RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 TMEM132EQ6IEE7 984 aa14.47□□□□□ -0.09
CLCN3-208ENST00000512813 WNK3Q9BYP7 1800 aa14.47□□□□□ -0.09
CLCN3-208ENST00000512813 CPDO75976 1380 aa14.47□□□□□ -0.09
CLCN3-208ENST00000512813 TULP4Q9NRJ4 1543 aa14.46□□□□□ -0.09
CLCN3-208ENST00000512813 CRB1P82279 1406 aa14.46□□□□□ -0.09
CLCN3-208ENST00000512813 ARHGEF28Q8N1W1 1705 aaKnown RBP14.46□□□□□ -0.1
CLCN3-208ENST00000512813 PAK3O75914 559 aaPredicted RBP14.45□□□□□ -0.1
CLCN3-208ENST00000512813 PIK3C2GO75747 1445 aa14.44□□□□□ -0.1
CLCN3-208ENST00000512813 TOMM70O94826 608 aa14.44□□□□□ -0.1
CLCN3-208ENST00000512813 ZNF827Q17R98 1081 aa14.44□□□□□ -0.1
CLCN3-208ENST00000512813 MARCH10Q8NA82 808 aaPredicted RBP14.44□□□□□ -0.1
CLCN3-208ENST00000512813 NHSQ6T4R5 1651 aa14.43□□□□□ -0.1
CLCN3-208ENST00000512813 EIF3AQ14152 1382 aaKnown RBP14.43□□□□□ -0.1
CLCN3-208ENST00000512813 ANKRD30BQ9BXX2 1392 aa14.42□□□□□ -0.1
CLCN3-208ENST00000512813 PRR36Q9H6K5 1346 aa14.41□□□□□ -0.1
CLCN3-208ENST00000512813 NGDNQ8NEJ9 315 aaKnown RBP14.4□□□□□ -0.1
CLCN3-208ENST00000512813 PRAM1Q96QH2 718 aa14.39□□□□□ -0.11
CLCN3-208ENST00000512813 TNS2Q63HR2 1409 aa14.39□□□□□ -0.11
CLCN3-208ENST00000512813 HTRA3P83110 453 aa14.38□□□□□ -0.11
CLCN3-208ENST00000512813 APLP2Q06481 763 aa14.38□□□□□ -0.11
CLCN3-208ENST00000512813 SAFB2Q14151 953 aaKnown RBP eCLIP14.38□□□□□ -0.11
CLCN3-208ENST00000512813 TUBGCP6Q96RT7 1819 aa14.37□□□□□ -0.11
CLCN3-208ENST00000512813 PNPLA7Q6ZV29 1317 aa14.37□□□□□ -0.11
CLCN3-208ENST00000512813 BRD4O60885 1362 aaPredicted RBP14.36□□□□□ -0.11
CLCN3-208ENST00000512813 ITSN1Q15811 1721 aa14.36□□□□□ -0.11
CLCN3-208ENST00000512813 NUTM2GQ5VZR2 741 aa14.36□□□□□ -0.11
CLCN3-208ENST00000512813 AKT1S1Q96B36 256 aa14.36□□□□□ -0.11
CLCN3-208ENST00000512813 CDCA7Q9BWT1 371 aaPredicted RBP14.36□□□□□ -0.11
CLCN3-208ENST00000512813 USP19O94966 1318 aa14.36□□□□□ -0.11
CLCN3-208ENST00000512813 CICQ96RK0 1608 aaPredicted RBP14.34□□□□□ -0.11
CLCN3-208ENST00000512813 HSPA1AP0DMV8 641 aaKnown RBP14.34□□□□□ -0.11
CLCN3-208ENST00000512813 HSPA1BP0DMV9 641 aaKnown RBP14.34□□□□□ -0.11
CLCN3-208ENST00000512813 RBM46Q8TBY0 533 aaKnown RBP14.34□□□□□ -0.11
CLCN3-208ENST00000512813 BTAF1O14981 1849 aa14.34□□□□□ -0.11
CLCN3-208ENST00000512813 LRRC4BQ9NT99 713 aa14.33□□□□□ -0.12
CLCN3-208ENST00000512813 SPATA31E1Q6ZUB1 1445 aa14.32□□□□□ -0.12
CLCN3-208ENST00000512813 TRPM1Q7Z4N2 1603 aa14.31□□□□□ -0.12
CLCN3-208ENST00000512813 POGKQ9P215 609 aa14.31□□□□□ -0.12
CLCN3-208ENST00000512813 CD2APQ9Y5K6 639 aa14.31□□□□□ -0.12
CLCN3-208ENST00000512813 FSTL1Q12841 308 aa14.3□□□□□ -0.12
CLCN3-208ENST00000512813 TOM1L2Q6ZVM7 507 aa14.3□□□□□ -0.12
CLCN3-208ENST00000512813 HIRIP3Q9BW71 556 aaPredicted RBP14.3□□□□□ -0.12
CLCN3-208ENST00000512813 C14orf93Q9H972 538 aaKnown RBP14.3□□□□□ -0.12
CLCN3-208ENST00000512813 FAM161AQ3B820 660 aa14.29□□□□□ -0.12
CLCN3-208ENST00000512813 USP6P35125 1406 aa14.29□□□□□ -0.12
CLCN3-208ENST00000512813 WASLO00401 505 aaPredicted RBP14.28□□□□□ -0.12
CLCN3-208ENST00000512813 POLR3AO14802 1390 aaPredicted RBP14.28□□□□□ -0.12
CLCN3-208ENST00000512813 ABCC6O95255 1503 aa14.28□□□□□ -0.12
CLCN3-208ENST00000512813 WDR17Q8IZU2 1322 aa14.28□□□□□ -0.12
CLCN3-208ENST00000512813 NMRK2Q9NPI5 230 aa14.28□□□□□ -0.12
CLCN3-208ENST00000512813 TFCP2L1Q9NZI6 479 aa14.28□□□□□ -0.12
CLCN3-208ENST00000512813 GCP02774 474 aa14.27□□□□□ -0.13
CLCN3-208ENST00000512813 SLC27A3Q5K4L6 730 aa14.27□□□□□ -0.13
CLCN3-208ENST00000512813 COL18A1P39060 1754 aa14.26□□□□□ -0.13
CLCN3-208ENST00000512813 MINK1Q8N4C8 1332 aaPredicted RBP14.25□□□□□ -0.13
CLCN3-208ENST00000512813 EXOC5O00471 708 aa14.25□□□□□ -0.13
CLCN3-208ENST00000512813 RGL3Q3MIN7 710 aa14.25□□□□□ -0.13
CLCN3-208ENST00000512813 ABTB2Q8N961 1025 aa14.25□□□□□ -0.13
CLCN3-208ENST00000512813 ACSBG1Q96GR2 724 aa14.25□□□□□ -0.13
CLCN3-208ENST00000512813 PIK3C2AO00443 1686 aa14.25□□□□□ -0.13
CLCN3-208ENST00000512813 KIAA1210Q9ULL0 1709 aa14.24□□□□□ -0.13
CLCN3-208ENST00000512813 IGSF1Q8N6C5 1336 aa14.23□□□□□ -0.13
CLCN3-208ENST00000512813 CFAP70Q5T0N1 1121 aa14.23□□□□□ -0.13
CLCN3-208ENST00000512813 C16orf71Q8IYS4 520 aaPredicted RBP14.23□□□□□ -0.13
CLCN3-208ENST00000512813 C10orf71Q711Q0 1435 aa14.23□□□□□ -0.13
CLCN3-208ENST00000512813 ADGRB1O14514 1584 aa14.22□□□□□ -0.13
CLCN3-208ENST00000512813 SLIT3O75094 1523 aa14.22□□□□□ -0.13
CLCN3-208ENST00000512813 NLRP13Q86W25 1043 aa14.22□□□□□ -0.13
CLCN3-208ENST00000512813 CARD10Q9BWT7 1032 aa14.22□□□□□ -0.13
CLCN3-208ENST00000512813 NUDT16Q96DE0 195 aaKnown RBP14.21□□□□□ -0.13
CLCN3-208ENST00000512813 ACEP12821 1306 aa14.2□□□□□ -0.14
CLCN3-208ENST00000512813 ZBTB7CA1YPR0 619 aa14.2□□□□□ -0.14
CLCN3-208ENST00000512813 MSL1Q68DK7 614 aa14.2□□□□□ -0.14
CLCN3-208ENST00000512813 LY75O60449 1722 aa14.19□□□□□ -0.14
CLCN3-208ENST00000512813 PPIP5K1Q6PFW1 1433 aa14.19□□□□□ -0.14
CLCN3-208ENST00000512813 ITGAEP38570 1179 aa14.19□□□□□ -0.14
CLCN3-208ENST00000512813 COL23A1Q86Y22 540 aaPredicted RBP14.19□□□□□ -0.14
CLCN3-208ENST00000512813 CCDC7Q96M83 1385 aa14.19□□□□□ -0.14
CLCN3-208ENST00000512813 CPSF1Q10570 1443 aaKnown RBP14.17□□□□□ -0.14
CLCN3-208ENST00000512813 MSH5O43196 834 aa14.17□□□□□ -0.14
CLCN3-208ENST00000512813 PRDM10Q9NQV6 1147 aa14.17□□□□□ -0.14
CLCN3-208ENST00000512813 AXIN2Q9Y2T1 843 aa14.17□□□□□ -0.14
CLCN3-208ENST00000512813 MLLT1Q03111 559 aaPredicted RBP14.16□□□□□ -0.14
CLCN3-208ENST00000512813 SLC4A1APQ9BWU0 796 aaKnown RBP14.16□□□□□ -0.14
CLCN3-208ENST00000512813 PLEKHG2Q9H7P9 1386 aa14.16□□□□□ -0.14
CLCN3-208ENST00000512813 TNRC6CQ9HCJ0 1690 aaKnown RBP14.15□□□□□ -0.14
CLCN3-208ENST00000512813 PXDNLA1KZ92 1463 aa14.15□□□□□ -0.14
CLCN3-208ENST00000512813 KCNQ4P56696 695 aa14.15□□□□□ -0.14
CLCN3-208ENST00000512813 SMC1BQ8NDV3 1235 aa14.15□□□□□ -0.14
CLCN3-208ENST00000512813 RGPD5Q99666 1765 aa14.14□□□□□ -0.15
CLCN3-208ENST00000512813 PLEKHG3A1L390 1219 aa14.14□□□□□ -0.15
CLCN3-208ENST00000512813 TRAK1Q9UPV9 953 aa14.14□□□□□ -0.15
CLCN3-208ENST00000512813 QRICH2Q9H0J4 1663 aa14.14□□□□□ -0.15
CLCN3-208ENST00000512813 PKD1L3Q7Z443 1732 aa14.13□□□□□ -0.15
CLCN3-208ENST00000512813 KAT6BQ8WYB5 2073 aa14.13□□□□□ -0.15
CLCN3-208ENST00000512813 KCPQ6ZWJ8 1503 aa14.12□□□□□ -0.15
CLCN3-208ENST00000512813 USP54Q70EL1 1684 aa14.12□□□□□ -0.15
CLCN3-208ENST00000512813 CSB-PGBD3P0DP91 1061 aa14.12□□□□□ -0.15
CLCN3-208ENST00000512813 FOXN1O15353 648 aa14.11□□□□□ -0.15
CLCN3-208ENST00000512813 RGS19P49795 217 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms