RNA–Protein interactions for RNA: ENST00000512331.5

RUFY3-210, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 3

Gene RUFY3, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-210ENST00000512331 CCNYL3P0C7X3 344 aa10.19□□□□□ -0.78
RUFY3-210ENST00000512331 RBM25P49756 843 aaKnown RBP10.19□□□□□ -0.78
RUFY3-210ENST00000512331 PTK2Q05397 1052 aa10.19□□□□□ -0.78
RUFY3-210ENST00000512331 DEPDC4Q8N2C3 294 aa10.19□□□□□ -0.78
RUFY3-210ENST00000512331 FAM174AQ8TBP5 190 aa10.19□□□□□ -0.78
RUFY3-210ENST00000512331 STK32AQ8WU08 396 aa10.19□□□□□ -0.78
RUFY3-210ENST00000512331 GNEQ9Y223 722 aaKnown RBP10.19□□□□□ -0.78
RUFY3-210ENST00000512331 CUX2O14529 1486 aa10.18□□□□□ -0.78
RUFY3-210ENST00000512331 RAD54L2Q9Y4B4 1467 aa10.18□□□□□ -0.78
RUFY3-210ENST00000512331 HRO43593 1189 aa10.18□□□□□ -0.78
RUFY3-210ENST00000512331 BCAMP50895 628 aa10.18□□□□□ -0.78
RUFY3-210ENST00000512331 SLFNL1Q499Z3 407 aa10.18□□□□□ -0.78
RUFY3-210ENST00000512331 MSS51Q4VC12 460 aa10.18□□□□□ -0.78
RUFY3-210ENST00000512331 GPKOWQ92917 476 aaPredicted RBP eCLIP10.18□□□□□ -0.78
RUFY3-210ENST00000512331 ABCA10Q8WWZ4 1543 aa10.17□□□□□ -0.78
RUFY3-210ENST00000512331 KIF27Q86VH2 1401 aa10.17□□□□□ -0.78
RUFY3-210ENST00000512331 FAM196BA6NMK8 535 aa10.17□□□□□ -0.78
RUFY3-210ENST00000512331 MCCD1P59942 119 aaPredicted RBP10.17□□□□□ -0.78
RUFY3-210ENST00000512331 NBPF14Q5TI25 921 aa10.17□□□□□ -0.78
RUFY3-210ENST00000512331 PDXDC2PQ6P474 469 aa10.17□□□□□ -0.78
RUFY3-210ENST00000512331 HS3ST6Q96QI5 342 aa10.17□□□□□ -0.78
RUFY3-210ENST00000512331 PCDHB9Q9Y5E1 797 aa10.17□□□□□ -0.78
RUFY3-210ENST00000512331 ERICH3Q5RHP9 1530 aa10.17□□□□□ -0.78
RUFY3-210ENST00000512331 USP17L15C9J2P7 530 aa10.16□□□□□ -0.78
RUFY3-210ENST00000512331 USP17L10C9JJH3 530 aa10.16□□□□□ -0.78
RUFY3-210ENST00000512331 USP17L13C9JLJ4 530 aa10.16□□□□□ -0.78
RUFY3-210ENST00000512331 USP17L12C9JPN9 530 aa10.16□□□□□ -0.78
RUFY3-210ENST00000512331 USP17L11C9JVI0 530 aa10.16□□□□□ -0.78
RUFY3-210ENST00000512331 USP17L21D6R901 530 aa10.16□□□□□ -0.78
RUFY3-210ENST00000512331 USP17L18D6R9N7 530 aa10.16□□□□□ -0.78
RUFY3-210ENST00000512331 USP17L22D6RA61 530 aa10.16□□□□□ -0.78
RUFY3-210ENST00000512331 USP17L17D6RBQ6 530 aa10.16□□□□□ -0.78
RUFY3-210ENST00000512331 USP17L19D6RCP7 530 aa10.16□□□□□ -0.78
RUFY3-210ENST00000512331 USP17L20D6RJB6 530 aa10.16□□□□□ -0.78
RUFY3-210ENST00000512331 DXOO77932 396 aaKnown RBP10.16□□□□□ -0.78
RUFY3-210ENST00000512331 USP17L24Q0WX57 530 aa10.16□□□□□ -0.78
RUFY3-210ENST00000512331 LARP1Q6PKG0 1096 aaKnown RBP10.16□□□□□ -0.78
RUFY3-210ENST00000512331 RNF135Q8IUD6 432 aa10.16□□□□□ -0.78
RUFY3-210ENST00000512331 NUDT12Q9BQG2 462 aa10.16□□□□□ -0.78
RUFY3-210ENST00000512331 EVA1BQ9NVM1 165 aa10.16□□□□□ -0.78
RUFY3-210ENST00000512331 CEP126Q9P2H0 1117 aa10.16□□□□□ -0.78
RUFY3-210ENST00000512331 MKRN1Q9UHC7 482 aaKnown RBP10.16□□□□□ -0.78
RUFY3-210ENST00000512331 CUL7Q14999 1698 aa10.15□□□□□ -0.78
RUFY3-210ENST00000512331 KCNH2Q12809 1159 aa10.15□□□□□ -0.78
RUFY3-210ENST00000512331 CCER1Q8TC90 406 aaPredicted RBP10.15□□□□□ -0.78
RUFY3-210ENST00000512331 ZNF428Q96B54 188 aa10.15□□□□□ -0.78
RUFY3-210ENST00000512331 ERCC6Q03468 1493 aa10.15□□□□□ -0.78
RUFY3-210ENST00000512331 RAPGEF2Q9Y4G8 1499 aa10.15□□□□□ -0.78
RUFY3-210ENST00000512331 CTTNBP2Q8WZ74 1663 aa10.15□□□□□ -0.79
RUFY3-210ENST00000512331 ATP5J2-PTCD1G3V325 749 aa10.14□□□□□ -0.79
RUFY3-210ENST00000512331 NCOA4Q13772 614 aa10.14□□□□□ -0.79
RUFY3-210ENST00000512331 CRTC2Q53ET0 693 aaPredicted RBP10.14□□□□□ -0.79
RUFY3-210ENST00000512331 WNT2BQ93097 391 aa10.14□□□□□ -0.79
RUFY3-210ENST00000512331 LZTS3O60299 673 aaPredicted RBP10.13□□□□□ -0.79
RUFY3-210ENST00000512331 RASA1P20936 1047 aa10.13□□□□□ -0.79
RUFY3-210ENST00000512331 PLPP7Q8NBV4 271 aa10.13□□□□□ -0.79
RUFY3-210ENST00000512331 SPSB2Q99619 263 aa10.13□□□□□ -0.79
RUFY3-210ENST00000512331 PRXQ9BXM0 1461 aa10.12□□□□□ -0.79
RUFY3-210ENST00000512331 MMP16P51512 607 aa10.12□□□□□ -0.79
RUFY3-210ENST00000512331 FAM200AQ8TCP9 573 aa10.12□□□□□ -0.79
RUFY3-210ENST00000512331 OCSTAMPQ9BR26 566 aa10.12□□□□□ -0.79
RUFY3-210ENST00000512331 POTEB3A0JP26 581 aa10.11□□□□□ -0.79
RUFY3-210ENST00000512331 PTK7Q13308 1070 aa10.11□□□□□ -0.79
RUFY3-210ENST00000512331 POTEBQ6S5H4 581 aa10.11□□□□□ -0.79
RUFY3-210ENST00000512331 FAM160A2Q8N612 972 aaPredicted RBP10.11□□□□□ -0.79
RUFY3-210ENST00000512331 ADAM32Q8TC27 787 aa10.11□□□□□ -0.79
RUFY3-210ENST00000512331 ARHGAP9Q9BRR9 750 aa10.11□□□□□ -0.79
RUFY3-210ENST00000512331 AMOTL2Q9Y2J4 779 aa10.11□□□□□ -0.79
RUFY3-210ENST00000512331 EML3Q32P44 896 aa10.1□□□□□ -0.79
RUFY3-210ENST00000512331 MAP7D1Q3KQU3 841 aa10.1□□□□□ -0.79
RUFY3-210ENST00000512331 TXNDC2Q86VQ3 553 aa10.1□□□□□ -0.79
RUFY3-210ENST00000512331 PHTF2Q8N3S3 785 aa10.1□□□□□ -0.79
RUFY3-210ENST00000512331 PRDM9Q9NQV7 894 aa10.1□□□□□ -0.79
RUFY3-210ENST00000512331 EIF4G3O43432 1585 aaKnown RBP10.09□□□□□ -0.79
RUFY3-210ENST00000512331 PHLDB3Q6NSJ2 640 aa10.09□□□□□ -0.79
RUFY3-210ENST00000512331 ANKRD13DQ6ZTN6 518 aa10.09□□□□□ -0.79
RUFY3-210ENST00000512331 ZBTB33Q86T24 672 aa10.09□□□□□ -0.79
RUFY3-210ENST00000512331 ANKMY2Q8IV38 441 aa10.09□□□□□ -0.79
RUFY3-210ENST00000512331 CDCA7Q9BWT1 371 aaPredicted RBP10.09□□□□□ -0.79
RUFY3-210ENST00000512331 WBP1LQ9NX94 342 aa10.09□□□□□ -0.79
RUFY3-210ENST00000512331 TNIKQ9UKE5 1360 aa10.09□□□□□ -0.79
RUFY3-210ENST00000512331 CEP162Q5TB80 1403 aa10.08□□□□□ -0.8
RUFY3-210ENST00000512331 E9PSI1 815 aa10.08□□□□□ -0.8
RUFY3-210ENST00000512331 SSFA2P28290 1259 aa10.08□□□□□ -0.8
RUFY3-210ENST00000512331 COPS2P61201 443 aa10.08□□□□□ -0.8
RUFY3-210ENST00000512331 CLP1Q92989 425 aaKnown RBP10.08□□□□□ -0.8
RUFY3-210ENST00000512331 ARID4AP29374 1257 aaPredicted RBP10.07□□□□□ -0.8
RUFY3-210ENST00000512331 TRIM50Q86XT4 487 aa10.07□□□□□ -0.8
RUFY3-210ENST00000512331 CHIC2Q9UKJ5 165 aa10.07□□□□□ -0.8
RUFY3-210ENST00000512331 ADAMTS12P58397 1594 aa10.06□□□□□ -0.8
RUFY3-210ENST00000512331 FAM69CQ0P6D2 419 aa10.06□□□□□ -0.8
RUFY3-210ENST00000512331 LHX8Q68G74 356 aa10.06□□□□□ -0.8
RUFY3-210ENST00000512331 DZIP3Q86Y13 1208 aaKnown RBP10.06□□□□□ -0.8
RUFY3-210ENST00000512331 OGFOD1Q8N543 542 aa10.06□□□□□ -0.8
RUFY3-210ENST00000512331 UNC93B1Q9H1C4 597 aa10.06□□□□□ -0.8
RUFY3-210ENST00000512331 MYT1LQ9UL68 1186 aa10.06□□□□□ -0.8
RUFY3-210ENST00000512331 GAPVD1Q14C86 1478 aa10.05□□□□□ -0.8
RUFY3-210ENST00000512331 IFT140Q96RY7 1462 aa10.05□□□□□ -0.8
RUFY3-210ENST00000512331 ATP1A2P50993 1020 aa10.05□□□□□ -0.8
RUFY3-210ENST00000512331 TRAF7Q6Q0C0 670 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms