RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 C11orf95C9JLR9 678 aaPredicted RBP20.88■□□□□ 0.93
CCHCR1-229ENST00000512418 AXIN2Q9Y2T1 843 aa20.88■□□□□ 0.93
CCHCR1-229ENST00000512418 ABCC6O95255 1503 aa20.87■□□□□ 0.93
CCHCR1-229ENST00000512418 WNK3Q9BYP7 1800 aa20.87■□□□□ 0.93
CCHCR1-229ENST00000512418 CD163L1Q9NR16 1453 aa20.87■□□□□ 0.93
CCHCR1-229ENST00000512418 OVOS2A0A0G2JMS6 1433 aa20.87■□□□□ 0.93
CCHCR1-229ENST00000512418 OVOS2A0A0J9YW53 1432 aa20.87■□□□□ 0.93
CCHCR1-229ENST00000512418 OVOS2Q6IE36 1432 aa20.87■□□□□ 0.93
CCHCR1-229ENST00000512418 SOX12O15370 315 aa20.86■□□□□ 0.93
CCHCR1-229ENST00000512418 R3HDM1Q15032 1099 aaKnown RBP20.86■□□□□ 0.93
CCHCR1-229ENST00000512418 USP54Q70EL1 1684 aa20.86■□□□□ 0.93
CCHCR1-229ENST00000512418 RREB1Q92766 1687 aa20.86■□□□□ 0.93
CCHCR1-229ENST00000512418 PEAK1Q9H792 1746 aa20.85■□□□□ 0.93
CCHCR1-229ENST00000512418 RGPD5Q99666 1765 aa20.85■□□□□ 0.93
CCHCR1-229ENST00000512418 USP31Q70CQ4 1352 aa20.85■□□□□ 0.93
CCHCR1-229ENST00000512418 DDB1Q16531 1140 aa20.84■□□□□ 0.93
CCHCR1-229ENST00000512418 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.83■□□□□ 0.93
CCHCR1-229ENST00000512418 TMC1Q8TDI8 760 aa20.83■□□□□ 0.93
CCHCR1-229ENST00000512418 CDCA7Q9BWT1 371 aaPredicted RBP20.83■□□□□ 0.93
CCHCR1-229ENST00000512418 NUP188Q5SRE5 1749 aa20.82■□□□□ 0.92
CCHCR1-229ENST00000512418 CSB-PGBD3P0DP91 1061 aa20.82■□□□□ 0.92
CCHCR1-229ENST00000512418 HDGFL2Q7Z4V5 671 aaPredicted RBP20.82■□□□□ 0.92
CCHCR1-229ENST00000512418 PUS7Q96PZ0 661 aaKnown RBP20.82■□□□□ 0.92
CCHCR1-229ENST00000512418 EDC4Q6P2E9 1401 aaKnown RBP20.81■□□□□ 0.92
CCHCR1-229ENST00000512418 CARD10Q9BWT7 1032 aa20.81■□□□□ 0.92
CCHCR1-229ENST00000512418 SLC12A5Q9H2X9 1139 aa20.8■□□□□ 0.92
CCHCR1-229ENST00000512418 SBF2Q86WG5 1849 aa20.79■□□□□ 0.92
CCHCR1-229ENST00000512418 NME9Q86XW9 330 aa20.79■□□□□ 0.92
CCHCR1-229ENST00000512418 TERF2IPQ9NYB0 399 aa20.79■□□□□ 0.92
CCHCR1-229ENST00000512418 A0A1W2PP64 1363 aa20.79■□□□□ 0.92
CCHCR1-229ENST00000512418 CCDC7Q96M83 1385 aa20.79■□□□□ 0.92
CCHCR1-229ENST00000512418 RGPD3A6NKT7 1758 aaPredicted RBP20.79■□□□□ 0.92
CCHCR1-229ENST00000512418 RGPD4Q7Z3J3 1758 aa20.79■□□□□ 0.92
CCHCR1-229ENST00000512418 TRIM26Q12899 539 aaPredicted RBP20.78■□□□□ 0.92
CCHCR1-229ENST00000512418 BCL9O00512 1426 aa20.78■□□□□ 0.92
CCHCR1-229ENST00000512418 NINLQ9Y2I6 1382 aa20.77■□□□□ 0.92
CCHCR1-229ENST00000512418 NBPF14Q5TI25 921 aa20.77■□□□□ 0.92
CCHCR1-229ENST00000512418 LTN1O94822 1766 aa20.77■□□□□ 0.91
CCHCR1-229ENST00000512418 SLC24A1O60721 1099 aa20.76■□□□□ 0.91
CCHCR1-229ENST00000512418 TESK2Q96S53 571 aa20.76■□□□□ 0.91
CCHCR1-229ENST00000512418 MARCH10Q8NA82 808 aaPredicted RBP20.75■□□□□ 0.91
CCHCR1-229ENST00000512418 ERBB3P21860 1342 aa20.75■□□□□ 0.91
CCHCR1-229ENST00000512418 ST20-MTHFSA0A0A6YYL1 179 aa20.74■□□□□ 0.91
CCHCR1-229ENST00000512418 PLSCR1O15162 318 aa20.74■□□□□ 0.91
CCHCR1-229ENST00000512418 TNS2Q63HR2 1409 aa20.74■□□□□ 0.91
CCHCR1-229ENST00000512418 BCL11BQ9C0K0 894 aaPredicted RBP20.74■□□□□ 0.91
CCHCR1-229ENST00000512418 EXOC5O00471 708 aa20.72■□□□□ 0.91
CCHCR1-229ENST00000512418 NLRP2Q9NX02 1062 aa20.7■□□□□ 0.9
CCHCR1-229ENST00000512418 PTF1AQ7RTS3 328 aa20.69■□□□□ 0.9
CCHCR1-229ENST00000512418 ANKRD24Q8TF21 1146 aa20.68■□□□□ 0.9
CCHCR1-229ENST00000512418 IL2RBP14784 551 aa20.66■□□□□ 0.9
CCHCR1-229ENST00000512418 ANKRD36BQ8N2N9 1353 aa20.66■□□□□ 0.9
CCHCR1-229ENST00000512418 USP47Q96K76 1375 aa20.66■□□□□ 0.9
CCHCR1-229ENST00000512418 FAM208AQ9UK61 1670 aaKnown RBP20.65■□□□□ 0.9
CCHCR1-229ENST00000512418 IP6K1Q92551 441 aa20.65■□□□□ 0.9
CCHCR1-229ENST00000512418 COG3Q96JB2 828 aa20.65■□□□□ 0.9
CCHCR1-229ENST00000512418 NHSQ6T4R5 1651 aa20.64■□□□□ 0.9
CCHCR1-229ENST00000512418 TMF1P82094 1093 aa20.64■□□□□ 0.89
CCHCR1-229ENST00000512418 ANO8Q9HCE9 1232 aaPredicted RBP20.63■□□□□ 0.89
CCHCR1-229ENST00000512418 PROM2Q8N271 834 aa20.62■□□□□ 0.89
CCHCR1-229ENST00000512418 SPON1Q9HCB6 807 aa20.62■□□□□ 0.89
CCHCR1-229ENST00000512418 MAP3K19Q56UN5 1328 aa20.6■□□□□ 0.89
CCHCR1-229ENST00000512418 KCNQ2O43526 872 aa20.6■□□□□ 0.89
CCHCR1-229ENST00000512418 TXNRD1Q16881 649 aa20.6■□□□□ 0.89
CCHCR1-229ENST00000512418 CASZ1Q86V15 1759 aa20.59■□□□□ 0.89
CCHCR1-229ENST00000512418 HOXC9P31274 260 aa20.58■□□□□ 0.89
CCHCR1-229ENST00000512418 CDCA8Q53HL2 280 aa20.58■□□□□ 0.89
CCHCR1-229ENST00000512418 LTV1Q96GA3 475 aaPredicted RBP20.58■□□□□ 0.89
CCHCR1-229ENST00000512418 ACSBG1Q96GR2 724 aa20.58■□□□□ 0.89
CCHCR1-229ENST00000512418 AMPHP49418 695 aa20.57■□□□□ 0.88
CCHCR1-229ENST00000512418 PPP1R1BQ9UD71 204 aaPredicted RBP20.57■□□□□ 0.88
CCHCR1-229ENST00000512418 RTL1A6NKG5 1358 aa20.57■□□□□ 0.88
CCHCR1-229ENST00000512418 STK32BQ9NY57 414 aa20.56■□□□□ 0.88
CCHCR1-229ENST00000512418 TIMELESSQ9UNS1 1208 aa20.56■□□□□ 0.88
CCHCR1-229ENST00000512418 FYB1O15117 783 aa20.55■□□□□ 0.88
CCHCR1-229ENST00000512418 BTAF1O14981 1849 aa20.55■□□□□ 0.88
CCHCR1-229ENST00000512418 FBLN1P23142 703 aa20.54■□□□□ 0.88
CCHCR1-229ENST00000512418 GGNBP2Q9H3C7 697 aa20.54■□□□□ 0.88
CCHCR1-229ENST00000512418 CLSPNQ9HAW4 1339 aa20.53■□□□□ 0.88
CCHCR1-229ENST00000512418 SLC15A2Q16348 729 aa20.53■□□□□ 0.88
CCHCR1-229ENST00000512418 KIF20BQ96Q89 1820 aa20.53■□□□□ 0.88
CCHCR1-229ENST00000512418 RRS1Q15050 365 aaKnown RBP20.52■□□□□ 0.88
CCHCR1-229ENST00000512418 PDGFDQ9GZP0 370 aaPredicted RBP20.52■□□□□ 0.88
CCHCR1-229ENST00000512418 DDX54Q8TDD1 881 aaKnown RBP20.51■□□□□ 0.87
CCHCR1-229ENST00000512418 PAPPAQ13219 1627 aa20.51■□□□□ 0.87
CCHCR1-229ENST00000512418 RGPD2P0DJD1 1756 aa20.51■□□□□ 0.87
CCHCR1-229ENST00000512418 MYOM1P52179 1685 aa20.51■□□□□ 0.87
CCHCR1-229ENST00000512418 KAT6BQ8WYB5 2073 aa20.5■□□□□ 0.87
CCHCR1-229ENST00000512418 SMG6Q86US8 1419 aaKnown RBP20.5■□□□□ 0.87
CCHCR1-229ENST00000512418 MEGF6O75095 1541 aa20.49■□□□□ 0.87
CCHCR1-229ENST00000512418 ZBTB7AO95365 584 aa20.49■□□□□ 0.87
CCHCR1-229ENST00000512418 SHANK3Q9BYB0 1731 aa20.48■□□□□ 0.87
CCHCR1-229ENST00000512418 KIF24Q5T7B8 1368 aa20.47■□□□□ 0.87
CCHCR1-229ENST00000512418 DOT1LQ8TEK3 1739 aa20.47■□□□□ 0.87
CCHCR1-229ENST00000512418 FLT4P35916 1363 aa20.46■□□□□ 0.87
CCHCR1-229ENST00000512418 NSD3Q9BZ95 1437 aa20.46■□□□□ 0.87
CCHCR1-229ENST00000512418 PTGER2P43116 358 aa20.46■□□□□ 0.87
CCHCR1-229ENST00000512418 ZCRB1Q8TBF4 217 aaKnown RBP20.46■□□□□ 0.87
CCHCR1-229ENST00000512418 CGNL1Q0VF96 1302 aa20.46■□□□□ 0.87
CCHCR1-229ENST00000512418 INSRP06213 1382 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms