RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 MARVELD3Q96A59 401 aa11.99□□□□□ -0.49
RFC1-214ENST00000512726 ARHGAP9Q9BRR9 750 aa11.99□□□□□ -0.49
RFC1-214ENST00000512726 CHIC2Q9UKJ5 165 aa11.99□□□□□ -0.49
RFC1-214ENST00000512726 BCAMP50895 628 aa11.98□□□□□ -0.49
RFC1-214ENST00000512726 MMP16P51512 607 aa11.98□□□□□ -0.49
RFC1-214ENST00000512726 LSM11P83369 360 aaKnown RBP eCLIP11.98□□□□□ -0.49
RFC1-214ENST00000512726 SWI5Q1ZZU3 235 aa11.98□□□□□ -0.49
RFC1-214ENST00000512726 ADAM32Q8TC27 787 aa11.98□□□□□ -0.49
RFC1-214ENST00000512726 SPSB2Q99619 263 aa11.98□□□□□ -0.49
RFC1-214ENST00000512726 OCSTAMPQ9BR26 566 aa11.98□□□□□ -0.49
RFC1-214ENST00000512726 HRO43593 1189 aa11.97□□□□□ -0.49
RFC1-214ENST00000512726 DPYDQ12882 1025 aa11.97□□□□□ -0.49
RFC1-214ENST00000512726 ZBTB33Q86T24 672 aa11.97□□□□□ -0.49
RFC1-214ENST00000512726 NOD1Q9Y239 953 aa11.97□□□□□ -0.49
RFC1-214ENST00000512726 FAM160A2Q8N612 972 aaPredicted RBP11.96□□□□□ -0.49
RFC1-214ENST00000512726 DNAAF2Q9NVR5 837 aaKnown RBP11.96□□□□□ -0.49
RFC1-214ENST00000512726 SLAIN2Q9P270 581 aa11.96□□□□□ -0.49
RFC1-214ENST00000512726 SOWAHDA6NJG2 315 aa11.95□□□□□ -0.5
RFC1-214ENST00000512726 TRAF7Q6Q0C0 670 aa11.95□□□□□ -0.5
RFC1-214ENST00000512726 DZIP3Q86Y13 1208 aaKnown RBP11.95□□□□□ -0.5
RFC1-214ENST00000512726 ZNF594Q96JF6 807 aaPredicted RBP11.95□□□□□ -0.5
RFC1-214ENST00000512726 RBM47A0AV96 593 aaKnown RBP11.94□□□□□ -0.5
RFC1-214ENST00000512726 LARGE2Q8N3Y3 721 aa11.94□□□□□ -0.5
RFC1-214ENST00000512726 WNT2BQ93097 391 aa11.94□□□□□ -0.5
RFC1-214ENST00000512726 CLDN10P78369 228 aa11.93□□□□□ -0.5
RFC1-214ENST00000512726 DOLKQ9UPQ8 538 aa11.93□□□□□ -0.5
RFC1-214ENST00000512726 RBM19Q9Y4C8 960 aaKnown RBP11.93□□□□□ -0.5
RFC1-214ENST00000512726 SH3BP5LQ7L8J4 393 aa11.91□□□□□ -0.5
RFC1-214ENST00000512726 C1orf216Q8TAB5 229 aa11.91□□□□□ -0.5
RFC1-214ENST00000512726 HS3ST6Q96QI5 342 aa11.91□□□□□ -0.5
RFC1-214ENST00000512726 PRDM9Q9NQV7 894 aa11.91□□□□□ -0.5
RFC1-214ENST00000512726 SERPINB4P48594 390 aa11.9□□□□□ -0.5
RFC1-214ENST00000512726 UNC93B1Q9H1C4 597 aa11.9□□□□□ -0.5
RFC1-214ENST00000512726 COPS2P61201 443 aa11.89□□□□□ -0.51
RFC1-214ENST00000512726 TSGA10IPQ3SY00 556 aa11.89□□□□□ -0.51
RFC1-214ENST00000512726 DNAJC14Q6Y2X3 702 aaPredicted RBP11.89□□□□□ -0.51
RFC1-214ENST00000512726 SIX5Q8N196 739 aa11.89□□□□□ -0.51
RFC1-214ENST00000512726 BIN2Q9UBW5 565 aaPredicted RBP11.89□□□□□ -0.51
RFC1-214ENST00000512726 SEC13P55735 322 aa11.88□□□□□ -0.51
RFC1-214ENST00000512726 MARSP56192 900 aaKnown RBP11.88□□□□□ -0.51
RFC1-214ENST00000512726 OXLD1Q5BKU9 147 aa11.88□□□□□ -0.51
RFC1-214ENST00000512726 CCDC24Q8N4L8 307 aa11.88□□□□□ -0.51
RFC1-214ENST00000512726 UNCXA6NJT0 531 aa11.87□□□□□ -0.51
RFC1-214ENST00000512726 GTF2IP78347 998 aa11.87□□□□□ -0.51
RFC1-214ENST00000512726 RNF20Q5VTR2 975 aa11.87□□□□□ -0.51
RFC1-214ENST00000512726 CCDC85AQ96PX6 553 aaPredicted RBP11.87□□□□□ -0.51
RFC1-214ENST00000512726 CARD14Q9BXL6 1004 aa11.87□□□□□ -0.51
RFC1-214ENST00000512726 WBP1LQ9NX94 342 aa11.87□□□□□ -0.51
RFC1-214ENST00000512726 MAGEB6P1A0A0J9YX57 407 aa11.86□□□□□ -0.51
RFC1-214ENST00000512726 ADH1BP00325 375 aa11.86□□□□□ -0.51
RFC1-214ENST00000512726 ZBTB7BO15156 539 aaPredicted RBP11.85□□□□□ -0.51
RFC1-214ENST00000512726 PRMT3O60678 531 aa11.85□□□□□ -0.51
RFC1-214ENST00000512726 LHX8Q68G74 356 aa11.85□□□□□ -0.51
RFC1-214ENST00000512726 ANKRD13DQ6ZTN6 518 aa11.85□□□□□ -0.51
RFC1-214ENST00000512726 SIRT1Q96EB6 747 aa11.85□□□□□ -0.51
RFC1-214ENST00000512726 POTEB3A0JP26 581 aa11.84□□□□□ -0.51
RFC1-214ENST00000512726 CCDC102BQ68D86 513 aa11.84□□□□□ -0.51
RFC1-214ENST00000512726 POTEBQ6S5H4 581 aa11.84□□□□□ -0.51
RFC1-214ENST00000512726 BPHLQ86WA6 291 aaPredicted RBP11.84□□□□□ -0.51
RFC1-214ENST00000512726 EGFL7Q9UHF1 273 aa11.84□□□□□ -0.51
RFC1-214ENST00000512726 KIAA1024Q9UPX6 916 aa11.84□□□□□ -0.51
RFC1-214ENST00000512726 IGSF3O75054 1194 aa11.83□□□□□ -0.52
RFC1-214ENST00000512726 GIGYF1O75420 1035 aaPredicted RBP11.83□□□□□ -0.52
RFC1-214ENST00000512726 DKK1O94907 266 aa11.83□□□□□ -0.52
RFC1-214ENST00000512726 AGERQ15109 404 aa11.83□□□□□ -0.52
RFC1-214ENST00000512726 PTCRAQ6ISU1 281 aaPredicted RBP11.83□□□□□ -0.52
RFC1-214ENST00000512726 SH3RF1Q7Z6J0 888 aa11.83□□□□□ -0.52
RFC1-214ENST00000512726 CXXC1Q9P0U4 656 aaPredicted RBP11.83□□□□□ -0.52
RFC1-214ENST00000512726 ZPR1O75312 459 aa11.82□□□□□ -0.52
RFC1-214ENST00000512726 PSME1Q06323 249 aa11.82□□□□□ -0.52
RFC1-214ENST00000512726 TPCN2Q8NHX9 752 aa11.82□□□□□ -0.52
RFC1-214ENST00000512726 BCL2L13Q9BXK5 485 aa11.82□□□□□ -0.52
RFC1-214ENST00000512726 ABL1P00519 1130 aa11.81□□□□□ -0.52
RFC1-214ENST00000512726 SCNN1AP37088 669 aa11.81□□□□□ -0.52
RFC1-214ENST00000512726 USP4Q13107 963 aa11.81□□□□□ -0.52
RFC1-214ENST00000512726 ERFEQ4G0M1 354 aa11.81□□□□□ -0.52
RFC1-214ENST00000512726 TAS1R3Q7RTX0 852 aa11.81□□□□□ -0.52
RFC1-214ENST00000512726 CCDC125Q86Z20 511 aa11.81□□□□□ -0.52
RFC1-214ENST00000512726 SLC10A4Q96EP9 437 aa11.81□□□□□ -0.52
RFC1-214ENST00000512726 PRIMPOLQ96LW4 560 aa11.81□□□□□ -0.52
RFC1-214ENST00000512726 TLL1O43897 1013 aa11.8□□□□□ -0.52
RFC1-214ENST00000512726 OCLNQ16625 522 aa11.8□□□□□ -0.52
RFC1-214ENST00000512726 NBPF20Q3BBV1 942 aa11.8□□□□□ -0.52
RFC1-214ENST00000512726 SFI1A8K8P3 1242 aa11.79□□□□□ -0.52
RFC1-214ENST00000512726 NYAP1Q6ZVC0 841 aa11.79□□□□□ -0.52
RFC1-214ENST00000512726 BAP1Q92560 729 aa11.79□□□□□ -0.52
RFC1-214ENST00000512726 MRRFQ96E11 262 aaKnown RBP11.79□□□□□ -0.52
RFC1-214ENST00000512726 SLC6A16Q9GZN6 736 aa11.79□□□□□ -0.52
RFC1-214ENST00000512726 ZNF16P17020 682 aaPredicted RBP11.78□□□□□ -0.52
RFC1-214ENST00000512726 HINFPQ9BQA5 517 aa11.78□□□□□ -0.52
RFC1-214ENST00000512726 PCDHGA11Q9Y5H2 935 aa11.78□□□□□ -0.52
RFC1-214ENST00000512726 NOM1Q5C9Z4 860 aaKnown RBP11.77□□□□□ -0.53
RFC1-214ENST00000512726 SEPT12Q8IYM1 358 aa11.77□□□□□ -0.53
RFC1-214ENST00000512726 CDV3Q9UKY7 258 aaKnown RBP11.77□□□□□ -0.53
RFC1-214ENST00000512726 PCDHB11Q9Y5F2 797 aa11.77□□□□□ -0.53
RFC1-214ENST00000512726 ANKRD33BA6NCL7 494 aa11.76□□□□□ -0.53
RFC1-214ENST00000512726 H3BRB1 525 aa11.76□□□□□ -0.53
RFC1-214ENST00000512726 ICMTO60725 284 aa11.76□□□□□ -0.53
RFC1-214ENST00000512726 GLYCTKQ8IVS8 523 aa11.76□□□□□ -0.53
RFC1-214ENST00000512726 ZNF511Q8NB15 262 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms