RNA–Protein interactions for RNA: ENST00000513433.1

SNX25-206, Transcript of sorting nexin 25, humanhuman

TSL 3

Gene SNX25, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-206ENST00000513433 LINC00528Q8N1L1 170 aa10.18□□□□□ -0.78
SNX25-206ENST00000513433 IRF7Q92985 503 aa10.18□□□□□ -0.78
SNX25-206ENST00000513433 AP1G2O75843 785 aa10.17□□□□□ -0.78
SNX25-206ENST00000513433 VSIG8P0DPA2 414 aa10.17□□□□□ -0.78
SNX25-206ENST00000513433 RFC5P40937 340 aa10.17□□□□□ -0.78
SNX25-206ENST00000513433 PTK2Q05397 1052 aa10.17□□□□□ -0.78
SNX25-206ENST00000513433 Q6ZVU0 165 aa10.17□□□□□ -0.78
SNX25-206ENST00000513433 CARD14Q9BXL6 1004 aa10.17□□□□□ -0.78
SNX25-206ENST00000513433 USP17L8P0C7I0 530 aa10.16□□□□□ -0.78
SNX25-206ENST00000513433 TSEN34Q9BSV6 310 aaKnown RBP10.16□□□□□ -0.78
SNX25-206ENST00000513433 SOS2Q07890 1332 aaPredicted RBP10.15□□□□□ -0.78
SNX25-206ENST00000513433 LORP23490 312 aaPredicted RBP10.15□□□□□ -0.78
SNX25-206ENST00000513433 PPP1R26Q5T8A7 1209 aaPredicted RBP10.15□□□□□ -0.78
SNX25-206ENST00000513433 KCTD15Q96SI1 283 aaPredicted RBP10.15□□□□□ -0.78
SNX25-206ENST00000513433 HMX1Q9NP08 348 aaPredicted RBP10.15□□□□□ -0.78
SNX25-206ENST00000513433 UPP2O95045 317 aa10.14□□□□□ -0.79
SNX25-206ENST00000513433 ZBTB33Q86T24 672 aa10.14□□□□□ -0.79
SNX25-206ENST00000513433 EPS8L1Q8TE68 723 aa10.14□□□□□ -0.79
SNX25-206ENST00000513433 SLC10A4Q96EP9 437 aa10.14□□□□□ -0.79
SNX25-206ENST00000513433 ERBB4Q15303 1308 aa10.13□□□□□ -0.79
SNX25-206ENST00000513433 GMPRP36959 345 aa10.13□□□□□ -0.79
SNX25-206ENST00000513433 DHX9Q08211 1270 aaKnown RBP10.13□□□□□ -0.79
SNX25-206ENST00000513433 TMEM259Q4ZIN3 620 aa10.13□□□□□ -0.79
SNX25-206ENST00000513433 PNMA1Q8ND90 353 aa10.13□□□□□ -0.79
SNX25-206ENST00000513433 PGPEP1Q9NXJ5 209 aa10.13□□□□□ -0.79
SNX25-206ENST00000513433 SOBPA7XYQ1 873 aa10.12□□□□□ -0.79
SNX25-206ENST00000513433 BMP2P12643 396 aa10.12□□□□□ -0.79
SNX25-206ENST00000513433 C6orf118Q5T5N4 469 aa10.12□□□□□ -0.79
SNX25-206ENST00000513433 ADAM32Q8TC27 787 aa10.12□□□□□ -0.79
SNX25-206ENST00000513433 TRIM34Q9BYJ4 488 aa10.12□□□□□ -0.79
SNX25-206ENST00000513433 INTS6LQ5JSJ4 861 aaKnown RBP10.11□□□□□ -0.79
SNX25-206ENST00000513433 PCMTD1Q96MG8 357 aaPredicted RBP10.11□□□□□ -0.79
SNX25-206ENST00000513433 SPINT1O43278 529 aa10.1□□□□□ -0.79
SNX25-206ENST00000513433 MAN1A2O60476 641 aa10.1□□□□□ -0.79
SNX25-206ENST00000513433 VEGFBP49765 207 aa10.1□□□□□ -0.79
SNX25-206ENST00000513433 DNMT3LQ9UJW3 386 aa10.1□□□□□ -0.79
SNX25-206ENST00000513433 ESPNB1AK53 854 aa10.09□□□□□ -0.79
SNX25-206ENST00000513433 SOCS7O14512 581 aa10.09□□□□□ -0.79
SNX25-206ENST00000513433 NBPF20Q3BBV1 942 aa10.08□□□□□ -0.8
SNX25-206ENST00000513433 PPFIA3O75145 1194 aa10.07□□□□□ -0.8
SNX25-206ENST00000513433 CBLBQ13191 982 aa10.07□□□□□ -0.8
SNX25-206ENST00000513433 BRPF1P55201 1214 aaPredicted RBP10.06□□□□□ -0.8
SNX25-206ENST00000513433 NEUROD2Q15784 382 aa10.06□□□□□ -0.8
SNX25-206ENST00000513433 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.06□□□□□ -0.8
SNX25-206ENST00000513433 GJD4Q96KN9 370 aaPredicted RBP10.06□□□□□ -0.8
SNX25-206ENST00000513433 TTLL8A6PVC2 850 aa10.05□□□□□ -0.8
SNX25-206ENST00000513433 SEPT12Q8IYM1 358 aa10.05□□□□□ -0.8
SNX25-206ENST00000513433 ATP1B4Q9UN42 357 aaPredicted RBP10.05□□□□□ -0.8
SNX25-206ENST00000513433 ZSCAN1Q8NBB4 408 aa10.04□□□□□ -0.8
SNX25-206ENST00000513433 LILRA1O75019 489 aa10.03□□□□□ -0.8
SNX25-206ENST00000513433 BANK1Q8NDB2 785 aa10.03□□□□□ -0.8
SNX25-206ENST00000513433 IL27Q8NEV9 243 aa10.03□□□□□ -0.8
SNX25-206ENST00000513433 DZIP3Q86Y13 1208 aaKnown RBP10.01□□□□□ -0.81
SNX25-206ENST00000513433 CCDC125Q86Z20 511 aa10.01□□□□□ -0.81
SNX25-206ENST00000513433 KDF1Q8NAX2 398 aaPredicted RBP10.01□□□□□ -0.81
SNX25-206ENST00000513433 NANOS1Q8WY41 292 aaKnown RBP10.01□□□□□ -0.81
SNX25-206ENST00000513433 CCDC180Q9P1Z9 1646 aa10□□□□□ -0.81
SNX25-206ENST00000513433 FAM181BA6NEQ2 426 aa10□□□□□ -0.81
SNX25-206ENST00000513433 ZBBXA8MT70 800 aa10□□□□□ -0.81
SNX25-206ENST00000513433 ERVH48-1M5A8F1 160 aa10□□□□□ -0.81
SNX25-206ENST00000513433 PTSQ03393 145 aa10□□□□□ -0.81
SNX25-206ENST00000513433 ZNF784Q8NCA9 323 aaPredicted RBP10□□□□□ -0.81
SNX25-206ENST00000513433 ADD1P35611 737 aaKnown RBP9.99□□□□□ -0.81
SNX25-206ENST00000513433 TMPRSS4Q9NRS4 437 aa9.99□□□□□ -0.81
SNX25-206ENST00000513433 SLC35F4A4IF30 521 aa9.98□□□□□ -0.81
SNX25-206ENST00000513433 GPR37L1O60883 481 aa9.98□□□□□ -0.81
SNX25-206ENST00000513433 ADH1AP07327 375 aa9.98□□□□□ -0.81
SNX25-206ENST00000513433 TRIM52Q96A61 297 aa9.98□□□□□ -0.81
SNX25-206ENST00000513433 FBXO45P0C2W1 286 aa9.97□□□□□ -0.81
SNX25-206ENST00000513433 CTSOP43234 321 aaPredicted RBP9.97□□□□□ -0.81
SNX25-206ENST00000513433 MCCD1P59942 119 aaPredicted RBP9.97□□□□□ -0.81
SNX25-206ENST00000513433 AGBL1Q96MI9 1066 aa9.97□□□□□ -0.81
SNX25-206ENST00000513433 PTGIRP43119 386 aa9.96□□□□□ -0.82
SNX25-206ENST00000513433 RELBQ01201 579 aa9.95□□□□□ -0.82
SNX25-206ENST00000513433 CCDC155Q8N6L0 562 aa9.95□□□□□ -0.82
SNX25-206ENST00000513433 RNF217Q8TC41 542 aa9.95□□□□□ -0.82
SNX25-206ENST00000513433 INSM2Q96T92 566 aaPredicted RBP9.95□□□□□ -0.82
SNX25-206ENST00000513433 FIGNL2A6NMB9 653 aa9.94□□□□□ -0.82
SNX25-206ENST00000513433 GIGYF1O75420 1035 aaPredicted RBP9.93□□□□□ -0.82
SNX25-206ENST00000513433 NR1H3Q13133 447 aa9.93□□□□□ -0.82
SNX25-206ENST00000513433 GPR161Q8N6U8 529 aaKnown RBP9.93□□□□□ -0.82
SNX25-206ENST00000513433 MTMR14Q8NCE2 650 aa9.93□□□□□ -0.82
SNX25-206ENST00000513433 KRT76Q01546 638 aa9.92□□□□□ -0.82
SNX25-206ENST00000513433 FOXD4L5Q5VV16 416 aaPredicted RBP9.92□□□□□ -0.82
SNX25-206ENST00000513433 ZNF592Q92610 1267 aa9.92□□□□□ -0.82
SNX25-206ENST00000513433 SENP3-EIF4A1A0A087X0R7 540 aa9.91□□□□□ -0.82
SNX25-206ENST00000513433 ZNF395Q9H8N7 513 aaPredicted RBP9.91□□□□□ -0.82
SNX25-206ENST00000513433 RNF144AP50876 292 aaPredicted RBP9.9□□□□□ -0.82
SNX25-206ENST00000513433 ERVK-9P63128 1117 aa9.9□□□□□ -0.82
SNX25-206ENST00000513433 RNF20Q5VTR2 975 aa9.9□□□□□ -0.82
SNX25-206ENST00000513433 PCDHB9Q9Y5E1 797 aa9.9□□□□□ -0.82
SNX25-206ENST00000513433 ITGA6P23229 1130 aa9.89□□□□□ -0.83
SNX25-206ENST00000513433 RAB15P59190 212 aa9.89□□□□□ -0.83
SNX25-206ENST00000513433 POLMQ9NP87 494 aaPredicted RBP9.89□□□□□ -0.83
SNX25-206ENST00000513433 NDUFB9Q9Y6M9 179 aa9.89□□□□□ -0.83
SNX25-206ENST00000513433 APBB1O00213 710 aa9.88□□□□□ -0.83
SNX25-206ENST00000513433 GPC1P35052 558 aa9.88□□□□□ -0.83
SNX25-206ENST00000513433 CYLDQ9NQC7 956 aa9.88□□□□□ -0.83
SNX25-206ENST00000513433 SNRKQ9NRH2 765 aa9.87□□□□□ -0.83
SNX25-206ENST00000513433 CC2D2BQ6DHV5 1058 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms