RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 NGDNQ8NEJ9 315 aaKnown RBP14.57□□□□□ -0.08
PTPN20-228ENST00000513266 ADCY9O60503 1353 aa14.57□□□□□ -0.08
PTPN20-228ENST00000513266 CPDO75976 1380 aa14.57□□□□□ -0.08
PTPN20-228ENST00000513266 CRB1P82279 1406 aa14.57□□□□□ -0.08
PTPN20-228ENST00000513266 DDB1Q16531 1140 aa14.56□□□□□ -0.08
PTPN20-228ENST00000513266 RGL3Q3MIN7 710 aa14.56□□□□□ -0.08
PTPN20-228ENST00000513266 MARCH10Q8NA82 808 aaPredicted RBP14.56□□□□□ -0.08
PTPN20-228ENST00000513266 TUBGCP6Q96RT7 1819 aa14.56□□□□□ -0.08
PTPN20-228ENST00000513266 HIRIP3Q9BW71 556 aaPredicted RBP14.55□□□□□ -0.08
PTPN20-228ENST00000513266 GRIN3BO60391 1043 aa14.54□□□□□ -0.08
PTPN20-228ENST00000513266 ZNF526Q8TF50 670 aaPredicted RBP14.54□□□□□ -0.08
PTPN20-228ENST00000513266 C14orf93Q9H972 538 aaKnown RBP14.54□□□□□ -0.08
PTPN20-228ENST00000513266 NHSQ6T4R5 1651 aa14.54□□□□□ -0.08
PTPN20-228ENST00000513266 KAT6BQ8WYB5 2073 aa14.53□□□□□ -0.08
PTPN20-228ENST00000513266 WDR90Q96KV7 1748 aa14.53□□□□□ -0.08
PTPN20-228ENST00000513266 APLP1P51693 650 aa14.53□□□□□ -0.08
PTPN20-228ENST00000513266 EIF3AQ14152 1382 aaKnown RBP14.52□□□□□ -0.08
PTPN20-228ENST00000513266 ZNF827Q17R98 1081 aa14.52□□□□□ -0.09
PTPN20-228ENST00000513266 POGKQ9P215 609 aa14.52□□□□□ -0.09
PTPN20-228ENST00000513266 BTAF1O14981 1849 aa14.52□□□□□ -0.09
PTPN20-228ENST00000513266 CFAP70Q5T0N1 1121 aa14.51□□□□□ -0.09
PTPN20-228ENST00000513266 TNS4Q8IZW8 715 aa14.51□□□□□ -0.09
PTPN20-228ENST00000513266 MINK1Q8N4C8 1332 aaPredicted RBP14.5□□□□□ -0.09
PTPN20-228ENST00000513266 KIF3CO14782 793 aa14.5□□□□□ -0.09
PTPN20-228ENST00000513266 COL18A1P39060 1754 aa14.5□□□□□ -0.09
PTPN20-228ENST00000513266 USP19O94966 1318 aa14.49□□□□□ -0.09
PTPN20-228ENST00000513266 POLD1P28340 1107 aa14.49□□□□□ -0.09
PTPN20-228ENST00000513266 RGPD5Q99666 1765 aa14.49□□□□□ -0.09
PTPN20-228ENST00000513266 WASLO00401 505 aaPredicted RBP14.48□□□□□ -0.09
PTPN20-228ENST00000513266 SLC16A10Q8TF71 515 aa14.48□□□□□ -0.09
PTPN20-228ENST00000513266 ARHGEF28Q8N1W1 1705 aaKnown RBP14.48□□□□□ -0.09
PTPN20-228ENST00000513266 SLC4A1APQ9BWU0 796 aaKnown RBP14.47□□□□□ -0.09
PTPN20-228ENST00000513266 PCNTO95613 3336 aa14.46□□□□□ -0.09
PTPN20-228ENST00000513266 ADGRB1O14514 1584 aa14.46□□□□□ -0.09
PTPN20-228ENST00000513266 LRRC4BQ9NT99 713 aa14.45□□□□□ -0.1
PTPN20-228ENST00000513266 POLR3AO14802 1390 aaPredicted RBP14.45□□□□□ -0.1
PTPN20-228ENST00000513266 PNPLA7Q6ZV29 1317 aa14.44□□□□□ -0.1
PTPN20-228ENST00000513266 GCP02774 474 aa14.44□□□□□ -0.1
PTPN20-228ENST00000513266 TOM1L2Q6ZVM7 507 aa14.44□□□□□ -0.1
PTPN20-228ENST00000513266 ABTB2Q8N961 1025 aa14.44□□□□□ -0.1
PTPN20-228ENST00000513266 JMYQ8N9B5 988 aa14.44□□□□□ -0.1
PTPN20-228ENST00000513266 AKT1S1Q96B36 256 aa14.44□□□□□ -0.1
PTPN20-228ENST00000513266 NUDT16Q96DE0 195 aaKnown RBP14.42□□□□□ -0.1
PTPN20-228ENST00000513266 CDCA7Q9BWT1 371 aaPredicted RBP14.42□□□□□ -0.1
PTPN20-228ENST00000513266 KLRG1Q96E93 195 aa14.41□□□□□ -0.1
PTPN20-228ENST00000513266 TRAK1Q9UPV9 953 aa14.41□□□□□ -0.1
PTPN20-228ENST00000513266 ACEP12821 1306 aa14.41□□□□□ -0.1
PTPN20-228ENST00000513266 ACSBG1Q96GR2 724 aa14.4□□□□□ -0.1
PTPN20-228ENST00000513266 TNS2Q63HR2 1409 aa14.4□□□□□ -0.1
PTPN20-228ENST00000513266 WDR17Q8IZU2 1322 aa14.4□□□□□ -0.1
PTPN20-228ENST00000513266 BRD4O60885 1362 aaPredicted RBP14.39□□□□□ -0.11
PTPN20-228ENST00000513266 ZBTB7CA1YPR0 619 aa14.39□□□□□ -0.11
PTPN20-228ENST00000513266 HTRA3P83110 453 aa14.39□□□□□ -0.11
PTPN20-228ENST00000513266 USP6P35125 1406 aa14.39□□□□□ -0.11
PTPN20-228ENST00000513266 TRPM1Q7Z4N2 1603 aa14.38□□□□□ -0.11
PTPN20-228ENST00000513266 SLIT3O75094 1523 aa14.38□□□□□ -0.11
PTPN20-228ENST00000513266 TOMM70O94826 608 aa14.38□□□□□ -0.11
PTPN20-228ENST00000513266 NLRP13Q86W25 1043 aa14.38□□□□□ -0.11
PTPN20-228ENST00000513266 PCDH10Q9P2E7 1040 aa14.38□□□□□ -0.11
PTPN20-228ENST00000513266 ABCC6O95255 1503 aa14.37□□□□□ -0.11
PTPN20-228ENST00000513266 EXOC5O00471 708 aa14.37□□□□□ -0.11
PTPN20-228ENST00000513266 AXIN2Q9Y2T1 843 aa14.37□□□□□ -0.11
PTPN20-228ENST00000513266 LY75O60449 1722 aa14.35□□□□□ -0.11
PTPN20-228ENST00000513266 WWC3Q9ULE0 1092 aa14.35□□□□□ -0.11
PTPN20-228ENST00000513266 PIK3C2AO00443 1686 aa14.35□□□□□ -0.11
PTPN20-228ENST00000513266 CARD10Q9BWT7 1032 aa14.34□□□□□ -0.11
PTPN20-228ENST00000513266 TFCP2L1Q9NZI6 479 aa14.34□□□□□ -0.11
PTPN20-228ENST00000513266 PLEKHG3A1L390 1219 aa14.33□□□□□ -0.12
PTPN20-228ENST00000513266 CD2APQ9Y5K6 639 aa14.33□□□□□ -0.12
PTPN20-228ENST00000513266 CICQ96RK0 1608 aaPredicted RBP14.33□□□□□ -0.12
PTPN20-228ENST00000513266 KCNQ4P56696 695 aa14.32□□□□□ -0.12
PTPN20-228ENST00000513266 CCDC61Q9Y6R9 512 aa14.32□□□□□ -0.12
PTPN20-228ENST00000513266 SLC27A3Q5K4L6 730 aa14.31□□□□□ -0.12
PTPN20-228ENST00000513266 CDK19Q9BWU1 502 aa14.31□□□□□ -0.12
PTPN20-228ENST00000513266 CPSF1Q10570 1443 aaKnown RBP14.31□□□□□ -0.12
PTPN20-228ENST00000513266 PPIP5K1Q6PFW1 1433 aa14.31□□□□□ -0.12
PTPN20-228ENST00000513266 MSL1Q68DK7 614 aa14.3□□□□□ -0.12
PTPN20-228ENST00000513266 CCDC7Q96M83 1385 aa14.3□□□□□ -0.12
PTPN20-228ENST00000513266 COL23A1Q86Y22 540 aaPredicted RBP14.29□□□□□ -0.12
PTPN20-228ENST00000513266 NMRK2Q9NPI5 230 aa14.29□□□□□ -0.12
PTPN20-228ENST00000513266 NLRP6P59044 892 aa14.28□□□□□ -0.12
PTPN20-228ENST00000513266 RBM46Q8TBY0 533 aaKnown RBP14.28□□□□□ -0.12
PTPN20-228ENST00000513266 IGSF1Q8N6C5 1336 aa14.27□□□□□ -0.12
PTPN20-228ENST00000513266 CSB-PGBD3P0DP91 1061 aa14.27□□□□□ -0.13
PTPN20-228ENST00000513266 MSH5O43196 834 aa14.26□□□□□ -0.13
PTPN20-228ENST00000513266 HSPA1AP0DMV8 641 aaKnown RBP14.26□□□□□ -0.13
PTPN20-228ENST00000513266 HSPA1BP0DMV9 641 aaKnown RBP14.26□□□□□ -0.13
PTPN20-228ENST00000513266 ARHGEF25Q86VW2 580 aa14.26□□□□□ -0.13
PTPN20-228ENST00000513266 QRICH2Q9H0J4 1663 aa14.26□□□□□ -0.13
PTPN20-228ENST00000513266 DOT1LQ8TEK3 1739 aa14.25□□□□□ -0.13
PTPN20-228ENST00000513266 USP54Q70EL1 1684 aa14.25□□□□□ -0.13
PTPN20-228ENST00000513266 TAF1LQ8IZX4 1826 aa14.25□□□□□ -0.13
PTPN20-228ENST00000513266 MPHOSPH9Q99550 1183 aa14.24□□□□□ -0.13
PTPN20-228ENST00000513266 C5P01031 1676 aa14.23□□□□□ -0.13
PTPN20-228ENST00000513266 KIAA1551Q9HCM1 1747 aa14.22□□□□□ -0.13
PTPN20-228ENST00000513266 FSTL1Q12841 308 aa14.22□□□□□ -0.13
PTPN20-228ENST00000513266 PKD1L3Q7Z443 1732 aa14.21□□□□□ -0.13
PTPN20-228ENST00000513266 NFAT5O94916 1531 aa14.21□□□□□ -0.13
PTPN20-228ENST00000513266 N4BP2Q86UW6 1770 aaPredicted RBP14.21□□□□□ -0.13
PTPN20-228ENST00000513266 IL2RBP14784 551 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms