RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 HAP1P54257 671 aaPredicted RBP16.87■□□□□ 0.29
PDPN-210ENST00000513143 ZC3H6P61129 1189 aaKnown RBP16.87■□□□□ 0.29
PDPN-210ENST00000513143 PPM1GO15355 546 aaPredicted RBP16.86■□□□□ 0.29
PDPN-210ENST00000513143 AMPHP49418 695 aa16.86■□□□□ 0.29
PDPN-210ENST00000513143 COL18A1P39060 1754 aa16.86■□□□□ 0.29
PDPN-210ENST00000513143 RTL1A6NKG5 1358 aa16.86■□□□□ 0.29
PDPN-210ENST00000513143 FLT4P35916 1363 aa16.86■□□□□ 0.29
PDPN-210ENST00000513143 CFAP53Q96M91 514 aa16.85■□□□□ 0.29
PDPN-210ENST00000513143 MRS2Q9HD23 443 aa16.85■□□□□ 0.29
PDPN-210ENST00000513143 ABCC6O95255 1503 aa16.85■□□□□ 0.29
PDPN-210ENST00000513143 KIAA0232Q92628 1395 aa16.85■□□□□ 0.29
PDPN-210ENST00000513143 COL3A1P02461 1466 aaPredicted RBP16.84■□□□□ 0.29
PDPN-210ENST00000513143 SPATA31A6Q5VVP1 1343 aa16.84■□□□□ 0.29
PDPN-210ENST00000513143 HOXC9P31274 260 aa16.84■□□□□ 0.29
PDPN-210ENST00000513143 IP6K1Q92551 441 aa16.84■□□□□ 0.29
PDPN-210ENST00000513143 RGPD5Q99666 1765 aa16.83■□□□□ 0.28
PDPN-210ENST00000513143 HSP90AB2PQ58FF8 381 aa16.82■□□□□ 0.28
PDPN-210ENST00000513143 ZBTB7CA1YPR0 619 aa16.81■□□□□ 0.28
PDPN-210ENST00000513143 PRDM11Q9NQV5 511 aa16.81■□□□□ 0.28
PDPN-210ENST00000513143 LMO7Q8WWI1 1683 aa16.81■□□□□ 0.28
PDPN-210ENST00000513143 BLMP54132 1417 aaPredicted RBP16.81■□□□□ 0.28
PDPN-210ENST00000513143 COL14A1Q05707 1796 aaKnown RBP16.8■□□□□ 0.28
PDPN-210ENST00000513143 NUTM2BA6NNL0 878 aaPredicted RBP16.8■□□□□ 0.28
PDPN-210ENST00000513143 NUTM2EB1AL46 878 aaPredicted RBP16.8■□□□□ 0.28
PDPN-210ENST00000513143 DIAPH1O60610 1272 aaKnown RBP16.8■□□□□ 0.28
PDPN-210ENST00000513143 CHRNA2Q15822 529 aa16.8■□□□□ 0.28
PDPN-210ENST00000513143 NUTM2AQ8IVF1 878 aaPredicted RBP16.8■□□□□ 0.28
PDPN-210ENST00000513143 PNISRQ8TF01 805 aaKnown RBP16.8■□□□□ 0.28
PDPN-210ENST00000513143 AXIN2Q9Y2T1 843 aa16.8■□□□□ 0.28
PDPN-210ENST00000513143 FAM83GA6ND36 823 aa16.79■□□□□ 0.28
PDPN-210ENST00000513143 IL13P35225 146 aa16.78■□□□□ 0.28
PDPN-210ENST00000513143 EIF4A2Q14240 407 aaKnown RBP16.78■□□□□ 0.28
PDPN-210ENST00000513143 CAMTA1Q9Y6Y1 1673 aa16.77■□□□□ 0.28
PDPN-210ENST00000513143 NPM3O75607 178 aaKnown RBP16.77■□□□□ 0.28
PDPN-210ENST00000513143 ADAMTS2O95450 1211 aa16.77■□□□□ 0.28
PDPN-210ENST00000513143 LRP6O75581 1613 aa16.77■□□□□ 0.27
PDPN-210ENST00000513143 NUDCQ9Y266 331 aa16.76■□□□□ 0.27
PDPN-210ENST00000513143 RGPD1P0DJD0 1748 aa16.76■□□□□ 0.27
PDPN-210ENST00000513143 PLCH1Q4KWH8 1693 aa16.75■□□□□ 0.27
PDPN-210ENST00000513143 ERBB3P21860 1342 aa16.75■□□□□ 0.27
PDPN-210ENST00000513143 FAM208AQ9UK61 1670 aaKnown RBP16.74■□□□□ 0.27
PDPN-210ENST00000513143 WDR43Q15061 677 aaKnown RBP eCLIP16.74■□□□□ 0.27
PDPN-210ENST00000513143 ANKRD24Q8TF21 1146 aa16.74■□□□□ 0.27
PDPN-210ENST00000513143 NWD2Q9ULI1 1742 aa16.74■□□□□ 0.27
PDPN-210ENST00000513143 RGPD2P0DJD1 1756 aa16.74■□□□□ 0.27
PDPN-210ENST00000513143 LTV1Q96GA3 475 aaPredicted RBP16.73■□□□□ 0.27
PDPN-210ENST00000513143 COL5A2P05997 1499 aaPredicted RBP16.73■□□□□ 0.27
PDPN-210ENST00000513143 U2SURPO15042 1029 aaKnown RBP16.72■□□□□ 0.27
PDPN-210ENST00000513143 FAM9BQ8IZU0 186 aa16.72■□□□□ 0.27
PDPN-210ENST00000513143 EYA1Q99502 592 aa16.72■□□□□ 0.27
PDPN-210ENST00000513143 BTG4Q9NY30 223 aa16.72■□□□□ 0.27
PDPN-210ENST00000513143 ADAMTS8Q9UP79 889 aa16.72■□□□□ 0.27
PDPN-210ENST00000513143 SLIT2O94813 1529 aa16.72■□□□□ 0.27
PDPN-210ENST00000513143 U2AF1L5P0DN76 240 aaPredicted RBP16.71■□□□□ 0.27
PDPN-210ENST00000513143 U2AF1Q01081 240 aaKnown RBP eCLIP16.71■□□□□ 0.27
PDPN-210ENST00000513143 NRAPQ86VF7 1730 aa16.71■□□□□ 0.27
PDPN-210ENST00000513143 IGSF1Q8N6C5 1336 aa16.71■□□□□ 0.27
PDPN-210ENST00000513143 WDR17Q8IZU2 1322 aa16.7■□□□□ 0.26
PDPN-210ENST00000513143 EVA1CP58658 441 aa16.7■□□□□ 0.26
PDPN-210ENST00000513143 NBPF6Q5VWK0 638 aa16.7■□□□□ 0.26
PDPN-210ENST00000513143 FNBP4Q8N3X1 1017 aaPredicted RBP16.7■□□□□ 0.26
PDPN-210ENST00000513143 NGLY1Q96IV0 654 aa16.7■□□□□ 0.26
PDPN-210ENST00000513143 NBPF4Q96M43 638 aa16.7■□□□□ 0.26
PDPN-210ENST00000513143 NCAPD2Q15021 1401 aa16.69■□□□□ 0.26
PDPN-210ENST00000513143 CSB-PGBD3P0DP91 1061 aa16.69■□□□□ 0.26
PDPN-210ENST00000513143 MEX3CQ5U5Q3 659 aaKnown RBP16.69■□□□□ 0.26
PDPN-210ENST00000513143 C8orf37Q96NL8 207 aa16.69■□□□□ 0.26
PDPN-210ENST00000513143 KDRP35968 1356 aa16.68■□□□□ 0.26
PDPN-210ENST00000513143 FCHSD2O94868 740 aa16.68■□□□□ 0.26
PDPN-210ENST00000513143 STRN4Q9NRL3 753 aa16.68■□□□□ 0.26
PDPN-210ENST00000513143 HMOX1P09601 288 aa16.67■□□□□ 0.26
PDPN-210ENST00000513143 SULT6B1Q6IMI4 303 aa16.67■□□□□ 0.26
PDPN-210ENST00000513143 LARP1Q6PKG0 1096 aaKnown RBP16.67■□□□□ 0.26
PDPN-210ENST00000513143 RSPH6AQ9H0K4 717 aa16.67■□□□□ 0.26
PDPN-210ENST00000513143 NLRP2Q9NX02 1062 aa16.67■□□□□ 0.26
PDPN-210ENST00000513143 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.66■□□□□ 0.26
PDPN-210ENST00000513143 BCL9LQ86UU0 1499 aa16.66■□□□□ 0.26
PDPN-210ENST00000513143 AEBP1Q8IUX7 1158 aa16.66■□□□□ 0.26
PDPN-210ENST00000513143 UNC5CLQ8IV45 518 aa16.66■□□□□ 0.26
PDPN-210ENST00000513143 PNNQ9H307 717 aaKnown RBP16.66■□□□□ 0.26
PDPN-210ENST00000513143 CRB1P82279 1406 aa16.65■□□□□ 0.26
PDPN-210ENST00000513143 TOM1L2Q6ZVM7 507 aa16.65■□□□□ 0.26
PDPN-210ENST00000513143 USHBP1Q8N6Y0 703 aa16.65■□□□□ 0.26
PDPN-210ENST00000513143 PLEKHF1Q96S99 279 aa16.65■□□□□ 0.26
PDPN-210ENST00000513143 CARD10Q9BWT7 1032 aa16.65■□□□□ 0.26
PDPN-210ENST00000513143 AFF2P51816 1311 aa16.63■□□□□ 0.25
PDPN-210ENST00000513143 PRKAR2BP31323 418 aa16.63■□□□□ 0.25
PDPN-210ENST00000513143 RUNDC1Q96C34 613 aa16.63■□□□□ 0.25
PDPN-210ENST00000513143 CCDC146Q8IYE0 955 aa16.62■□□□□ 0.25
PDPN-210ENST00000513143 USP21Q9UK80 565 aa16.62■□□□□ 0.25
PDPN-210ENST00000513143 VPS72Q15906 364 aa16.61■□□□□ 0.25
PDPN-210ENST00000513143 ILDR1Q86SU0 546 aaPredicted RBP16.61■□□□□ 0.25
PDPN-210ENST00000513143 SPATA31A1Q5TZJ5 1347 aa16.6■□□□□ 0.25
PDPN-210ENST00000513143 SPATA31A5Q5VU36 1347 aa16.6■□□□□ 0.25
PDPN-210ENST00000513143 SPATA31A7Q8IWB4 1347 aa16.6■□□□□ 0.25
PDPN-210ENST00000513143 PHACTR3Q96KR7 559 aa16.59■□□□□ 0.25
PDPN-210ENST00000513143 PLEKHG2Q9H7P9 1386 aa16.59■□□□□ 0.25
PDPN-210ENST00000513143 WNK3Q9BYP7 1800 aa16.58■□□□□ 0.25
PDPN-210ENST00000513143 MAPK8IP3Q9UPT6 1336 aa16.58■□□□□ 0.25
PDPN-210ENST00000513143 NEFMP07197 916 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms