 504 aa11.71□□□□□ -0.53
C1QTNF3-206ENST00000513471 PCDHGA4Q9Y5G9 962 aa11.71□□□□□ -0.53
C1QTNF3-206ENST00000513471 SETBP1Q9Y6X0 1596 aa11.71□□□□□ -0.53
C1QTNF3-206ENST00000513471 WASHC2AQ641Q2 1341 aa11.71□□□□□ -0.54
C1QTNF3-206ENST00000513471 NEXMIFQ5QGS0 1516 aa11.71□□□□□ -0.54
C1QTNF3-206ENST00000513471 CFAP70Q5T0N1 1121 aa11.7□□□□□ -0.54
C1QTNF3-206ENST00000513471 KDM5AP29375 1690 aaKnown RBP11.7□□□□□ -0.54
C1QTNF3-206ENST00000513471 Q6ZNB5 142 aa11.69□□□□□ -0.54
C1QTNF3-206ENST00000513471 POLR3GLQ9BT43 218 aa11.69□□□□□ -0.54
C1QTNF3-206ENST00000513471 KIF7Q2M1P5 1343 aa11.69□□□□□ -0.54
C1QTNF3-206ENST00000513471 A2ML1A8K2U0 1454 aa11.69□□□□□ -0.54
C1QTNF3-206ENST00000513471 RAD21O60216 631 aa11.68□□□□□ -0.54
C1QTNF3-206ENST00000513471 RBM27Q9P2N5 1060 aaKnown RBP11.68□□□□□ -0.54
C1QTNF3-206ENST00000513471 PADI6Q6TGC4 694 aa11.67□□□□□ -0.54
C1QTNF3-206ENST00000513471 EID1Q9Y6B2 187 aa11.67□□□□□ -0.54
C1QTNF3-206ENST00000513471 RIMS2Q9UQ26 1411 aa11.67□□□□□ -0.54
C1QTNF3-206ENST00000513471 PTPN5P54829 565 aa11.67□□□□□ -0.54
C1QTNF3-206ENST00000513471 DIXDC1Q155Q3 683 aa11.67□□□□□ -0.54
C1QTNF3-206ENST00000513471 PROSER2Q86WR7 435 aaPredicted RBP11.67□□□□□ -0.54
C1QTNF3-206ENST00000513471 THEMISQ8N1K5 641 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms