RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 LMO7Q8WWI1 1683 aa9.09□□□□□ -0.95
KDM3B-208ENST00000512928 COL5A2P05997 1499 aaPredicted RBP9.08□□□□□ -0.96
KDM3B-208ENST00000512928 EDC4Q6P2E9 1401 aaKnown RBP9.08□□□□□ -0.96
KDM3B-208ENST00000512928 ONECUT3O60422 494 aaPredicted RBP9.08□□□□□ -0.96
KDM3B-208ENST00000512928 R3HDM1Q15032 1099 aaKnown RBP9.08□□□□□ -0.96
KDM3B-208ENST00000512928 TOM1L2Q6ZVM7 507 aa9.08□□□□□ -0.96
KDM3B-208ENST00000512928 CCDC125Q86Z20 511 aa9.08□□□□□ -0.96
KDM3B-208ENST00000512928 NINLQ9Y2I6 1382 aa9.08□□□□□ -0.96
KDM3B-208ENST00000512928 NUP188Q5SRE5 1749 aa9.08□□□□□ -0.96
KDM3B-208ENST00000512928 PDE3BQ13370 1112 aa9.07□□□□□ -0.96
KDM3B-208ENST00000512928 EZH2Q15910 746 aaKnown RBP9.07□□□□□ -0.96
KDM3B-208ENST00000512928 CDCA8Q53HL2 280 aa9.07□□□□□ -0.96
KDM3B-208ENST00000512928 TCP11L2Q8N4U5 519 aa9.07□□□□□ -0.96
KDM3B-208ENST00000512928 AATKQ6ZMQ8 1374 aa9.07□□□□□ -0.96
KDM3B-208ENST00000512928 RREB1Q92766 1687 aa9.07□□□□□ -0.96
KDM3B-208ENST00000512928 CRB1P82279 1406 aa9.06□□□□□ -0.96
KDM3B-208ENST00000512928 PUS7Q96PZ0 661 aaKnown RBP9.06□□□□□ -0.96
KDM3B-208ENST00000512928 NFAT5O94916 1531 aa9.05□□□□□ -0.96
KDM3B-208ENST00000512928 ANKRD36BQ8N2N9 1353 aa9.05□□□□□ -0.96
KDM3B-208ENST00000512928 MAPK8IP2Q13387 824 aaPredicted RBP9.05□□□□□ -0.96
KDM3B-208ENST00000512928 ARHGEF25Q86VW2 580 aa9.05□□□□□ -0.96
KDM3B-208ENST00000512928 COG3Q96JB2 828 aa9.05□□□□□ -0.96
KDM3B-208ENST00000512928 AXIN2Q9Y2T1 843 aa9.05□□□□□ -0.96
KDM3B-208ENST00000512928 WDR17Q8IZU2 1322 aa9.05□□□□□ -0.96
KDM3B-208ENST00000512928 USP31Q70CQ4 1352 aa9.04□□□□□ -0.96
KDM3B-208ENST00000512928 TRIM37O94972 964 aa9.04□□□□□ -0.96
KDM3B-208ENST00000512928 EIF4G2P78344 907 aaKnown RBP eCLIP9.04□□□□□ -0.96
KDM3B-208ENST00000512928 BARGINQ6ZT62 677 aa9.04□□□□□ -0.96
KDM3B-208ENST00000512928 THRAP3Q9Y2W1 955 aaKnown RBP9.04□□□□□ -0.96
KDM3B-208ENST00000512928 LTN1O94822 1766 aa9.04□□□□□ -0.96
KDM3B-208ENST00000512928 BAG6P46379 1132 aa9.03□□□□□ -0.96
KDM3B-208ENST00000512928 COL18A1P39060 1754 aa9.03□□□□□ -0.96
KDM3B-208ENST00000512928 RGPD5Q99666 1765 aa9.03□□□□□ -0.96
KDM3B-208ENST00000512928 OVOS2A0A0J9YW53 1432 aa9.03□□□□□ -0.96
KDM3B-208ENST00000512928 OVOS2Q6IE36 1432 aa9.03□□□□□ -0.96
KDM3B-208ENST00000512928 USP54Q70EL1 1684 aa9.03□□□□□ -0.96
KDM3B-208ENST00000512928 HSPA5P11021 654 aaKnown RBP9.02□□□□□ -0.97
KDM3B-208ENST00000512928 DDB1Q16531 1140 aa9.02□□□□□ -0.97
KDM3B-208ENST00000512928 FAM196AQ6ZSG2 479 aa9.02□□□□□ -0.97
KDM3B-208ENST00000512928 PTF1AQ7RTS3 328 aa9.02□□□□□ -0.97
KDM3B-208ENST00000512928 LTV1Q96GA3 475 aaPredicted RBP9.02□□□□□ -0.97
KDM3B-208ENST00000512928 GGNBP2Q9H3C7 697 aa9.02□□□□□ -0.97
KDM3B-208ENST00000512928 NLRP2Q9NX02 1062 aa9.02□□□□□ -0.97
KDM3B-208ENST00000512928 ABCC6O95255 1503 aa9.01□□□□□ -0.97
KDM3B-208ENST00000512928 MYOM1P52179 1685 aa9.01□□□□□ -0.97
KDM3B-208ENST00000512928 AMPHP49418 695 aa9.01□□□□□ -0.97
KDM3B-208ENST00000512928 ANKRD24Q8TF21 1146 aa9.01□□□□□ -0.97
KDM3B-208ENST00000512928 CAMKK2Q96RR4 588 aa9.01□□□□□ -0.97
KDM3B-208ENST00000512928 CARD10Q9BWT7 1032 aa9.01□□□□□ -0.97
KDM3B-208ENST00000512928 NSD3Q9BZ95 1437 aa9.01□□□□□ -0.97
KDM3B-208ENST00000512928 PARP4Q9UKK3 1724 aaKnown RBP9.01□□□□□ -0.97
KDM3B-208ENST00000512928 LRRC37A3O60309 1634 aa9.01□□□□□ -0.97
KDM3B-208ENST00000512928 KIF20BQ96Q89 1820 aa9.01□□□□□ -0.97
KDM3B-208ENST00000512928 DISP2A7MBM2 1401 aa9□□□□□ -0.97
KDM3B-208ENST00000512928 FBLN1P23142 703 aa9□□□□□ -0.97
KDM3B-208ENST00000512928 SBF2Q86WG5 1849 aa9□□□□□ -0.97
KDM3B-208ENST00000512928 WNK3Q9BYP7 1800 aa9□□□□□ -0.97
KDM3B-208ENST00000512928 ERBB3P21860 1342 aa9□□□□□ -0.97
KDM3B-208ENST00000512928 PEAK1Q9H792 1746 aa9□□□□□ -0.97
KDM3B-208ENST00000512928 CCDC7Q96M83 1385 aa8.99□□□□□ -0.97
KDM3B-208ENST00000512928 FYB1O15117 783 aa8.99□□□□□ -0.97
KDM3B-208ENST00000512928 APBA3O96018 575 aa8.99□□□□□ -0.97
KDM3B-208ENST00000512928 RRS1Q15050 365 aaKnown RBP8.99□□□□□ -0.97
KDM3B-208ENST00000512928 CDCA7Q9BWT1 371 aaPredicted RBP8.99□□□□□ -0.97
KDM3B-208ENST00000512928 PDGFDQ9GZP0 370 aaPredicted RBP8.99□□□□□ -0.97
KDM3B-208ENST00000512928 MAP3K19Q56UN5 1328 aa8.99□□□□□ -0.97
KDM3B-208ENST00000512928 OVOS2A0A0G2JMS6 1433 aa8.98□□□□□ -0.97
KDM3B-208ENST00000512928 EXOC5O00471 708 aa8.98□□□□□ -0.97
KDM3B-208ENST00000512928 PPM1GO15355 546 aaPredicted RBP8.98□□□□□ -0.97
KDM3B-208ENST00000512928 IP6K1Q92551 441 aa8.98□□□□□ -0.97
KDM3B-208ENST00000512928 CARD14Q9BXL6 1004 aa8.98□□□□□ -0.97
KDM3B-208ENST00000512928 SMG6Q86US8 1419 aaKnown RBP8.97□□□□□ -0.97
KDM3B-208ENST00000512928 IL2RBP14784 551 aa8.97□□□□□ -0.97
KDM3B-208ENST00000512928 HOXC9P31274 260 aa8.97□□□□□ -0.97
KDM3B-208ENST00000512928 PPP4R3CPQ6ZMV5 832 aa8.97□□□□□ -0.97
KDM3B-208ENST00000512928 ANO8Q9HCE9 1232 aaPredicted RBP8.97□□□□□ -0.97
KDM3B-208ENST00000512928 CGNL1Q0VF96 1302 aa8.97□□□□□ -0.97
KDM3B-208ENST00000512928 CASZ1Q86V15 1759 aa8.96□□□□□ -0.97
KDM3B-208ENST00000512928 TNNT2P45379 298 aaPredicted RBP8.96□□□□□ -0.98
KDM3B-208ENST00000512928 MARCH10Q8NA82 808 aaPredicted RBP8.96□□□□□ -0.98
KDM3B-208ENST00000512928 FAM208AQ9UK61 1670 aaKnown RBP8.96□□□□□ -0.98
KDM3B-208ENST00000512928 TNS2Q63HR2 1409 aa8.96□□□□□ -0.98
KDM3B-208ENST00000512928 C11orf95C9JLR9 678 aaPredicted RBP8.95□□□□□ -0.98
KDM3B-208ENST00000512928 RTL1A6NKG5 1358 aa8.95□□□□□ -0.98
KDM3B-208ENST00000512928 USHBP1Q8N6Y0 703 aa8.94□□□□□ -0.98
KDM3B-208ENST00000512928 DDX54Q8TDD1 881 aaKnown RBP8.94□□□□□ -0.98
KDM3B-208ENST00000512928 ACSBG1Q96GR2 724 aa8.94□□□□□ -0.98
KDM3B-208ENST00000512928 PANK3Q9H999 370 aa8.94□□□□□ -0.98
KDM3B-208ENST00000512928 EMILIN1Q9Y6C2 1016 aa8.94□□□□□ -0.98
KDM3B-208ENST00000512928 HSP90AB2PQ58FF8 381 aa8.93□□□□□ -0.98
KDM3B-208ENST00000512928 BCL11BQ9C0K0 894 aaPredicted RBP8.93□□□□□ -0.98
KDM3B-208ENST00000512928 FLT4P35916 1363 aa8.93□□□□□ -0.98
KDM3B-208ENST00000512928 RGPD2P0DJD1 1756 aa8.92□□□□□ -0.98
KDM3B-208ENST00000512928 PARD3Q8TEW0 1356 aa8.92□□□□□ -0.98
KDM3B-208ENST00000512928 YY1P25490 414 aa8.92□□□□□ -0.98
KDM3B-208ENST00000512928 RAPGEF4Q8WZA2 1011 aa8.92□□□□□ -0.98
KDM3B-208ENST00000512928 SYTL4Q96C24 671 aaPredicted RBP8.92□□□□□ -0.98
KDM3B-208ENST00000512928 KNSTRNQ9Y448 316 aa8.92□□□□□ -0.98
KDM3B-208ENST00000512928 INSRP06213 1382 aa8.91□□□□□ -0.98
KDM3B-208ENST00000512928 KIF7Q2M1P5 1343 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms