RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	CDCA7	Q9BWT1	371 aa	Predicted RBP	10.17	□□□□□ -0.78
NR1I3-231	ENST00000512340	CARD14	Q9BXL6	1004 aa		10.17	□□□□□ -0.78
NR1I3-231	ENST00000512340	THRAP3	Q9Y2W1	955 aa	Known RBP	10.17	□□□□□ -0.78
NR1I3-231	ENST00000512340	ABCC6	O95255	1503 aa		10.17	□□□□□ -0.78
NR1I3-231	ENST00000512340	SMG6	Q86US8	1419 aa	Known RBP	10.16	□□□□□ -0.78
NR1I3-231	ENST00000512340	SF3B2	Q13435	895 aa	Known RBP	10.16	□□□□□ -0.78
NR1I3-231	ENST00000512340	MORC1	Q86VD1	984 aa		10.16	□□□□□ -0.78
NR1I3-231	ENST00000512340	OVOS2	A0A0J9YW53	1432 aa		10.16	□□□□□ -0.78
NR1I3-231	ENST00000512340	OVOS2	Q6IE36	1432 aa		10.16	□□□□□ -0.78
NR1I3-231	ENST00000512340	PLCH1	Q4KWH8	1693 aa		10.15	□□□□□ -0.78
NR1I3-231	ENST00000512340	KIF24	Q5T7B8	1368 aa		10.15	□□□□□ -0.78
NR1I3-231	ENST00000512340	SPATA31A5	Q5VU36	1347 aa		10.15	□□□□□ -0.78
NR1I3-231	ENST00000512340	SPATA31A7	Q8IWB4	1347 aa		10.15	□□□□□ -0.78
NR1I3-231	ENST00000512340	C11orf95	C9JLR9	678 aa	Predicted RBP	10.15	□□□□□ -0.78
NR1I3-231	ENST00000512340	TCP11L2	Q8N4U5	519 aa		10.15	□□□□□ -0.78
NR1I3-231	ENST00000512340	IP6K1	Q92551	441 aa		10.15	□□□□□ -0.78
NR1I3-231	ENST00000512340	USP54	Q70EL1	1684 aa		10.15	□□□□□ -0.79
NR1I3-231	ENST00000512340	LRP5	O75197	1615 aa		10.15	□□□□□ -0.79
NR1I3-231	ENST00000512340	RTL1	A6NKG5	1358 aa		10.14	□□□□□ -0.79
NR1I3-231	ENST00000512340	WASHC2A	Q641Q2	1341 aa		10.14	□□□□□ -0.79
NR1I3-231	ENST00000512340	WDR17	Q8IZU2	1322 aa		10.14	□□□□□ -0.79
NR1I3-231	ENST00000512340	CRYBG1	Q9Y4K1	1723 aa		10.14	□□□□□ -0.79
NR1I3-231	ENST00000512340	MYOM1	P52179	1685 aa		10.14	□□□□□ -0.79
NR1I3-231	ENST00000512340	SPATA31A1	Q5TZJ5	1347 aa		10.13	□□□□□ -0.79
NR1I3-231	ENST00000512340	KIF20B	Q96Q89	1820 aa		10.13	□□□□□ -0.79
NR1I3-231	ENST00000512340	PPM1G	O15355	546 aa	Predicted RBP	10.13	□□□□□ -0.79
NR1I3-231	ENST00000512340	PDE3B	Q13370	1112 aa		10.13	□□□□□ -0.79
NR1I3-231	ENST00000512340	FAM98C	Q17RN3	349 aa	Known RBP	10.13	□□□□□ -0.79
NR1I3-231	ENST00000512340	BARGIN	Q6ZT62	677 aa		10.13	□□□□□ -0.79
NR1I3-231	ENST00000512340	NLRP2	Q9NX02	1062 aa		10.13	□□□□□ -0.79
NR1I3-231	ENST00000512340	USP35	Q9P2H5	1018 aa		10.13	□□□□□ -0.79
NR1I3-231	ENST00000512340	CRB1	P82279	1406 aa		10.13	□□□□□ -0.79
NR1I3-231	ENST00000512340	NFAT5	O94916	1531 aa		10.12	□□□□□ -0.79
NR1I3-231	ENST00000512340	MAP3K19	Q56UN5	1328 aa		10.12	□□□□□ -0.79
NR1I3-231	ENST00000512340	ONECUT3	O60422	494 aa	Predicted RBP	10.12	□□□□□ -0.79
NR1I3-231	ENST00000512340	LARP1	Q6PKG0	1096 aa	Known RBP	10.12	□□□□□ -0.79
NR1I3-231	ENST00000512340	SEPT12	Q8IYM1	358 aa		10.12	□□□□□ -0.79
NR1I3-231	ENST00000512340	ANKRD24	Q8TF21	1146 aa		10.12	□□□□□ -0.79
NR1I3-231	ENST00000512340	CARD10	Q9BWT7	1032 aa		10.12	□□□□□ -0.79
NR1I3-231	ENST00000512340	FLT4	P35916	1363 aa		10.12	□□□□□ -0.79
NR1I3-231	ENST00000512340	COL5A2	P05997	1499 aa	Predicted RBP	10.11	□□□□□ -0.79
NR1I3-231	ENST00000512340	HOXC9	P31274	260 aa		10.11	□□□□□ -0.79
NR1I3-231	ENST00000512340	TNNT2	P45379	298 aa	Predicted RBP	10.11	□□□□□ -0.79
NR1I3-231	ENST00000512340	KRT27	Q7Z3Y8	459 aa		10.11	□□□□□ -0.79
NR1I3-231	ENST00000512340	CAMTA1	Q9Y6Y1	1673 aa		10.11	□□□□□ -0.79
NR1I3-231	ENST00000512340	NPC1L1	Q9UHC9	1359 aa		10.11	□□□□□ -0.79
NR1I3-231	ENST00000512340	ERBB3	P21860	1342 aa		10.1	□□□□□ -0.79
NR1I3-231	ENST00000512340	RRS1	Q15050	365 aa	Known RBP	10.1	□□□□□ -0.79
NR1I3-231	ENST00000512340	LTV1	Q96GA3	475 aa	Predicted RBP	10.1	□□□□□ -0.79
NR1I3-231	ENST00000512340	AXIN2	Q9Y2T1	843 aa		10.1	□□□□□ -0.79
NR1I3-231	ENST00000512340	EXOC5	O00471	708 aa		10.09	□□□□□ -0.79
NR1I3-231	ENST00000512340	CFAP53	Q96M91	514 aa		10.09	□□□□□ -0.79
NR1I3-231	ENST00000512340	DAXX	Q9UER7	740 aa	Predicted RBP	10.09	□□□□□ -0.79
NR1I3-231	ENST00000512340	NRAP	Q86VF7	1730 aa		10.09	□□□□□ -0.79
NR1I3-231	ENST00000512340	INSR	P06213	1382 aa		10.09	□□□□□ -0.79
NR1I3-231	ENST00000512340	LMO7	Q8WWI1	1683 aa		10.09	□□□□□ -0.79
NR1I3-231	ENST00000512340	LTN1	O94822	1766 aa		10.09	□□□□□ -0.79
NR1I3-231	ENST00000512340	DDB1	Q16531	1140 aa		10.08	□□□□□ -0.8
NR1I3-231	ENST00000512340	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.08	□□□□□ -0.8
NR1I3-231	ENST00000512340	CC2D1B	Q5T0F9	858 aa	Known RBP	10.08	□□□□□ -0.8
NR1I3-231	ENST00000512340	RAPGEF4	Q8WZA2	1011 aa		10.08	□□□□□ -0.8
NR1I3-231	ENST00000512340	GLI3	P10071	1580 aa		10.07	□□□□□ -0.8
NR1I3-231	ENST00000512340	PER1	O15534	1290 aa	Predicted RBP	10.07	□□□□□ -0.8
NR1I3-231	ENST00000512340	IL2RB	P14784	551 aa		10.07	□□□□□ -0.8
NR1I3-231	ENST00000512340	BAG6	P46379	1132 aa		10.07	□□□□□ -0.8
NR1I3-231	ENST00000512340	FAM196A	Q6ZSG2	479 aa		10.07	□□□□□ -0.8
NR1I3-231	ENST00000512340	POLK	Q9UBT6	870 aa		10.07	□□□□□ -0.8
NR1I3-231	ENST00000512340	ANKRD26	Q9UPS8	1709 aa		10.07	□□□□□ -0.8
NR1I3-231	ENST00000512340	COL18A1	P39060	1754 aa		10.06	□□□□□ -0.8
NR1I3-231	ENST00000512340	TAT	P17735	454 aa	Predicted RBP	10.06	□□□□□ -0.8
NR1I3-231	ENST00000512340	CNGB1	Q14028	1251 aa	Predicted RBP	10.06	□□□□□ -0.8
NR1I3-231	ENST00000512340	HSP90AB2P	Q58FF8	381 aa		10.06	□□□□□ -0.8
NR1I3-231	ENST00000512340	EMILIN1	Q9Y6C2	1016 aa		10.06	□□□□□ -0.8
NR1I3-231	ENST00000512340	FAM208A	Q9UK61	1670 aa	Known RBP	10.06	□□□□□ -0.8
NR1I3-231	ENST00000512340	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.05	□□□□□ -0.8
NR1I3-231	ENST00000512340	DDX10	Q13206	875 aa	Known RBP	10.05	□□□□□ -0.8
NR1I3-231	ENST00000512340	NUDC	Q9Y266	331 aa		10.05	□□□□□ -0.8
NR1I3-231	ENST00000512340	MAP2	P11137	1827 aa	Known RBP	10.05	□□□□□ -0.8
NR1I3-231	ENST00000512340	FBLN1	P23142	703 aa		10.04	□□□□□ -0.8
NR1I3-231	ENST00000512340	BRWD3	Q6RI45	1802 aa		10.03	□□□□□ -0.8
NR1I3-231	ENST00000512340	HMGB2	P26583	209 aa	Known RBP	10.03	□□□□□ -0.8
NR1I3-231	ENST00000512340	MTHFS	P49914	203 aa		10.03	□□□□□ -0.8
NR1I3-231	ENST00000512340	RALBP1	Q15311	655 aa		10.03	□□□□□ -0.8
NR1I3-231	ENST00000512340	DEFB132	Q7Z7B7	95 aa		10.03	□□□□□ -0.8
NR1I3-231	ENST00000512340	RGPD5	Q99666	1765 aa		10.03	□□□□□ -0.8
NR1I3-231	ENST00000512340	OVOS2	A0A0G2JMS6	1433 aa		10.02	□□□□□ -0.81
NR1I3-231	ENST00000512340	DISP2	A7MBM2	1401 aa		10.02	□□□□□ -0.81
NR1I3-231	ENST00000512340	DIAPH1	O60610	1272 aa	Known RBP	10.02	□□□□□ -0.81
NR1I3-231	ENST00000512340	NEFM	P07197	916 aa		10.02	□□□□□ -0.81
NR1I3-231	ENST00000512340	ZCRB1	Q8TBF4	217 aa	Known RBP	10.02	□□□□□ -0.81
NR1I3-231	ENST00000512340	SPG7	Q9UQ90	795 aa		10.02	□□□□□ -0.81
NR1I3-231	ENST00000512340	RGPD1	P0DJD0	1748 aa		10.02	□□□□□ -0.81
NR1I3-231	ENST00000512340	PARD3	Q8TEW0	1356 aa		10.01	□□□□□ -0.81
NR1I3-231	ENST00000512340	NBPF6	Q5VWK0	638 aa		10.01	□□□□□ -0.81
NR1I3-231	ENST00000512340	NBPF4	Q96M43	638 aa		10.01	□□□□□ -0.81
NR1I3-231	ENST00000512340	PLEKHG2	Q9H7P9	1386 aa		10.01	□□□□□ -0.81
NR1I3-231	ENST00000512340	THSD7A	Q9UPZ6	1657 aa		10	□□□□□ -0.81
NR1I3-231	ENST00000512340	EIF4A2	Q14240	407 aa	Known RBP	10	□□□□□ -0.81
NR1I3-231	ENST00000512340	AMOT	Q4VCS5	1084 aa		10	□□□□□ -0.81
NR1I3-231	ENST00000512340	DDX54	Q8TDD1	881 aa	Known RBP	10	□□□□□ -0.81

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