RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 DDRGK1Q96HY6 314 aa7.72□□□□□ -1.17
HTT-211ENST00000513326 ADGRG1Q9Y653 693 aa7.72□□□□□ -1.17
HTT-211ENST00000513326 ADGRB3O60242 1522 aa7.72□□□□□ -1.17
HTT-211ENST00000513326 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.72□□□□□ -1.17
HTT-211ENST00000513326 CHD2O14647 1828 aaKnown RBP7.71□□□□□ -1.17
HTT-211ENST00000513326 TSPY4P0CV99 314 aa7.71□□□□□ -1.18
HTT-211ENST00000513326 TSPY10P0CW01 314 aa7.71□□□□□ -1.18
HTT-211ENST00000513326 METTL3Q86U44 580 aaKnown RBP7.71□□□□□ -1.18
HTT-211ENST00000513326 FAM117AQ9C073 453 aa7.71□□□□□ -1.18
HTT-211ENST00000513326 DUOX2Q9NRD8 1548 aa7.71□□□□□ -1.18
HTT-211ENST00000513326 MYO5BQ9ULV0 1848 aa7.71□□□□□ -1.18
HTT-211ENST00000513326 ZFYVE9O95405 1425 aa7.7□□□□□ -1.18
HTT-211ENST00000513326 PPP1R3GB7ZBB8 358 aa7.7□□□□□ -1.18
HTT-211ENST00000513326 COL9A1P20849 921 aa7.7□□□□□ -1.18
HTT-211ENST00000513326 GIGYF2Q6Y7W6 1299 aaKnown RBP7.7□□□□□ -1.18
HTT-211ENST00000513326 ERICH6Q7L0X2 663 aa7.7□□□□□ -1.18
HTT-211ENST00000513326 DDX17Q92841 729 aaKnown RBP7.7□□□□□ -1.18
HTT-211ENST00000513326 PHOX2BQ99453 314 aa7.7□□□□□ -1.18
HTT-211ENST00000513326 GPCPD1Q9NPB8 672 aa7.7□□□□□ -1.18
HTT-211ENST00000513326 KIF15Q9NS87 1388 aa7.7□□□□□ -1.18
HTT-211ENST00000513326 FAM161AQ3B820 660 aa7.69□□□□□ -1.18
HTT-211ENST00000513326 RSPH4AQ5TD94 716 aa7.69□□□□□ -1.18
HTT-211ENST00000513326 NUTM2DQ5VT03 806 aaPredicted RBP7.69□□□□□ -1.18
HTT-211ENST00000513326 BRINP3Q76B58 766 aa7.69□□□□□ -1.18
HTT-211ENST00000513326 RBM46Q8TBY0 533 aaKnown RBP7.69□□□□□ -1.18
HTT-211ENST00000513326 PXYLP1Q8TE99 480 aa7.69□□□□□ -1.18
HTT-211ENST00000513326 TMUB1Q9BVT8 246 aa7.69□□□□□ -1.18
HTT-211ENST00000513326 NOS1P29475 1434 aa7.69□□□□□ -1.18
HTT-211ENST00000513326 ASXL1Q8IXJ9 1541 aa7.68□□□□□ -1.18
HTT-211ENST00000513326 MDM2Q00987 491 aaPredicted RBP7.68□□□□□ -1.18
HTT-211ENST00000513326 C8orf37Q96NL8 207 aa7.68□□□□□ -1.18
HTT-211ENST00000513326 REPIN1Q9BWE0 567 aaKnown RBP7.68□□□□□ -1.18
HTT-211ENST00000513326 RRP7BPQ9NSQ0 103 aa7.68□□□□□ -1.18
HTT-211ENST00000513326 ADAMTS13Q76LX8 1427 aa7.68□□□□□ -1.18
HTT-211ENST00000513326 PLEKHG3A1L390 1219 aa7.67□□□□□ -1.18
HTT-211ENST00000513326 C14orf37Q86TY3 774 aa7.67□□□□□ -1.18
HTT-211ENST00000513326 QTRT2Q9H974 415 aaKnown RBP7.67□□□□□ -1.18
HTT-211ENST00000513326 PLEKHG1Q9ULL1 1385 aa7.67□□□□□ -1.18
HTT-211ENST00000513326 ABCC5O15440 1437 aa7.67□□□□□ -1.18
HTT-211ENST00000513326 PTPRUQ92729 1446 aa7.67□□□□□ -1.18
HTT-211ENST00000513326 ERBINQ96RT1 1412 aa7.67□□□□□ -1.18
HTT-211ENST00000513326 RIMS2Q9UQ26 1411 aa7.67□□□□□ -1.18
HTT-211ENST00000513326 LMTK2Q8IWU2 1503 aa7.67□□□□□ -1.18
HTT-211ENST00000513326 NHSL1Q5SYE7 1610 aa7.67□□□□□ -1.18
HTT-211ENST00000513326 GCC2Q8IWJ2 1684 aa7.67□□□□□ -1.18
HTT-211ENST00000513326 MS4A1P11836 297 aa7.66□□□□□ -1.18
HTT-211ENST00000513326 RBM6P78332 1123 aaKnown RBP7.66□□□□□ -1.18
HTT-211ENST00000513326 KANK4Q5T7N3 995 aaPredicted RBP7.66□□□□□ -1.18
HTT-211ENST00000513326 PNPLA6Q8IY17 1366 aa7.66□□□□□ -1.18
HTT-211ENST00000513326 SETD5Q9C0A6 1442 aa7.66□□□□□ -1.18
HTT-211ENST00000513326 CROCC2H7BZ55 1655 aa7.66□□□□□ -1.18
HTT-211ENST00000513326 TMEM131LA2VDJ0 1609 aa7.65□□□□□ -1.18
HTT-211ENST00000513326 TRIM6-TRIM34B2RNG4 842 aa7.65□□□□□ -1.18
HTT-211ENST00000513326 ADAMTS2O95450 1211 aa7.65□□□□□ -1.18
HTT-211ENST00000513326 ERBB3P21860 1342 aa7.65□□□□□ -1.18
HTT-211ENST00000513326 SSTR3P32745 418 aaPredicted RBP7.65□□□□□ -1.18
HTT-211ENST00000513326 PACS2Q86VP3 889 aa7.65□□□□□ -1.18
HTT-211ENST00000513326 EP400Q96L91 3159 aa7.65□□□□□ -1.18
HTT-211ENST00000513326 KCNK17Q96T54 332 aa7.65□□□□□ -1.18
HTT-211ENST00000513326 FAM198AQ9UFP1 575 aa7.65□□□□□ -1.18
HTT-211ENST00000513326 TSKSQ9UJT2 592 aa7.65□□□□□ -1.18
HTT-211ENST00000513326 MST1RQ04912 1400 aa7.64□□□□□ -1.19
HTT-211ENST00000513326 ATAD2Q6PL18 1390 aa7.64□□□□□ -1.19
HTT-211ENST00000513326 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.64□□□□□ -1.19
HTT-211ENST00000513326 ONECUT3O60422 494 aaPredicted RBP7.64□□□□□ -1.19
HTT-211ENST00000513326 ATF3P18847 181 aa7.64□□□□□ -1.19
HTT-211ENST00000513326 EYA1Q99502 592 aa7.64□□□□□ -1.19
HTT-211ENST00000513326 C19orf44Q9H6X5 657 aa7.64□□□□□ -1.19
HTT-211ENST00000513326 GOPCQ9HD26 462 aa7.64□□□□□ -1.19
HTT-211ENST00000513326 MYOM3Q5VTT5 1437 aa7.63□□□□□ -1.19
HTT-211ENST00000513326 NCOA3Q9Y6Q9 1424 aa7.63□□□□□ -1.19
HTT-211ENST00000513326 NBPF26B4DH59 902 aa7.63□□□□□ -1.19
HTT-211ENST00000513326 ST18O60284 1047 aa7.63□□□□□ -1.19
HTT-211ENST00000513326 PPP1R15AO75807 674 aaPredicted RBP7.63□□□□□ -1.19
HTT-211ENST00000513326 VARS2Q5ST30 1063 aaKnown RBP7.63□□□□□ -1.19
HTT-211ENST00000513326 FAM217BQ9NTX9 383 aaPredicted RBP7.63□□□□□ -1.19
HTT-211ENST00000513326 TIMELESSQ9UNS1 1208 aa7.63□□□□□ -1.19
HTT-211ENST00000513326 NUDT18Q6ZVK8 323 aa7.62□□□□□ -1.19
HTT-211ENST00000513326 NLRP7Q8WX94 980 aa7.62□□□□□ -1.19
HTT-211ENST00000513326 TATDN2Q93075 761 aa7.62□□□□□ -1.19
HTT-211ENST00000513326 TBX22Q9Y458 520 aa7.62□□□□□ -1.19
HTT-211ENST00000513326 TRPM2O94759 1503 aa7.62□□□□□ -1.19
HTT-211ENST00000513326 DAPK1P53355 1430 aa7.61□□□□□ -1.19
HTT-211ENST00000513326 XRN1Q8IZH2 1706 aaKnown RBP7.61□□□□□ -1.19
HTT-211ENST00000513326 KANK1Q14678 1352 aa7.61□□□□□ -1.19
HTT-211ENST00000513326 NRXN3Q9Y4C0 1643 aa7.61□□□□□ -1.19
HTT-211ENST00000513326 RCCD1A6NED2 376 aa7.61□□□□□ -1.19
HTT-211ENST00000513326 ARHGAP33O14559 1287 aa7.61□□□□□ -1.19
HTT-211ENST00000513326 EMP3P54852 163 aa7.61□□□□□ -1.19
HTT-211ENST00000513326 NGLY1Q96IV0 654 aa7.61□□□□□ -1.19
HTT-211ENST00000513326 PNMA3Q9UL41 463 aa7.61□□□□□ -1.19
HTT-211ENST00000513326 ATRNO75882 1429 aa7.61□□□□□ -1.19
HTT-211ENST00000513326 UNC13BO14795 1591 aa7.6□□□□□ -1.19
HTT-211ENST00000513326 DNAJB2P25686 324 aa7.6□□□□□ -1.19
HTT-211ENST00000513326 PROX2Q3B8N5 592 aa7.6□□□□□ -1.19
HTT-211ENST00000513326 ZBED2Q9BTP6 218 aa7.6□□□□□ -1.19
HTT-211ENST00000513326 BEGAINQ9BUH8 593 aa7.6□□□□□ -1.19
HTT-211ENST00000513326 RSPH6AQ9H0K4 717 aa7.6□□□□□ -1.19
HTT-211ENST00000513326 CHIC2Q9UKJ5 165 aa7.6□□□□□ -1.19
HTT-211ENST00000513326 AMOTL2Q9Y2J4 779 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms